CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_XYLFA (3-isopropylmalate dehydratase large subunit OS=Xylella fastidiosa GN=leuC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 57/150 (38.00%), Postives = 77/150 (51.33%), Query Frame = -2 Query: 267 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 695 +K+DRV+IGSCT + ED AAA+V G+K V +T K + VPGSG + +IF EAG + P C CL D ++ C ST+NRNF GR G G+ +L SP AAA+A+ G+ D RE + Sbjct: 343 IKLDRVFIGSCTNSRIEDLRAAAEV--VKGRK-------VASTVK-----QAMVVPGSGLVKAQAEVEGLDKIFIEAGFEW-REPGCSMCLAMNPD---KLGSGEHCASTSNRNFEGRQG-IGGRTHLVSPAMAAAAAVAGHFVDVREMM 473
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_XYLF2 (3-isopropylmalate dehydratase large subunit OS=Xylella fastidiosa (strain M23) GN=leuC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 57/150 (38.00%), Postives = 77/150 (51.33%), Query Frame = -2 Query: 267 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 695 +K+DRV+IGSCT + ED AAA+V G+K V +T K + VPGSG + +IF EAG + P C CL D ++ C ST+NRNF GR G G+ +L SP AAA+A+ G+ D RE + Sbjct: 343 IKLDRVFIGSCTNSRIEDLRAAAEV--VKGRK-------VASTVK-----QAMVVPGSGLVKAQAEVEGLDKIFIEAGFEW-REPGCSMCLAMNPD---KLGSGEHCASTSNRNFEGRQG-IGGRTHLVSPAMAAAAAVAGHFVDVREMM 473
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_XANCP (3-isopropylmalate dehydratase large subunit OS=Xanthomonas campestris pv. campestris GN=leuC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 57/149 (38.26%), Postives = 77/149 (51.68%), Query Frame = -2 Query: 273 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 698 ++ +DRV+IGSCT + ED AAA V A G+K V +T K L VPGSG + +IF +AG + P C CL D ++ C ST+NRNF GR G G+ +L SP AAA+A++G+ D RE Sbjct: 342 EIHLDRVFIGSCTNSRIEDLRAAAAV--AKGRK-------VASTIK-----QALVVPGSGLVKAQAEAEGLDKIFLDAGFEW-REPGCSMCLAMNPD---KLGSGEHCASTSNRNFEGRQG-AGGRTHLVSPAMAAAAAVSGHFVDVRE 471
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_XANC8 (3-isopropylmalate dehydratase large subunit OS=Xanthomonas campestris pv. campestris (strain 8004) GN=leuC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 57/149 (38.26%), Postives = 77/149 (51.68%), Query Frame = -2 Query: 273 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 698 ++ +DRV+IGSCT + ED AAA V A G+K V +T K L VPGSG + +IF +AG + P C CL D ++ C ST+NRNF GR G G+ +L SP AAA+A++G+ D RE Sbjct: 342 EIHLDRVFIGSCTNSRIEDLRAAAAV--AKGRK-------VASTIK-----QALVVPGSGLVKAQAEAEGLDKIFLDAGFEW-REPGCSMCLAMNPD---KLGSGEHCASTSNRNFEGRQG-AGGRTHLVSPAMAAAAAVSGHFVDVRE 471
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_XANC5 (3-isopropylmalate dehydratase large subunit OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=leuC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 56/148 (37.84%), Postives = 77/148 (52.03%), Query Frame = -2 Query: 273 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 695 +++DRV+IGSCT + ED AAA V A G+K V +T K L VPGSG + ++F +AG + P C CL D ++ C ST+NRNF GR G G+ +L SP AAA+A++G+ D RE Sbjct: 343 IRLDRVFIGSCTNSRIEDLRAAAAV--AKGRK-------VASTIK-----QALVVPGSGLVKAQAEAEGLDKVFLDAGFEW-REPGCSMCLAMNPD---KLGSGEHCASTSNRNFEGRQG-AGGRTHLVSPAMAAAAAVSGHFVDVRE 471
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_XANAC (3-isopropylmalate dehydratase large subunit OS=Xanthomonas axonopodis pv. citri GN=leuC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 56/148 (37.84%), Postives = 77/148 (52.03%), Query Frame = -2 Query: 273 VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 695 +++DRV+IGSCT + ED AAA V A G+K V +T K L VPGSG + ++F +AG + P C CL D ++ C ST+NRNF GR G G+ +L SP AAA+A++G+ D RE Sbjct: 343 IRLDRVFIGSCTNSRIEDLRAAAAV--AKGRK-------VASTIK-----QALVVPGSGLVKAQAEAEGLDKVFLDAGFEW-REPGCSMCLAMNPD---KLGSGEHCASTSNRNFEGRQG-AGGRTHLVSPAMAAAAAVSGHFVDVRE 471
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_ROSS1 (3-isopropylmalate dehydratase large subunit OS=Roseiflexus sp. (strain RS-1) GN=leuC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 73/249 (29.32%), Postives = 107/249 (42.97%), Query Frame = -2 Query: 267 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP------DNRA---------LARECKDV----------------KIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 881 + D TTF+Y+ + P + + +DE A + D S+L P++ +P D R AR+ D KID V++GSCT + D AA+ L G+K+ V +VP +Q+V + + +IF AG + + C ACLG D ++ VST+NRNF GR G + +LASP TA ASA+ G V DPR +L Sbjct: 239 IAPDDTTFEYIAGRPFAPKGKAWDEAVAYWRTLPTDEGAVYDRIITLDASQLTPMITYGTNPGMGMPIDGRIPTPEELPDPAARQALDKALRYMDLRPGQPLLGHKIDVVFLGSCTNSRISDLRMAAR--LLKGRKIADGVRMMVVPGSQQVKKQ--------AEAEGLHEIFRAAGAEWREA-GCSACLGMNDD---KVPPGRYAVSTSNRNFEGRQG-PGARTFLASPLTAVASAIEGAVADPRRYL 472
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_RHOBA (3-isopropylmalate dehydratase large subunit OS=Rhodopirellula baltica GN=leuC PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 51/143 (35.66%), Postives = 73/143 (51.05%), Query Frame = -2 Query: 270 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 698 +++I+RV+IGSCT + ED AAA V KV +VP + KV + + + ++F +AG D C CL D A C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R++ Sbjct: 353 EIEINRVFIGSCTNARIEDLRAAAAVIKGHHCSDKVNAMIVPGSGKVKLQ--------AEEEGLHKVFTDAGFDW-REAGCSMCLAMNPDKLAPGER---CASTSNRNFEGRQG-KGGRTHLVSPAMAAAAAIKGHFVDIRDW 482
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_PSYWF (3-isopropylmalate dehydratase large subunit OS=Psychrobacter sp. (strain PRwf-1) GN=leuC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 72/253 (28.46%), Postives = 104/253 (41.11%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD------------------------NRAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 V D TT +Y++ + P + ++SDE A F + D S + P V+ SP+ RA + D+K+DR++IGSCT + ED +AA V G+KV + V GSG + ++F EAG + P C CL D ++ C ST+NRNF GR G+ G+ +L SP AAA+AL G+ D R F Sbjct: 245 VGVDETTIEYVKGRPFAPTGEQWDQAVEYWNTLHSDEGAHFDAIVELDASDIAPQVSWGTSPEMVVDVTQYVPTLAQAKDEVQAEAWERAYQYMGLEQGQPITDIKLDRIFIGSCTNSRIEDLRSAASVI--KGRKVAANV------------KEAIVVAGSGQVKQQAEQEGLDKLFIEAGFEW-REPGCSMCLAMNAD---KLEPQEHCASTSNRNFEGRQGN-GGRTHLVSPAMAAAAALAGHFVDVRSF 478
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_PELUB (3-isopropylmalate dehydratase large subunit OS=Pelagibacter ubique GN=leuC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 50/143 (34.97%), Postives = 74/143 (51.75%), Query Frame = -2 Query: 270 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 698 D+KID+V+IGSCT G+ ED AAK+ K V +VP + L + + +IF +G + P C CL D ++ C ST+NRNF GR G + G+ +L SP AAA+A++G + D R++ Sbjct: 336 DIKIDKVFIGSCTNGRIEDLREAAKILKDKKKASHVQAMVVPGS--------GLVKEQAEQEGLDKIFIASGFEW-REPGCSMCLAMNAD---KLKPGERCASTSNRNFEGRQG-RGGRTHLVSPGMAAAAAISGNLDDVRKY 465 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |