CB290810

Overview
NameCB290810
Unique NameCB290810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PPK22_SCHPO (Serine/threonine-protein kinase ppk22 OS=Schizosaccharomyces pombe GN=ppk22 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.081e-34
Identity = 69/121 (57.02%), Postives = 86/121 (71.07%), Query Frame = -3
Query:  402 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 755
            +NSFVGTEEYIAPE+I   GHT AVDWW LGI +YE+LYG TPF+GK R  TF+NIL+ D+ FP    +   S   K L+ RLL +D   R GS  GA++IK+HPFF+ + WAL+R M PP
Sbjct:  339 TNSFVGTEEYIAPEVIRSCGHTVAVDWWTLGIFIYEILYGTTPFKGKNRHATFSNILYSDVSFPEYHGAPNVSSTCKSLIRRLLVKDESKRCGSVAGASDIKQHPFFRHIQWALLRSMKPP 459          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: OXI1_ARATH (Serine/threonine-protein kinase OXI1 OS=Arabidopsis thaliana GN=OXI1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.866e-29
Identity = 64/124 (51.61%), Postives = 83/124 (66.94%), Query Frame = -3
Query:  387 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW-ALVRCMNPPELDAP 755
            SNSFVGTEEY+APE+I+G GH  AVDWW+LG++LYEMLYG TPFRG  R++TF  IL K    P+ T  +   + L+ RLL +DP  R+       EIK H FF+GV+W  ++    PP + AP
Sbjct:  233 SNSFVGTEEYVAPEVISGDGHDFAVDWWSLGVVLYEMLYGATPFRGSNRKETFYRILSKP---PNLTGETTSLRDLIRRLLEKDPSRRI----NVEEIKGHDFFRGVDWEKVILVSRPPYIPAP 349          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PKGA_DICDI (Probable serine/threonine-protein kinase pkgA OS=Dictyostelium discoideum GN=pkgA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25
Identity = 70/181 (38.67%), Postives = 101/181 (55.80%), Query Frame = -3
Query:  318 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNP---PEL----DAPLFATDTEKE-YKVVD-------PGMQDLQQN 815
            ++ + + Q  P      +    S VGT +Y+APEI+ G GH ++ DW++LG++LYE L G +PF G + Q+TF NIL +++ +P     S  A+ L+ +LL  DP+ RLG   GA EIK HPFFK +NW  +    P   P++    D   F  D  KE YKV D       P +Q+  QN
Sbjct: 1116 QQSQQQQQTTPPLPPHNIHRKLSCVGTPDYLAPEILLGIGHGASADWFSLGVILYEFLCGVSPFNGSSVQETFQNILQRNISWPED--MSPEARDLIDKLLALDPRQRLG-FNGAEEIKSHPFFKSINWKTILTQEPYFKPKIENLQDTSYF--DPRKEIYKVSDDFAESCKPFVQNQNQN 1291          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: Y0701_DICDI (Probable serine/threonine-protein kinase DDB_G0272282 OS=Dictyostelium discoideum GN=DDB_G0272282 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.122e-23
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = -3
Query:  429 VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 743
            VGT +Y++PEI+ G GH   VDWWALGI+LYE L G  PF   T +  F +ILH+D +       S  AK L+ +LL+ DP  RLG++ GA E+K HPFF  VNW
Sbjct: 1753 VGTPDYLSPEILLGTGHGQTVDWWALGIILYEFLTGSPPFNDDTPELIFQHILHRDREMEWPEEISSEAKDLILKLLNPDPYKRLGAN-GAYEVKTHPFFANVNW 1856          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: CEK1_SCHPO (Serine/threonine-protein kinase cek1 OS=Schizosaccharomyces pombe GN=cek1 PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.122e-23
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  369 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 755
            S  F+GT +YIAPE+I G     A DWW+LG +++E L+GY PF  +T  + F NIL + + +P+   T  S  A  L+ RLL  +P +RLG++ G  EIK HPFFK VNW  +   +PP +  P    DT
Sbjct:  854 SKRFIGTPDYIAPEVILGNPGIKASDWWSLGCVVFEFLFGYPPFNAETPDQVFQNILARRINWPAEVFTAESSVALDLIDRLLCMNPANRLGAN-GVEEIKAHPFFKSVNWDTILEEDPPFVPKPFSPEDT 983          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PPK18_SCHPO (Serine/threonine-protein kinase ppk18 OS=Schizosaccharomyces pombe GN=ppk18 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.465e-23
Identity = 61/151 (40.40%), Postives = 83/151 (54.97%), Query Frame = -3
Query:  369 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 815
            K  R    Q+  F  +P  A   FVGT +Y+APE + G+     VDWWALG +L+E L+GY PF  +T +K F NIL  ++ +P     P S  A  L+   L  +P+ RLG  +  NEIK+HPFF G+NW  +     P + AP    DT
Sbjct:  809 KVNRTPNLQSVPFFRQP-DAPKRFVGTPDYLAPETLRGSTQDDMVDWWALGCVLFEFLFGYPPFHAETPEKVFENILANNIAWPDLEMYPCSEEALDLINGFLQPNPERRLGFSD-INEIKEHPFFNGINWDDIFSHEAPFIPAPETPLDT 957          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: CBK1_YEAST (Serine/threonine-protein kinase CBK1 OS=Saccharomyces cerevisiae GN=CBK1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.566e-23
Identity = 58/130 (44.62%), Postives = 79/130 (60.77%), Query Frame = -3
Query:  369 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLL-HRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 749
            S VGT +YIAPEI    G+    DWW+LG ++YE L G+ PF  +T Q+T+  I++  + L+FP     S  A+ L+ RLL H D   RLG H GA+EIK HPFF+GV+W  +R +  P +      TDT
Sbjct:  570 STVGTPDYIAPEIFLYQGYGQECDWWSLGAIMYECLIGWPPFCSETPQETYRKIMNFEQTLQFPDDIHISYEAEDLIRRLLTHAD--QRLGRHGGADEIKSHPFFRGVDWNTIRQVEAPYIPKLSSITDT 697          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: YPK1_YEAST (Serine/threonine-protein kinase YPK1 OS=Saccharomyces cerevisiae GN=YPK1 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.495e-23
Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = -3
Query:  369 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW--ALVRCMNPPELDAPLFATDT 755
            +++F GT EY+APE++ G G+T AVDWW LG+LLYEML G  P+  +   K +  IL + L FP        AK L+  LL RDP  RLG + GA+EI+ HPFF  ++W   L++   PP   A   + DT
Sbjct:  502 TDTFCGTPEYLAPELLLGLGYTKAVDWWTLGVLLYEMLTGLPPYYDEDVPKMYKKILQEPLVFPDGFDRD--AKDLLIGLLSRDPTRRLG-YNGADEIRNHPFFSQLSWKRLLMKGYIPPYKPAVSNSMDT 629          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: CBK1_KLULA (Serine/threonine-protein kinase CBK1 OS=Kluyveromyces lactis GN=CBK1 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.495e-23
Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = -3
Query:  369 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 749
            S VGT +YIAPEI    G+    DWW+LG ++YE L G+ PF  +T Q+T+  I++  + L+FP     S  A+ L+ RLL    ++RLG H GA+EIK HPFF GV+W  +R +  P +      TDT
Sbjct:  529 STVGTPDYIAPEIFLYQGYGQECDWWSLGAIMYECLIGWPPFCSETPQETYRKIMNFEQTLQFPDDIHISYEAEDLIRRLLTHS-ENRLGRHGGADEIKAHPFFSGVDWNTIRQVEAPYIPKLSSVTDT 656          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6A4_MOUSE (Ribosomal protein S6 kinase alpha-4 OS=Mus musculus GN=Rps6ka4 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.240e-22
Identity = 65/159 (40.88%), Postives = 89/159 (55.97%), Query Frame = -3
Query:  342 FMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLH--AKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPP---------ELDAPLFATDTEKEYKVVDP 779
            F+ E    + SF GT EY+APEII   AGH  AVDWW+LGILL+E+L G +PF  +  + T A +  + LK     P  +   A+ L+ RLL +DPK RLG+  +GA E+K HPFF+G++W  +     P         ELD   FA +  +   V  P
Sbjct:  186 FLTEEKERTFSFCGTIEYMAPEIIRSKAGHGKAVDWWSLGILLFELLTGASPFTLEGERNTQAEVSRRILKCSPPFPLRIGPVAQDLLQRLLCKDPKKRLGAGPQGAQEVKSHPFFQGLDWWALAARKIPAPFRPQIRSELDVGNFAEEFTRLEPVYSP 344          
The following BLAST results are available for this feature:
BLAST of CB290810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
PPK22_SCHPO1.081e-3457.02Serine/threonine-protein kinase ppk22 OS=Schizosac... [more]
OXI1_ARATH8.866e-2951.61Serine/threonine-protein kinase OXI1 OS=Arabidopsi... [more]
PKGA_DICDI2.669e-2538.67Probable serine/threonine-protein kinase pkgA OS=D... [more]
Y0701_DICDI1.122e-2350.48Probable serine/threonine-protein kinase DDB_G0272... [more]
CEK1_SCHPO1.122e-2343.51Serine/threonine-protein kinase cek1 OS=Schizosacc... [more]
PPK18_SCHPO1.465e-2340.40Serine/threonine-protein kinase ppk18 OS=Schizosac... [more]
CBK1_YEAST5.566e-2344.62Serine/threonine-protein kinase CBK1 OS=Saccharomy... [more]
YPK1_YEAST9.495e-2344.27Serine/threonine-protein kinase YPK1 OS=Saccharomy... [more]
CBK1_KLULA9.495e-2343.41Serine/threonine-protein kinase CBK1 OS=Kluyveromy... [more]
KS6A4_MOUSE1.240e-2240.88Ribosomal protein S6 kinase alpha-4 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290810 ID=CB290810; Name=CB290810; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTGAAGAAAGAGATAGAAAATGGATTAATTACCTATTAA
ATTAATAAAATACAAAACTTACAAAGTACCCACCCTTACAGATACAAACG
ATGCATACAAGTAATATATTACATACACAAGGCCTCCAAGATTATCTATC
GACGACAACTGCCGAGGTGAAAGCACAAGCAGAATCAATGAAACTGTTAT
TACTCGTCAAGTTGAGCTCCCCTTCCATAGCCTCTACTAAATGGGATGCA
CGTACCAACACAAATTTGCAGCAGACACTTCAAATAAAATAACAAAGAAT
TAGACTCCTCAGAAAACGTTTTGTTGCAGATCTTGCATTCCTGGATCCAC
AACTTTATACTCCTTCTCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCT
CAGGAGGGTTCATGCAACGAACTAGTGCCCAATTGACACCTTTGAAAAAT
GGATGCTTCTTTATTTCATTTGCTCCTTCATGCGAACCTAATCTGCTCTT
TGGATCTCTATGCAACAGGCGGTACATTAGCTGCTTTGCATGAAGACTTG
TCGGTGTACTTGACGGAAATTTGAGGTCTTTGTGGAGAATATTTGCAAAT
GTTTTTTGTCTTGTCTTGCCCCTGAATGGTGTGTATCCATAAAGCATTTC
ATACAGAAGAATTCCAAGAGCCCACCAGTCCACTGCACTTGTATGGCCTG
CACCGGCTATAATTTCCGGAGCTATATATTCTTCTGTGCCAACAAAAGAA
TTTGATGCTCGCATTGGTTCAGCCATGAAGACTGGATTCTGTTGGCCTTT
GTGGCGCCTTTTCTTTT
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