CB290762

Overview
NameCB290762
Unique NameCB290762
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_HELGL (Elongation factor 1-alpha (Fragment) OS=Helicoverpa gelotopoeon PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.781e-43
Identity = 76/120 (63.33%), Postives = 103/120 (85.83%), Query Frame = -3 
Query:  410 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 769
            VGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_HELDI (Elongation factor 1-alpha (Fragment) OS=Heliocheilus discalis PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.781e-43
Identity = 76/120 (63.33%), Postives = 103/120 (85.83%), Query Frame = -3 
Query:  410 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 769
            VGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_HELAM (Elongation factor 1-alpha (Fragment) OS=Helicoverpa armigera PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.781e-43
Identity = 76/120 (63.33%), Postives = 103/120 (85.83%), Query Frame = -3 
Query:  410 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 769
            VGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_HELAL (Elongation factor 1-alpha (Fragment) OS=Heliocheilus albipunctella PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.781e-43
Identity = 76/120 (63.33%), Postives = 103/120 (85.83%), Query Frame = -3 
Query:  410 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 769
            VGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_ANIIF (Elongation factor 1-alpha (Fragment) OS=Anicla infecta PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.781e-43
Identity = 76/120 (63.33%), Postives = 103/120 (85.83%), Query Frame = -3 
Query:  410 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 769
            VGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_ADIBE (Elongation factor 1-alpha (Fragment) OS=Adisura bella PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.781e-43
Identity = 76/120 (63.33%), Postives = 103/120 (85.83%), Query Frame = -3 
Query:  410 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 769
            VGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.067e-41
Identity = 78/133 (58.65%), Postives = 106/133 (79.70%), Query Frame = -3 
Query:  371 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKS 769
            VGFNV NV+V+D+ RG V  ++K+DP  +  +  +QVI+MNHP  I  GY PV+DCHT+HIA KF ++++++D+R+GK L + P  +KNG + M +++P+KPM VETFSDYPPLGRFAVRDMRQTVAVG+IKS
Sbjct:  298 VGFNVNNVSVEDIHRGNVCGDAKNDPPCKTES-DAQVIVMNHPSGIRPGYCPVVDCHTAHIACKFEKIMSEMDKRTGKVLRENPDIVKNGKSMMAQLVPSKPMCVETFSDYPPLGRFAVRDMRQTVAVGIIKS 429
[Close]
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.878e-39
Identity = 76/140 (54.29%), Postives = 106/140 (75.71%), Query Frame = -3 
Query:  350 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPT 769
            VGFNV+ +  K++K G V  ++K+DP + A +F +QVI+MNHPG I  GY PVLD HT+H+A KF  L++K + R+GK +E+ PKFLKNG++G+V+++PTKP+ VE FS Y  LGRF +RDM++TVAVGVI+ V  K  T
Sbjct:  294 VGFNVR-LEAKEIKAGHVCGDAKNDPPKNAESFIAQVIVMNHPGHIKAGYQPVLDIHTAHVATKFKTLLSKNEARTGKLIEEAPKFLKNGESGIVELVPTKPLCVEEFSKYAALGRFVIRDMKRTVAVGVIQEVIHKKET 432
[Close]
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 5.424e-33
Identity = 66/135 (48.89%), Postives = 96/135 (71.11%), Query Frame = -3 
Query:  365 VGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 769
            +GFNV+ V  KD+KRG V  +  + P   A  FT+++I++ HP  + NGY PV+  HT+ +A + SELV+K+D R+G+E EK P+FLK GD  +VK  P KP+ VE ++++PPLGRFA+RDM +TV VG+I  V+
Sbjct:  295 IGFNVRGVEKKDIKRGDVVGHPNNPPT-VADEFTARIIVVWHPTALANGYTPVIHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPPLGRFAMRDMGKTVGVGIIVDVK 428
[Close]
BLAST of CB290762 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.208e-32
Identity = 65/138 (47.10%), Postives = 96/138 (69.57%), Query Frame = -3 
Query:  362 VGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 769
            +GFNV+ V   D+KRG VA ++ + P   R    F +Q+I++NHP  I  GY PVL  HT+ +AV+F +L+ K+D R+G  +E+ P+F+K GD+ +V + PTKPMV+E   + P LGRFA+RDM QTVA G++ S++K
Sbjct:  289 IGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPRDTFKAQIIVLNHPTAITIGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKELPQLGRFAIRDMGQTVAAGMVISIQK 426
The following BLAST results are available for this feature:
BLAST of CB290762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A_HELGL5.781e-4363.33Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELDI5.781e-4363.33Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_HELAM5.781e-4363.33Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELAL5.781e-4363.33Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_ANIIF5.781e-4363.33Elongation factor 1-alpha (Fragment) OS=Anicla inf... [more]
EF1A_ADIBE5.781e-4363.33Elongation factor 1-alpha (Fragment) OS=Adisura be... [more]
EF1A_BLAHO7.067e-4158.65Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1A2_EUPCR3.878e-3954.29Elongation factor 1-alpha 2 OS=Euplotes crassus GN... [more]
EF1A_SULSO5.424e-3348.89Elongation factor 1-alpha OS=Sulfolobus solfataric... [more]
EF1A_THESM1.208e-3247.10Elongation factor 1-alpha OS=Thermococcus sibiricu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dd09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dd09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290762 ID=CB290762; Name=CB290762; organism=Citrus sinensis; type=EST; length=771bp
TTTTTTTTTTTAATAAAGAGCTTAAAATGAGCTTCCAAATCTTTTAAAAC
CACCAACTTTGACATCCAGCAGCTGGTCTACCATTTTCACAACTCAATTT
AGTGCTATTAACCAAATTCAGAATATAAAAATCCGAACACCCACCACAGC
CAGTTAAGCAGAAAGATAACATCCCAATTGCTCAACAGCAAACTGGGGGA
AGCAAATAGGGCTGTTTGCAGAAACATTGATGCAAAACAAAAACAGACAA
GAAAATAAAAAAAGACAGAAAATAAACCCTAACTATTGTAGACAGACCCA
TAAAAATTTCTCATTTCTTCTTGGCTGCGGACTTGGTGACCTTCGCACCT
GTGGGATCCTTCTTCTCAACACTCTTGATAACACCCACAGCAACAGTCTG
ACGCATGTCCCTAACAGCAAAACGACCAAGGGGTGGGTAATCGGAGAAGG
TTTCAACAACCATGGGCTTGGTGGGAATCATCTTAACCATTCCGGCGTCT
CCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTGCCTGATCGCCT
ATCAATCTTCGTCACGAGCTCAGAAAACTTGACGGCAATGTGGGAGGTGT
GGCAGTCAAGCACTGGGGCATATCCATTTCCAATCTGGCCAGGGTGGTTC
ATGATGATGACCTGTGAGGTGAAGTTGGCAGCTTCCCTGGCCGGATCATC
CTTCGAGTTGGAAGCAACAAAACCACGCTTGAGATCCTTGACAGCAACGT
TCTTCACGTTGAAACCAACAT
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