CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BURP6 (3-isopropylmalate dehydratase large subunit OS=Burkholderia pseudomallei (strain 668) GN=leuC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 72/251 (28.69%), Postives = 104/251 (41.43%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD------------------------NRALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 V D TT +YL+ + +P ++ SDE A F D +++ P V SP+ RALA + +K+D+++IGSCT + ED AAA V ++V L + VPGSG + ++F EAG + P C CL D R+ C ST+NRNF GR G + G+ +L SP AAA+A+ G+ D R Sbjct: 233 VAVDDTTVEYLKGRPFVPTGAEWDQAVEYWKTFRSDEGAQFDRVVELDAAQIVPQVTWGTSPEMVTSIDGRVPDPEREKDPVKRDAMERALAYMALAPNTPIEAIKVDKIFIGSCTNARIEDIRAAAYVVKKLNRRVAPNVRL------------AMVVPGSGLVKAQAEREGLDKVFTEAGFEW-REPGCSMCLAMNAD---RLEPGERCASTSNRNFEGRQG-QGGRTHLVSPAMAAAAAIEGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BURP1 (3-isopropylmalate dehydratase large subunit OS=Burkholderia pseudomallei (strain 1710b) GN=leuC PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 72/251 (28.69%), Postives = 104/251 (41.43%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD------------------------NRALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 V D TT +YL+ + +P ++ SDE A F D +++ P V SP+ RALA + +K+D+++IGSCT + ED AAA V ++V L + VPGSG + ++F EAG + P C CL D R+ C ST+NRNF GR G + G+ +L SP AAA+A+ G+ D R Sbjct: 233 VAVDDTTVEYLKGRPFVPTGAEWDQAVEYWKTFRSDEGAQFDRVVELDAAQIVPQVTWGTSPEMVTSIDGRVPDPEREKDPVKRDAMERALAYMALAPNTPIEAIKVDKIFIGSCTNARIEDIRAAAYVVKKLNRRVAPNVRL------------AMVVPGSGLVKAQAEREGLDKVFTEAGFEW-REPGCSMCLAMNAD---RLEPGERCASTSNRNFEGRQG-QGGRTHLVSPAMAAAAAIEGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BURP0 (3-isopropylmalate dehydratase large subunit OS=Burkholderia pseudomallei (strain 1106a) GN=leuC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 72/251 (28.69%), Postives = 104/251 (41.43%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD------------------------NRALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 V D TT +YL+ + +P ++ SDE A F D +++ P V SP+ RALA + +K+D+++IGSCT + ED AAA V ++V L + VPGSG + ++F EAG + P C CL D R+ C ST+NRNF GR G + G+ +L SP AAA+A+ G+ D R Sbjct: 233 VAVDDTTVEYLKGRPFVPTGAEWDQAVEYWKTFRSDEGAQFDRVVELDAAQIVPQVTWGTSPEMVTSIDGRVPDPEREKDPVKRDAMERALAYMALAPNTPIEAIKVDKIFIGSCTNARIEDIRAAAYVVKKLNRRVAPNVRL------------AMVVPGSGLVKAQAEREGLDKVFTEAGFEW-REPGCSMCLAMNAD---RLEPGERCASTSNRNFEGRQG-QGGRTHLVSPAMAAAAAIEGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BURMS (3-isopropylmalate dehydratase large subunit OS=Burkholderia mallei (strain SAVP1) GN=leuC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 72/251 (28.69%), Postives = 104/251 (41.43%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD------------------------NRALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 V D TT +YL+ + +P ++ SDE A F D +++ P V SP+ RALA + +K+D+++IGSCT + ED AAA V ++V L + VPGSG + ++F EAG + P C CL D R+ C ST+NRNF GR G + G+ +L SP AAA+A+ G+ D R Sbjct: 233 VAVDDTTVEYLKGRPFVPTGAEWDQAVEYWKTFRSDEGAQFDRVVELDAAQIVPQVTWGTSPEMVTSIDGRVPDPEREKDPVKRDAMERALAYMALAPNTPIEAIKVDKIFIGSCTNARIEDIRAAAYVVKKLNRRVAPNVRL------------AMVVPGSGLVKAQAEREGLDKVFTEAGFEW-REPGCSMCLAMNAD---RLEPGERCASTSNRNFEGRQG-QGGRTHLVSPAMAAAAAIEGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BURMA (3-isopropylmalate dehydratase large subunit OS=Burkholderia mallei GN=leuC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 72/251 (28.69%), Postives = 104/251 (41.43%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD------------------------NRALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 V D TT +YL+ + +P ++ SDE A F D +++ P V SP+ RALA + +K+D+++IGSCT + ED AAA V ++V L + VPGSG + ++F EAG + P C CL D R+ C ST+NRNF GR G + G+ +L SP AAA+A+ G+ D R Sbjct: 233 VAVDDTTVEYLKGRPFVPTGAEWDQAVEYWKTFRSDEGAQFDRVVELDAAQIVPQVTWGTSPEMVTSIDGRVPDPEREKDPVKRDAMERALAYMALAPNTPIEAIKVDKIFIGSCTNARIEDIRAAAYVVKKLNRRVAPNVRL------------AMVVPGSGLVKAQAEREGLDKVFTEAGFEW-REPGCSMCLAMNAD---RLEPGERCASTSNRNFEGRQG-QGGRTHLVSPAMAAAAAIEGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BURM9 (3-isopropylmalate dehydratase large subunit OS=Burkholderia mallei (strain NCTC 10229) GN=leuC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 72/251 (28.69%), Postives = 104/251 (41.43%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD------------------------NRALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 V D TT +YL+ + +P ++ SDE A F D +++ P V SP+ RALA + +K+D+++IGSCT + ED AAA V ++V L + VPGSG + ++F EAG + P C CL D R+ C ST+NRNF GR G + G+ +L SP AAA+A+ G+ D R Sbjct: 233 VAVDDTTVEYLKGRPFVPTGAEWDQAVEYWKTFRSDEGAQFDRVVELDAAQIVPQVTWGTSPEMVTSIDGRVPDPEREKDPVKRDAMERALAYMALAPNTPIEAIKVDKIFIGSCTNARIEDIRAAAYVVKKLNRRVAPNVRL------------AMVVPGSGLVKAQAEREGLDKVFTEAGFEW-REPGCSMCLAMNAD---RLEPGERCASTSNRNFEGRQG-QGGRTHLVSPAMAAAAAIEGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BURM7 (3-isopropylmalate dehydratase large subunit OS=Burkholderia mallei (strain NCTC 10247) GN=leuC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 72/251 (28.69%), Postives = 104/251 (41.43%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD------------------------NRALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 V D TT +YL+ + +P ++ SDE A F D +++ P V SP+ RALA + +K+D+++IGSCT + ED AAA V ++V L + VPGSG + ++F EAG + P C CL D R+ C ST+NRNF GR G + G+ +L SP AAA+A+ G+ D R Sbjct: 233 VAVDDTTVEYLKGRPFVPTGAEWDQAVEYWKTFRSDEGAQFDRVVELDAAQIVPQVTWGTSPEMVTSIDGRVPDPEREKDPVKRDAMERALAYMALAPNTPIEAIKVDKIFIGSCTNARIEDIRAAAYVVKKLNRRVAPNVRL------------AMVVPGSGLVKAQAEREGLDKVFTEAGFEW-REPGCSMCLAMNAD---RLEPGERCASTSNRNFEGRQG-QGGRTHLVSPAMAAAAAIEGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BACC1 (3-isopropylmalate dehydratase large subunit OS=Bacillus cereus (strain ATCC 10987) GN=leuC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 66/211 (31.28%), Postives = 94/211 (44.55%), Query Frame = -2 Query: 273 YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP-----------------DNRALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 827 + +Y+D A + D++ L P V +P D RA + + D+ + V+IGSCT + D AA V G+KVK V +VP +++V + K IFEEAG + P C CLG D ++ E C ST+NRNF GR G K + +L SP AAA+AL G+ D R+ Sbjct: 259 WSELYTDADAMYDLHISIDVTDLAPYVTWGTNPSMGVRIDEKLPEKHDVNDERAFSYMGLSPGQSTYDIPVQHVFIGSCTNSRLSDLEIAASV--VKGRKVKEGVRALVVPGSKRV--------RDAAMQKGLHHIFEEAGFEW-REPGCSMCLGMNPD---QVPEGEHCASTSNRNFEGRQG-KGARTHLVSPAMAAAAALYGHFVDIRK 454
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_ASHGO (3-isopropylmalate dehydratase OS=Ashbya gossypii GN=LEU1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 57/157 (36.31%), Postives = 77/157 (49.04%), Query Frame = -2 Query: 270 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLG------GPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 701 KD+KID+V+IGSCT + ED AAA V G ++ P ++ + VPGSG + +IFE AG + C CLG GPK+ C ST+NRNF GR G + + +L SP AAA+ + G+ D REF Sbjct: 345 KDIKIDKVFIGSCTNARIEDLRAAAAV--VDGHRI------APTVKR------AMVVPGSGLVKKQAEAEGLDKIFEAAGFEW-REAGCSMCLGMNPDILGPKER---------CASTSNRNFEGRQG-RLSRTHLMSPAMAAAAGIMGHFVDIREF 476
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_ALHEH (3-isopropylmalate dehydratase large subunit OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=leuC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 56/153 (36.60%), Postives = 78/153 (50.98%), Query Frame = -2 Query: 264 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFLE 701 K++++DRV+IGSCT + ED AAA+V + KV L A L VPGSG + ++F EAG + P C CL D R+ C ST+NRNF GR G + G+ +L +P AAA+A+ G+ D R + E Sbjct: 336 KEIRLDRVFIGSCTNSRIEDLRAAAEVV----RGHKVADSLTQA----------LVVPGSGVVKEQAEKEGLDRVFIEAGFEW-REPGCSMCLAMNAD---RLQSGERCASTSNRNFEGRQG-QGGRTHLVNPAMAAAAAIAGHFVDVRHWPE 469 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |