CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BACSU (3-isopropylmalate dehydratase large subunit OS=Bacillus subtilis GN=leuC PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12 Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = -2 Query: 264 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFLE 710 ++ +D+K++ V+IGSCT + D AA + GKKV V +VP +Q V + + + QIF EAG + S C CL D + E C ST+NRNF GR G K + +L SP AA +A+ G+ D R+F + Sbjct: 332 QKIEDIKVEHVFIGSCTNSRMTDLRQAAD--MIKGKKVADSVRAIVVPGSQSVKLQ--------AEKEGLDQIFLEAGFEWRES-GCSMCLSMNNDV---VPEGERCASTSNRNFEGRQG-KGARTHLVSPAMAAMAAIHGHFVDVRKFYQ 467
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_RALEJ (3-isopropylmalate dehydratase large subunit OS=Ralstonia eutropha (strain JMP134) GN=leuC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 52/150 (34.67%), Postives = 73/150 (48.67%), Query Frame = -2 Query: 273 KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 701 + + +D+V+IGSCT + ED AAA V G+KV L + VPGSG + ++F+ AG + P C CL D R+ C ST+NRNF GR G G+ +L SP AAA+A+ G+ D R+ Sbjct: 335 ESINVDKVFIGSCTNSRIEDMRAAAWVVQKLGRKVASNVKL------------AMVVPGSGLVKEQAEREGLDKVFKAAGFEW-REPGCSMCLAMNAD---RLEPGERCASTSNRNFEGRQG-AGGRTHLVSPAMAAAAAIEGHFVDIRK 467
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_POLSJ (3-isopropylmalate dehydratase large subunit OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=leuC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 53/151 (35.10%), Postives = 73/151 (48.34%), Query Frame = -2 Query: 267 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREFL 698 D+ +D+V+IGSCT + ED AA + G+KV L + VPGSG + +IF AG + P C CL D R+ C ST+NRNF GR G G+ +L SP AAA+A+ G+ D R+F+ Sbjct: 340 DLYVDKVFIGSCTNSRIEDMREAAAIVKKLGQKVAKNVKL------------AMVVPGSGLVKEQAEREGLDKIFVAAGFEW-REPGCSMCLAMNAD---RLEPGERCASTSNRNFEGRQG-AGGRTHLVSPAMAAAAAVHGHFVDVRKFV 473
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_LEPIN (3-isopropylmalate dehydratase large subunit OS=Leptospira interrogans GN=leuC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = -2 Query: 270 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 710 ++ +D+ I++V+IGSCT + ED AAA GKKV KV +VP + +V + + +IF AG + +P C CL D + C ST+NRNF GR G K G+ +L P AAA+A+ G+ D R + Sbjct: 331 QKIEDISINKVFIGSCTNSRIEDLRAAAAT--VKGKKVSSKVQAIVVPGSGRVKRQ--------AEQEGLDKIFTAAGFEW-RNPGCSMCLAMNDDVLEPGDR---CASTSNRNFEGRQG-KGGRTHLVGPEMAAAAAIEGHFVDIRNW 464
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_LEPIC (3-isopropylmalate dehydratase large subunit OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=leuC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = -2 Query: 270 RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 710 ++ +D+ I++V+IGSCT + ED AAA GKKV KV +VP + +V + + +IF AG + +P C CL D + C ST+NRNF GR G K G+ +L P AAA+A+ G+ D R + Sbjct: 331 QKIEDISINKVFIGSCTNSRIEDLRAAAAT--VKGKKVSSKVQAIVVPGSGRVKRQ--------AEQEGLDKIFTAAGFEW-RNPGCSMCLAMNDDVLEPGDR---CASTSNRNFEGRQG-KGGRTHLVGPEMAAAAAIEGHFVDIRNW 464
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_FRASN (3-isopropylmalate dehydratase large subunit OS=Frankia sp. (strain EAN1pec) GN=leuC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 73/245 (29.80%), Postives = 100/245 (40.82%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLV--------AKPHS---PD-------------NRALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + D TTF+YL + + P + + +D A+F E D L P V A P S PD RALA DV +D V+IGSCT G+ D AA V + +VP + V + + + ++F AG D S C CLG DT + ST+NRNF GR G G+ +L SP AAA+A+TG +T P + Sbjct: 233 IAPDETTFEYLRGRPNAPTGADWDAAVEYWRTLATDPDATFDHEVVIDGPSLSPYVTWGTNPGQAAPLSSPVPDPAAYADPAARGSVERALAYMDLVPGTPLSDVAVDTVFIGSCTNGRISDLRDAADVLRGRQVADGLRVLVVPGSMAVKAE--------AEAEGLDEVFRAAGADW-RSAGCSMCLGMNPDT---LRPGERSASTSNRNFEGRQG-PGGRTHLVSPAVAAATAVTGRLTAPAD 464
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_CORDI (3-isopropylmalate dehydratase large subunit OS=Corynebacterium diphtheriae GN=leuC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 64/245 (26.12%), Postives = 101/245 (41.22%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSP------------------DNRALARE-------------CKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 + D TTF Y++ + P ++ + +DE A F +E D S + P + +P DN +A E +D+ ID V++GSCT + +D AA + V +VP++ T+ + + +IF EAG + C CLG D ++ C ST+NRNF GR G G+ +L SP AAA+A+ G + P + Sbjct: 247 IAPDETTFDYIKGREMAPTGQDWDDAVAYWKTLPTDEGAEFDTEITIDGSAITPFITWGTNPGQGLPLSSVVPSPEDFPGDNEKVAAEKALAYMGLTPGTPLRDIAIDTVFLGSCTNARMDDLRIAADILRGRSIADSVRMMVVPSS--------TMIKEQAEAEGLDKIFIEAGAQW-RTAGCSMCLGMNPD---QLTPGERCASTSNRNFEGRQG-PGGRTHLVSPAVAAATAIKGTLASPAD 478
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BURS3 (3-isopropylmalate dehydratase large subunit OS=Burkholderia sp. (strain 383) GN=leuC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 69/252 (27.38%), Postives = 103/252 (40.87%), Query Frame = -2 Query: 273 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPD------------------------NRALA-------RECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 881 V D TT YL+ + +P + SD+ A F + +++ P V SP+ RALA + +K+D+++IGSCT + ED AAA V ++V L + VPGSG + ++F +AG + P C CL D R++ C ST+NRNF GR G G+ +L SP AAA+A+ G+ D R+ Sbjct: 233 VAVDDTTIDYLKGRPFVPTGAEWNQAVEYWRQFKSDDGAQFDRVVELNAAEIVPQVTWGTSPEMVTSIDGRVPDPEREKDPVKRDAMERALAYMALEPNTPIESIKVDKIFIGSCTNARIEDIRAAAYVVKKLNRRVASNVRL------------AMVVPGSGLVKAQAEREGLDKVFTDAGFEW-REPGCSMCLAMNAD---RLDPGERCASTSNRNFEGRQG-AGGRTHLVSPAMAAAAAIEGHFVDIRQ 467
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_SHESR (3-isopropylmalate dehydratase large subunit OS=Shewanella sp. (strain MR-7) GN=leuC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = -2 Query: 273 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 698 DV I++V+IGSCT + ED +AAK A G+KV V + VPGSG + +IF EAG + P C CL D R+ C ST+NRNF GR G + + +L SP AAA+A+ G+ D R+ Sbjct: 344 DVAINKVFIGSCTNSRIEDLRSAAK--QAKGRKVA-------------SGVTAIVVPGSGQVKAQAEAEGLDKIFIEAGFEW-RLPGCSMCLAMNDD---RLEAGDRCASTSNRNFEGRQG-RGSRTHLVSPAMAAAAAIAGHFVDIRK 472
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_SHESM (3-isopropylmalate dehydratase large subunit OS=Shewanella sp. (strain MR-4) GN=leuC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = -2 Query: 273 DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPRE 698 DV I++V+IGSCT + ED +AAK A G+KV V + VPGSG + +IF EAG + P C CL D R+ C ST+NRNF GR G + + +L SP AAA+A+ G+ D R+ Sbjct: 344 DVAINKVFIGSCTNSRIEDLRSAAK--QAKGRKVA-------------SGVTAIVVPGSGQVKAQAEAEGLDKIFIEAGFEW-RLPGCSMCLAMNDD---RLEAGDRCASTSNRNFEGRQG-RGSRTHLVSPAMAAAAAIAGHFVDIRK 472 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |