CB290807

Overview
NameCB290807
Unique NameCB290807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290807 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.383e-22
Identity = 63/152 (41.45%), Postives = 88/152 (57.89%), Query Frame = 3
Query:   87 ICVTGAGGFIASWMVKLLLEKGYNVKGTVRNPDD-PKNAHLRELEGAKERLVLCKADLLDYESLKEAINGCEGVFHTASPV---TDDPE-QMVEPAVIGTKN-XXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 524
            + VTGA GF+ SW+V  LL+ GY V+ TVR+P +  K   L EL GAKERL + KADL +  S  EAI GC GVFH A+P+   + DPE ++++P V G  +               FTSS G+V ++    P    D+  WSD+++C+  K
Sbjct:    8 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIE--ERPRPAYDQDNWSDIDYCRRVK 157          
BLAST of CB290807 vs. ExPASy Swiss-Prot
Match: DFRA_ANTMA (Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 68/168 (40.48%), Postives = 96/168 (57.14%), Query Frame = 3
Query:   48 TVIDSSSQV---SGQTICVTGAGGFIASWMVKLLLEKGYNVKGTVRNPDDPKNA-HLRELEGAKERLVLCKADLLDYESLKEAINGCEGVFHTASPV---TDDPE-QMVEPAVIGTKN-XXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 524
            T +++SS+    S  T+CVTGA GFI SW+V  LLE+GY V+ TVR+P + K   HL EL  A   L L KAD+    S  EAI GCEGVFH A+ +   + DPE ++++P + G  N               FT+S G V ++ ++ P  V DE+  SD++F  + K
Sbjct:    4 TSLNTSSETAPPSSTTVCVTGAAGFIGSWLVMRLLERGYTVRATVRDPGNMKKVKHLIELPKADTNLTLWKADMTVEGSFDEAIQGCEGVFHLATSMEFDSVDPENEVIKPTIDGMLNIIKSCVQAKTVKKFIFTTSGGTVNVEEHQKP--VYDETDSSDMDFINSKK 169          
BLAST of CB290807 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.969e-20
Identity = 58/141 (41.13%), Postives = 83/141 (58.87%), Query Frame = 3
Query:  120 SWMVKLLLEKGYNVKGTVRNPDDPKNAH-LRELEGAKERLVLCKADLLDYESLKEAINGCEGVFHTASPV---TDDPE-QMVEPAVIGTKN-XXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK 524
            SW+V  L+E GY V+ TVR+P++ K    L EL GAK +L + KADL +  S  EAI GC GVFH A+P+   + DPE +M++P + G  +               +TSS G + +  ++ P  + DESCWSD+EFC+  K
Sbjct:    2 SWLVMRLMEPGYMVRATVRDPENLKKVSPLLELPGAKSKLSIWKADLGEEGSFDEAIKGCTGVFHVATPMDFESKDPENEMIKPTIKGVLDIMKACLKAKTVRRLIYTSSAGTLNVTEDQKP--LWDESCWSDVEFCRRVK 140          
BLAST of CB290807 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 6.074e-18
Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = 3
Query:   90 CVTGAGGFIASWMVKLLLEKGYNVKGTVRNPDDPKN-AHLRELEGAKERLVLCKADLLDYESLKEAINGCEGVFHTASPV---TDDPEQ-MVEPAVIGTKN-XXXXXXXXXXXXXXFTSSIGAVYMDPNRSPDDVVDESCWSDLEFCKNTK--NW 530
            CV G  G +AS ++K LL+ GY V  TVR+P++ K  AHLR+L+   + L + KADL D +S + + +GCE +FH A+P+   ++DPE+ M++PA+ G  N               +TSS  AV ++       V++E  W+D+EF    K  NW
Sbjct:   14 CVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGD-LKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNW 167          
The following BLAST results are available for this feature:
BLAST of CB290807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
DFRA_HORVU2.383e-2241.45Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_ANTMA1.183e-2140.48Dihydroflavonol-4-reductase OS=Antirrhinum majus G... [more]
DFRA_MEDSA4.969e-2041.13Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]
BAN_ARATH6.074e-1837.42Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290807 ID=CB290807; Name=CB290807; organism=Citrus sinensis; type=EST; length=747bp
GATTTTCTTCCGTTCCAAACAAAGCATTACAATTTAACTTCACCATGACG
GTAATTGATAGCAGCTCCCAAGTTTCTGGCCAAACTATTTGTGTCACCGG
CGCCGGTGGCTTCATCGCTTCTTGGATGGTTAAACTTCTCCTTGAAAAAG
GTTACAATGTTAAAGGCACCGTCAGGAACCCAGATGATCCAAAGAATGCT
CATTTGAGGGAGCTTGAAGGAGCAAAAGAAAGATTAGTTTTATGCAAAGC
TGATCTTCTTGATTATGAGAGTCTCAAAGAGGCCATTAATGGATGTGAGG
GAGTTTTTCATACTGCTTCCCCTGTGACAGATGATCCAGAACAAATGGTG
GAGCCCGCGGTGATCGGAACCAAGAACGTGATTGTTGCGGCGGCTGAGGC
CAAGGTCCGGCGTGTTGTGTTCACGTCGTCGATCGGTGCAGTTTACATGG
ACCCCAACCGGAGCCCTGATGATGTTGTTGATGAATCTTGCTGGAGTGAT
CTTGAGTTTTGCAAAAACACCAAGAACTGGTATTGCTACGGAAAAGCCGT
GGCGGAGAAGGCGGCGTGGGAGGAGGCGGTGGCAAGAGGGGTGGACCTGG
TGGTGGTGAACCCAGTGTTGGTGCTAGGGCCATTGTTGCAATCAACTGTG
AATGCTAGCATTATTCACATTCTTAAGTACTTAAATGGCTCAGCAAAGAC
TTATGCTAATTCAGTTCAGGCATATGTGCACGTTAGGGATGTGGCAT
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