CB290809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290809 vs. ExPASy Swiss-Prot
Match: IMA8_HUMAN (Importin subunit alpha-8 OS=Homo sapiens GN=KPNA7 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.189e-45 Identity = 100/205 (48.78%), Postives = 131/205 (63.90%), Query Frame = 1 Query: 193 VEIRKNKREDNLLKKRREGXXXXXXXXXXDASQNAIEKKLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTP 807 +E+RK K+++ LK+R A A+ L I ++GV S DP L +AT RK+LS E++PP+ VI+AG++PR VEFL P LQFEAAWALTN+ASGTSE TR V+E GA+ ++LLSS + V EQAVWALGN+AGD P RD V++S A+ LLA ++ ++ LRN TWTLSN CR K P P Sbjct: 33 LELRKAKKDEQTLKRRNITSFCPDTPSEKTAKGVAVSLTLGEI---IKGVNSSDPVLCFQATQTARKMLSQEKNPPLKLVIEAGLIPRMVEFLKSSLYPCLQFEAAWALTNIASGTSEQTRAVVEGGAIQPLIELLSSSNVAVCEQAVWALGNIAGDGPEFRDNVITSNAIPHLLALISPTLPITFLRNITWTLSNLCRNKNPYP 234
BLAST of CB290809 vs. ExPASy Swiss-Prot
Match: IMA3_CAEEL (Importin subunit alpha-3 OS=Caenorhabditis elegans GN=ima-3 PE=1 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 6.014e-44 Identity = 99/227 (43.61%), Postives = 128/227 (56.39%), Query Frame = 1 Query: 127 RKKGYKTGVXXXXXXXXXXXNLVEIRKNKREDNLLKKRREGXXXXXXXXXXDASQNAIEKKLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPTP 807 R+ YK +V IRK+KRE+ + K+R + L + V S DPA QL A Q RK+LS +R+PPID++I +G++P V+ L D P LQFEAAWALTN+ASGTSE T+ V+ GAVP+F+QLLS G+ +V EQ+VWALGN+ GD P RD L G L PLL +N + LRN TW + N CR K P P Sbjct: 5 RQAYYKNNAKEQIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPGPFDANLLRLT--VAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSSTD-PNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIGDGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAP 228
BLAST of CB290809 vs. ExPASy Swiss-Prot
Match: IMA_DROME (Importin subunit alpha OS=Drosophila melanogaster GN=Pen PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.527e-42 Identity = 94/209 (44.98%), Postives = 127/209 (60.77%), Query Frame = 1 Query: 193 VEIRKNKREDNLLKKRREGXXXXXXXXXXDASQNAIEKKLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPPT-PFEQ 816 +E+RK+K+ED + K+R Q+ ++ ++ I V + SED Q RK+LS ER+PPID +I G+VP + FL + LQFEAAWALTN+ASGTS+ TR VIEH AVP FV LL S S ++ EQAVWALGN+AGD + RD+V+ + +L +N + LS LRN W +SN CR K P+ PF+Q Sbjct: 32 IELRKSKKEDQMFKRRNINDEDLTSPLKELNGQSPVQLSVDEI---VAAMNSEDQERQFLGMQSARKMLSRERNPPIDLMIGHGIVPICIRFLQNTNNSMLQFEAAWALTNIASGTSDQTRCVIEHNAVPHFVALLQSKSMNLAEQAVWALGNIAGDGAAARDIVIHHNVIDGILPLINNETPLSFLRNIVWLMSNLCRNKNPSPPFDQ 237
BLAST of CB290809 vs. ExPASy Swiss-Prot
Match: IMA1A_DICDI (Probable importin subunit alpha-A OS=Dictyostelium discoideum GN=DDB_G0273149 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.365e-40 Identity = 95/263 (36.12%), Postives = 144/263 (54.75%), Query Frame = 1 Query: 115 RAEVRKKGYKTGVXXXXXXXXXXXNLVEIRKNKREDNLLKKR-----------REGXXXXXXXXXXDASQNAIEKKLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLL-SSGSDDVREQAVWALGNVAGDSPSCRDLVLSSG---ALMPLL----------AQLNEHSKLSMLRNATWTLSNFCRGKPPTPFEQGETC 828 + + RKK +K + N + IRKN RE+ +LK+R + +E K++++P +V + S D A + QFRKLLSI PPID+VI+ G++P+ + L ++ P++QFE+AWALTN+ASG + T+ V+E G+VP+F+QLL + +D+V+EQ WALGN+AGD+ R+ +L G AL+PLL N K+ +++N WT+SN CRGKP F C Sbjct: 6 KQDSRKKEFKKSLDSETARRKREENSIGIRKNAREELMLKRRGIVQPNPSTSYQIIVPPEVQEQFQKYENETMENKIKNLPGLVTALNSNDQAYVYSSLVQFRKLLSIHAYPPIDQVIECGIIPKLNQLLQCNN-PKVQFESAWALTNIASGNNRQTQTVMESGSVPIFIQLLCAETTDEVKEQCAWALGNIAGDTVDSRNYLLKYGAMNALIPLLHYGEDNGATTTSANSERKIGLIQNVVWTISNLCRGKPQPDFSVVSQC 267 HSP 2 Score: 73.9442 bits (180), Expect = 1.223e-12 Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 421 IDEVIKAGVVPRFVEFLGRHDMPQLQFEAAW-ALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSN 780 I VI +GVVPR V+ L D + F A A+ N+ +G S T++VI++ V + +LL+ +R+++ WAL N+ PS D+V+S+ + L L HS+ + R A W LSN Sbjct: 303 IQAVIDSGVVPRLVKLLEYPD--SIVFTPALRAVGNIVTGESSQTQIVIDNNGVELITRLLAVQKKSIRKESCWALSNITAGEPSQIDVVVSNPKTVTTLISLLSHSEHDIKREACWALSN 421
BLAST of CB290809 vs. ExPASy Swiss-Prot
Match: IMA2_CAEEL (Importin subunit alpha-2 OS=Caenorhabditis elegans GN=ima-2 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.304e-22 Identity = 71/213 (33.33%), Postives = 108/213 (50.70%), Query Frame = 1 Query: 193 VEIRKNKREDNLLKKRR-----EGXXXXXXXXXXDA---SQNAIEKKLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDDVREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKL--SMLRNATWTLSNFCRGKPP 801 VEIRK K D ++K+R EG + Q++ + I +++ SED ++ RK LS ++PPIDEVI G++ V+ L + ++Q+EAAWALTN+ SG++E T +E G + L S + EQA+WA+ N+AGDS RD V+ + L+ + + +L S +R W SN CR K P Sbjct: 43 VEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKISHQQSSTRLSNDEIRAILSNNPSEDDMVR--CFESLRKSLSKTKNPPIDEVIHCGLLQALVQALSVEN-ERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAVANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCRHKNP 252
BLAST of CB290809 vs. ExPASy Swiss-Prot
Match: IMA2_ORYSJ (Importin subunit alpha-2 OS=Oryza sativa subsp. japonica GN=Os01g0158000 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.194e-21 Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = 1 Query: 292 NAIEKKLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSGSDD-VREQAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLSMLRNATWTLSNFCRGKPP 801 +A+E+ ++ +GV + ++EA R+LLS P +D IKAG VP V++L + EAAW LTN+A+G E T+ ++ A+P+ + L S V EQ WA+GNVAG+ R +L+ GAL P L +L SK S R A W +SN +G P Sbjct: 89 HAVEELKSALSIQGKGVQKK----KIEALRDLRRLLSQPEVPLVDTAIKAGAVPLLVQYLSFGSSDEQLLEAAWCLTNIAAGEPEETKSLLP--ALPLLIAHLGEKSSTLVAEQCAWAIGNVAGEGAELRSTLLAQGALRP-LTRLMFSSKGSTARTAAWAMSNLIKGPDP 252 The following BLAST results are available for this feature:
BLAST of CB290809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290809 ID=CB290809; Name=CB290809; organism=Citrus sinensis; type=EST; length=839bpback to top |