CB290762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.330e-30 Identity = 61/135 (45.19%), Postives = 95/135 (70.37%), Query Frame = -3 Query: 365 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 769 +G NV+ +A +D+KRG V + P A ++++++ HP IG GYAPV+ HT+ + V+ +ELV+K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FSD+PPLGRFA+RDM +T+A G I V+ Sbjct: 304 IGVNVRGIAKEDVKRGDVLGKPDNVPT-VAEEIVARIVVLWHPTAIGPGYAPVMHIHTATVPVQITELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.250e-29 Identity = 62/137 (45.26%), Postives = 88/137 (64.23%), Query Frame = -3 Query: 359 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 769 +GFNV+ +A D+KRG V + D P FT+Q++++NHP I GY PV HT+ +A K E+V ++ + G L+ +P F+K GD +VK+IP KP+V+E S+ P LGRFAVRDM QTVA G +EK+ Sbjct: 289 IGFNVRGIAKNDIKRGDVCGHL-DSPPTVVRAFTAQIVVLNHPSVIAPGYKPVFHVHTAQVACKIDEIVRTLNPKDGTTLKDKPDFIKTGDIAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.250e-29 Identity = 59/138 (42.75%), Postives = 95/138 (68.84%), Query Frame = -3 Query: 362 VGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 769 +GFNV+ V+ D+KRG VA ++ + P R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P LGRFA+RDM T+A G++ S+++ Sbjct: 291 IGFNVRGVSKNDIKRGDVAGHTTNPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 428
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.250e-29 Identity = 59/138 (42.75%), Postives = 95/138 (68.84%), Query Frame = -3 Query: 362 VGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 769 +GFNV+ V+ D+KRG VA ++ + P R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P LGRFA+RDM T+A G++ S+++ Sbjct: 289 IGFNVRGVSKNDIKRGDVAGHTTNPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 426
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.250e-29 Identity = 61/138 (44.20%), Postives = 92/138 (66.67%), Query Frame = -3 Query: 362 VGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 769 +GFNV+ V+ D+KRG VA + P R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ KID R+G E+ P+F+K GD+ +V + P KP+V+E + P LGRFA+RDM T+A G++ S++K Sbjct: 289 IGFNVRGVSKNDIKRGDVAGHPDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKIDPRTGNITEENPQFIKTGDSAIVVLRPMKPVVLEPVKELPQLGRFAIRDMGMTIAAGMVISIQK 426
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.250e-29 Identity = 62/135 (45.93%), Postives = 91/135 (67.41%), Query Frame = -3 Query: 365 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 769 +GFNV+ V+ D+KRG VA + ++ P A FT++V ++ HP I GY PV+ HT+ +A + E+ KID R+GK +E+ P FLK GDA +V P KPMV+E F ++ PLGRFA+RDM +TV +G++ V+ Sbjct: 299 IGFNVRGVSKNDIKRGDVAGHPENPPT-VADQFTARVFVIWHPSAIAVGYTPVIHAHTASVASRIIEIKQKIDPRTGKVIEENPSFLKPGDAAVVVFKPLKPMVIEKFQEFQPLGRFAMRDMGKTVGIGIVTDVK 432
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_CENSY (Elongation factor 1-alpha OS=Cenarchaeum symbiosum GN=tuf PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.638e-29 Identity = 56/137 (40.88%), Postives = 93/137 (67.88%), Query Frame = -3 Query: 359 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 769 +GFN++ + KD+KRG V + + P + A F +Q+I+++HP + GY PV+ CHT+ +A SE V+KI+ +G E+ PKFLK GD+ ++K+ P +P +ETF ++P +GRFA+RDM T+A G++K + ++ Sbjct: 298 IGFNLRGIEKKDIKRGDVLGDPANPP-KVAKEFLAQIIVIHHPTALAPGYTPVMHCHTAQVAAIMSEFVSKINPATGAVEEENPKFLKVGDSAIIKIRPVRPTPIETFKEFPEMGRFALRDMGATIAAGIVKEITEE 433
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.205e-29 Identity = 56/134 (41.79%), Postives = 87/134 (64.93%), Query Frame = -3 Query: 368 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 769 +G+NV+ + D++RG V + D+P A FT+Q++++ HP I GY PV CHT+ +A +E+ K+D R+G E+ P F+K GDA ++ + PTKPMV+E + P LGRFA+RDM T+A G+ ++V Sbjct: 289 IGWNVRGIGKNDIRRGDVCGHV-DNPPTVAKEFTAQIVVLQHPSAISAGYTPVFHCHTAQVACTITEIKAKLDPRTGSVKEQNPAFIKTGDAAIISVRPTKPMVIEKVKEIPQLGRFAIRDMGMTIAAGMCQNV 421
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_PYRCJ (Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tuf PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.104e-29 Identity = 61/135 (45.19%), Postives = 93/135 (68.89%), Query Frame = -3 Query: 365 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 769 VG NV+ + +D+KRG V + P A ++++++ HP IG GYAPV+ HT+ + V+ ELV+K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FSD+PPLGRFA+RDM +T+A G I V+ Sbjct: 304 VGVNVRGINKEDVKRGDVLGKVDNIPT-VAEEIVARIVVLWHPTAIGPGYAPVMHIHTATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.058e-28 Identity = 61/137 (44.53%), Postives = 89/137 (64.96%), Query Frame = -3 Query: 359 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 769 +G+NV+ + D++RG V ++ D+P + A F Q++++ HP I GY PV HTS IA + EL K+D +SG+ E+ P FLK GDA +V + PTKPMV+E + P LGRFA+RDM T+A G+ SV++K Sbjct: 287 IGWNVRGIGKADVRRGDVCGHT-DNPPKVADTFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDPKSGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422 The following BLAST results are available for this feature:
BLAST of CB290762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290762 ID=CB290762; Name=CB290762; organism=Citrus sinensis; type=EST; length=771bpback to top |