CB290757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_MESSB (3-isopropylmalate dehydratase large subunit OS=Mesorhizobium sp. (strain BNC1) GN=leuC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-19 Identity = 78/248 (31.45%), Postives = 114/248 (45.97%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D TT+ Y++D+ P +E +++DE A F + D + L P+V SP++ RAL + D+ +DRV+IGSCT G+ ED AAAK+ A G+KV ++ +VP + V + + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 236 IAPDETTYAYIKDRPRAPKGAAWEMARAYWETLHTDEGAHFDRVVKLDAANLPPIVTWGSSPEDVVSVTGYVPNADEIQDETKRLSKKRALEYMGLTAGTKITDIALDRVFIGSCTNGRIEDLRAAAKI--AEGRKVHPRINAMIVPGSGLVKAQ--------AEAEGLDKIFIEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIREW 468
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_PARL1 (3-isopropylmalate dehydratase large subunit OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=leuC PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.894e-19 Identity = 84/253 (33.20%), Postives = 111/253 (43.87%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D T+ YLE + P ++ + SD A F E DI+ L PL+ SP+N RAL +VKIDRV+IGSCT G+ ED AAA + + K +K A +KV V + VPGSG + +IF EAG + P C CL D A C ST+NRNF GR G + G+ +L SP A A+A+ G+ TD REF Sbjct: 234 IAPDDKTYAYLEGRPRAPKGKAWEMAVEYWKTLPSDPDAKFDKEITIDIANLPPLITWGTSPENVIKITDRIPDPKDVADPSHAKSMQRALDYMGLTPGTPINEVKIDRVFIGSCTNGRIEDLRAAAVI---AEKAIK-------AGRKVASTVNAMVVPGSGLVKEQAEKEGLDKIFLEAGFEW-REPGCSMCLAMNADKLAPGER---CASTSNRNFEGRQG-RGGRTHLVSPAMAVAAAIEGHFTDVREF 471
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_RHIME (3-isopropylmalate dehydratase large subunit OS=Rhizobium meliloti GN=leuC PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19 Identity = 82/253 (32.41%), Postives = 115/253 (45.45%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D TTF+Y++DK P ++ +++DE A + D + L P+V+ SP++ RAL + D+ IDRV+IGSCT G+ ED A A+V G+KV PT V + VPGSG + +IF+EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 236 IAPDETTFEYIKDKPRAPKGEAWDRAVEYWKTLHTDEGAHYDRVVVLDAANLPPIVSWGSSPEDVVSVQGVVPNPDDIQDETKRTSKWRALDYMGLKPGTKITDIAIDRVFIGSCTNGRIEDLRAVAEV--VEGRKV-APT------------VSAMIVPGSGLVKEQAEAEGLDKIFKEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLLSPAMAAAAAVAGHFVDIREW 468
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_SINMW (3-isopropylmalate dehydratase large subunit OS=Sinorhizobium medicae (strain WSM419) GN=leuC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.218e-19 Identity = 83/253 (32.81%), Postives = 112/253 (44.27%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + D TTF Y+ED+ P ++ +++DE A + D + L P+V+ SP++ RAL D+ IDRV+IGSCT G+ ED A AKV G+KV PT V + VPGSG + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D RE+ Sbjct: 236 IAPDETTFAYIEDRPRAPKGEAWDMAVEYWKTLHTDEGAHYDRVVVLDAANLPPIVSWGSSPEDVVSVQGVVPNPDEIPDETKRTSKWRALDYMGLKPGTRITDIAIDRVFIGSCTNGRIEDLRAVAKV--VEGRKV-APT------------VSAMIVPGSGLVKEQAEVEGLDKIFREAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLLSPAMAAAAAIAGHFVDIREW 468
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_RHILO (3-isopropylmalate dehydratase large subunit OS=Rhizobium loti GN=leuC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.218e-19 Identity = 78/246 (31.71%), Postives = 109/246 (44.31%), Query Frame = -2 Query: 270 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPREF 881 + AD TTF Y++DK P ++ + SDE A F D +KL P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED AAAKV +V +VP + L + + +IF AG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R++ Sbjct: 236 IAADETTFAYVKDKPRAPKGAAWDAALAYWKTLQSDEGAHFDKVIVLDAAKLPPIVSWGSSPEDVVSVQGVVPNPEEITDENKRTSKIRALDYMGLTPGTKITDIALDRVFIGSCTNGRIEDLRAAAKVIEGKTVNPRVNAMIVPGS--------GLVKEQAEAEGLDKIFLAAGFDW-REPGCSMCLAMNDD---RLKPHERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIRDW 468
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BRUSU (3-isopropylmalate dehydratase large subunit OS=Brucella suis GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 83/251 (33.07%), Postives = 111/251 (44.22%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 + D TTF+Y++ + P ++ ++SDE A F D L P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED AAAKV GKKV PT V + VPGSG + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R Sbjct: 236 IAPDETTFEYIKGRPRAPQGETLEQAINYWKTLHSDEGAHFDKIVTLDAGSLPPIVSWGSSPEDVVSVTGVVPNPDDIADETKRASKWRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAAAKV--VEGKKV-APT------------VNAMIVPGSGLVKEQAEAEGLHKIFIEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BRUSI (3-isopropylmalate dehydratase large subunit OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 83/251 (33.07%), Postives = 111/251 (44.22%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 + D TTF+Y++ + P ++ ++SDE A F D L P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED AAAKV GKKV PT V + VPGSG + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R Sbjct: 236 IAPDETTFEYIKGRPRAPQGETLEQAINYWKTLHSDEGAHFDKIVTLDAGSLPPIVSWGSSPEDVVSVTGVVPNPDDIADETKRASKWRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAAAKV--VEGKKV-APT------------VNAMIVPGSGLVKEQAEAEGLHKIFIEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BRUO2 (3-isopropylmalate dehydratase large subunit OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 83/251 (33.07%), Postives = 111/251 (44.22%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 + D TTF+Y++ + P ++ ++SDE A F D L P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED AAAKV GKKV PT V + VPGSG + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R Sbjct: 236 IAPDETTFEYIKGRPRAPQGETLEQAINYWKTLHSDEGAHFDKIVTLDAGSLPPIVSWGSSPEDVVSVTGVVPNPDDIADETKRASKWRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAAAKV--VEGKKV-APT------------VNAMIVPGSGLVKEQAEAEGLHKIFIEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BRUME (3-isopropylmalate dehydratase large subunit OS=Brucella melitensis GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 83/251 (33.07%), Postives = 111/251 (44.22%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 + D TTF+Y++ + P ++ ++SDE A F D L P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED AAAKV GKKV PT V + VPGSG + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R Sbjct: 236 IAPDETTFEYIKGRPRAPQGETLEQAINYWKTLHSDEGAHFDKIVTLDAGSLPPIVSWGSSPEDVVSVTGVVPNPDDIADETKRASKWRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAAAKV--VEGKKV-APT------------VNAMIVPGSGLVKEQAEAEGLHKIFIEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIR 466
BLAST of CB290757 vs. ExPASy Swiss-Prot
Match: LEUC_BRUMB (3-isopropylmalate dehydratase large subunit OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.509e-19 Identity = 83/251 (33.07%), Postives = 111/251 (44.22%), Query Frame = -2 Query: 276 VPADGTTFKYLEDKTSLP-----------YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN------------------------RAL-------ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSG-------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVTDPR 881 + D TTF+Y++ + P ++ ++SDE A F D L P+V+ SP++ RAL + D+ +DRV+IGSCT G+ ED AAAKV GKKV PT V + VPGSG + +IF EAG D P C CL D R+ C ST+NRNF GR G K G+ +L SP AAA+A+ G+ D R Sbjct: 236 IAPDETTFEYIKGRPRAPQGETLEQAINYWKTLHSDEGAHFDKIVTLDAGSLPPIVSWGSSPEDVVSVTGVVPNPDDIADETKRASKWRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAAAKV--VEGKKV-APT------------VNAMIVPGSGLVKEQAEAEGLHKIFIEAGFDW-REPGCSMCLAMNDD---RLKPGERCASTSNRNFEGRQGFK-GRTHLVSPAMAAAAAIAGHFVDIR 466 The following BLAST results are available for this feature:
BLAST of CB290757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290757 ID=CB290757; Name=CB290757; organism=Citrus sinensis; type=EST; length=882bpback to top |