CB290758
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_HYDS0 (3-isopropylmalate dehydratase large subunit OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=leuC PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.138e-21 Identity = 54/152 (35.53%), Postives = 87/152 (57.24%), Query Frame = 1 Query: 313 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 T+TEKI A + K ++ PG+ V +D+ M +DV P S +K E KV+D++KI ++ H++ D ++ I+RDF + NIK+F+ + +G+ H L + G PG++++G DSHTCT G G F+TG+G+TD Sbjct: 4 TITEKIIADHAGKKEVFPGELVTAKIDLAMANDVTAPLSIKTLEKYGIE--KVFDKDKIALVLSHFVPAKDIKSAEQAKIVRDFAKKHNIKWFFG-----------EGEGIEHTLLPENGIVVPGDLVVGADSHTCTYGGIGAFSTGVGSTD 142
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC2_THEMA (3-isopropylmalate dehydratase large subunit 2 OS=Thermotoga maritima GN=leuC2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.138e-21 Identity = 54/153 (35.29%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MTL EKI ++ + + ++ PG+ + + DI + +D+ P + FK+ G+ K DR +V++PDH+ D ++ V ++R+F EQ I+ F++I +G + H+ L +EG + G++++G DSHTCT GA G FATG+G+TD Sbjct: 1 MTLAEKILSQKAGR-KVEPGEFLLLEPDIALANDITAPLAIKKFKEYGGKKVKYPDR--VVLVPDHFTPNKDIKSAMQVKMMREFAREQGIEKFFEIGRMG----------IEHVLLPEEGIVKSGDLVVGADSHTCTYGALGAFATGVGSTD 140
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_CLOAB (3-isopropylmalate dehydratase large subunit OS=Clostridium acetobutylicum GN=leuC PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.792e-21 Identity = 52/157 (33.12%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 298 VKNAMTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 +K MT+T+KI A + + G + N+D+++ +DV P + FK G N KV+D++K+ I+PDH+ D ++ + ++R F + I+ +++I ++G + H + ++G PG+V++G DSHTCT GA G F+TG+G+TD Sbjct: 1 MKKPMTMTQKILANHAGLDYVEAGQLITANLDLVLGNDVTTPVAVKAFKT-MGTN-KVFDKKKVAIVPDHFTPNKDIKSAEHCKMIRQFAKSKEIENYFEIGEMG----------IEHALIPEKGLAVPGDVIIGADSHTCTYGALGVFSTGVGSTD 145
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_THETN (3-isopropylmalate dehydratase large subunit OS=Thermoanaerobacter tengcongensis GN=leuC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.061e-20 Identity = 52/153 (33.99%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 +TLT+KI + + + ++ PG+ + ++VD+++ +D+ P + F+K G + KV+D KI ++PDH++ + D ++ V+++R F + NI F+++ +G + H L ++G PG+V++G DSHTCT GA FATG+G+TD Sbjct: 3 LTLTQKILSAKAGR-EVKPGELIEIDVDMVLGNDITAPVAIKEFEK-IGVD-KVFDNTKIALVPDHFVPSKDIKSAEQVNVMRKFAKKYNIVNFFEVGRMG----------IEHALLPEQGLVLPGDVVIGADSHTCTYGALTCFATGVGSTD 142
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_CLOBB (3-isopropylmalate dehydratase large subunit OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=leuC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.061e-20 Identity = 54/153 (35.29%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT+T+KI A + + G + VN+D+++ +D+ P + FKK FG + KV+++ +I I+PDH+ D +A V +R+F + I+ F+++ ++G + H L ++G G+V++G DSHTCT GA G F+TGIG+TD Sbjct: 3 MTMTQKILAAHAGLESVKAGQLIEVNLDLVLGNDITTPVAINEFKK-FGVD-KVFNKSQIAIVPDHFTPNKDIKAAEQVKYVREFSNKMGIENFFEVGEMG----------IEHCLLPEKGLVVAGDVVIGADSHTCTYGALGAFSTGIGSTD 143
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_CLOBA (3-isopropylmalate dehydratase large subunit OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=leuC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.061e-20 Identity = 54/153 (35.29%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT+T+KI A + + G + VN+D+++ +D+ P + FKK FG + KV+++ +I I+PDH+ D +A V +R+F + I+ F+++ ++G + H L ++G G+V++G DSHTCT GA G F+TGIG+TD Sbjct: 3 MTMTQKILASHAGLESVKAGQLIEVNLDLVLGNDITTPVAINEFKK-FGVD-KVFNKSQIAIVPDHFTPNKDIKAAEQVKYVREFSNKMGIENFFEVGEMG----------IEHCLLPEKGLVVAGDVVIGADSHTCTYGALGAFSTGIGSTD 143
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC1_PYRAB (3-isopropylmalate dehydratase large subunit 1 OS=Pyrococcus abyssi GN=leuC1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 57/153 (37.25%), Postives = 86/153 (56.21%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT+ EKI A SE+ ++ PG+ V +D + +DV P + F+ E G +V+DRE+I I+ DH+ D ++ R+F E IK+F++ +G V H L + G PG++++G DSHTCT GA G FATG+G+TD Sbjct: 3 MTIAEKILADHSEREEVKPGEIVMAKLDFVFGNDVTMPLAIKKFR-ELGVK-RVFDRERIAIVLDHFTPNKDIKSAEQCKSSREFAKEMGIKWFFEGGSVG----------VEHCLLPELGLVLPGDLIIGADSHTCTYGALGAFATGVGSTD 143
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_SULSY (3-isopropylmalate dehydratase large subunit OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=leuC PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.364e-20 Identity = 54/153 (35.29%), Postives = 87/153 (56.86%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT+TEKI A + + + PG+ V V VD+ + +D+ P + +K +G + KV D KI ++ DH+ D + + + I RDF + IK +++ +D GV H L ++G PG++++G DSHTCT G G F+TG+G+TD Sbjct: 3 MTITEKIIAAHAGRDYVEPGELVTVKVDLAIANDITAPLAIKQLEK-YGID-KVHDPNKIALVMDHFFPPKDIMSAQQIKISRDFAKKMGIKNYFEGQD----------SGVMHTLLPEKGFVVPGDLVIGADSHTCTYGGIGAFSTGVGSTD 143
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_CLOPH (3-isopropylmalate dehydratase large subunit OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=leuC PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.364e-20 Identity = 49/153 (32.03%), Postives = 88/153 (57.52%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT+T+KI A + P++ G + N+D+++ +D+ GP I + + + V+D++KI ++PDH+ D ++ + +R+F E +I +++I ++G + H L ++G GE +G DSHTCT GA G F+TG+G+TD Sbjct: 3 MTMTQKILAAHANLPEVKAGQLIEANLDLVLANDITGP--VAIHEIQRLKKKTVFDKDKIALVPDHFTPNKDIKSAEHCKCVREFAKEHDITNYFEIGEMG----------IEHALLPEKGLIVAGETCIGADSHTCTYGALGAFSTGVGSTD 143
BLAST of CB290758 vs. ExPASy Swiss-Prot
Match: LEUC_CLOB8 (3-isopropylmalate dehydratase large subunit OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=leuC PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.364e-20 Identity = 53/153 (34.64%), Postives = 88/153 (57.52%), Query Frame = 1 Query: 310 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTD 768 MT+T+KI A + + G + N+D+++ +D+ P + FKK FG + KV+ + +I I+PDH+ D +A V +R+F I+ F+++ ++G + H L ++G G+V++G DSHTCT GA G F+TGIG+TD Sbjct: 3 MTMTQKILAAHAGLEAVKAGQLIEANLDLVLGNDITTPVAVNEFKK-FGTD-KVFSKSQIAIVPDHFTPNKDIKAAEQVKYIREFAQNMEIENFFEVGEMG----------IEHCLLPEKGLVVAGDVVIGADSHTCTYGALGAFSTGIGSTD 143 The following BLAST results are available for this feature:
BLAST of CB290758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290758 ID=CB290758; Name=CB290758; organism=Citrus sinensis; type=EST; length=769bpback to top |