CB290810

Overview
NameCB290810
Unique NameCB290810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: TRC_DROME (Serine/threonine-protein kinase tricorner OS=Drosophila melanogaster GN=trc PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18
Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = -3
Query:  417 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 749
            S VGT +YIAPE+    G+  A DWW+LG+++YEML GY PF     Q T+  +++  + L FP   P S  AK+ +      +   RLGS  G  ++K  PFF+GV+W  +R
Sbjct:  292 STVGTPDYIAPEVFLQTGYGPACDWWSLGVIMYEMLMGYPPFCSDNPQDTYRKVMNWRETLIFPPEIPISEEAKETIINFC-CEADRRLGSQRGLEDLKSVPFFRGVDWEHIR 403          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PRKX_HUMAN (Serine/threonine-protein kinase PRKX OS=Homo sapiens GN=PRKX PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18
Identity = 56/143 (39.16%), Postives = 75/143 (52.45%), Query Frame = -3
Query:  342 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALV--RCMNPP-------ELDAPLFATDTEKEYKVVDP 740
            GT EY+APE+I   GH  AVDWWALGIL++EML G+ PF        +  IL   + FP       H K L+ +LL  D   RLG+   GAN++K H +F+ V+W  V  R + PP       + D   F T  E ++    P
Sbjct:  206 GTPEYLAPEVIQSKGHGRAVDWWALGILIFEMLSGFPPFFDDNPFGIYQKILAGKIDFPRH--LDFHVKDLIKKLLVVDRTRRLGNMKNGANDVKHHRWFRSVDWEAVPQRKLKPPIVPKIAGDGDTSNFETYPENDWDTAAP 346          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: MASTL_MOUSE (Microtubule-associated serine/threonine-protein kinase-like OS=Mus musculus GN=Mastl PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18
Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = -3
Query:  369 VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 743
            +GT +Y+APE++ G  H  AVDWWALG+ L+E L G  PF  +T Q+ F NIL +D+ +P      S +A+  M  LL  D   R     G  E+K+HP F  V+W  ++    P +  P   TDT
Sbjct:  725 LGTPDYLAPELLLGTAHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILKRDIPWPEGEEKLSDNAQSAMDMLLTIDDSKR----AGMRELKQHPLFSEVDWENLQHQTMPFVPQPDDETDT 846          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KPC1_TRIRE (Protein kinase C-like OS=Trichoderma reesei GN=pkc1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18
Identity = 53/150 (35.33%), Postives = 84/150 (56.00%), Query Frame = -3
Query:  324 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALV--RCMNPPELDAPLFATDT---EKEYKVVDPGMQDLQ 755
            +++F GT E++APEI+    +  AVDWWA G+L+Y+ML   +PFRG+   + +  IL  +  +P   P    +  ++ +LL R+P  RLGS    A E+   PFF+ +NW  +  + + PP L     ATDT   + E+  V P +  +Q
Sbjct:  971 TSTFCGTPEFMAPEILLDKKYGRAVDWWAFGVLIYQMLLQQSPFRGEDEDEIYDAILADEPLYPIHMPRD--SVSILQKLLTREPDQRLGSGPTDAQEVMSQPFFRNINWDDIYHKRVQPPFLPQIKSATDTSNFDSEFTSVTPVLTPVQ 1118          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KPC1_DROME (Protein kinase C, brain isozyme OS=Drosophila melanogaster GN=Pkc53E PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18
Identity = 48/123 (39.02%), Postives = 71/123 (57.72%), Query Frame = -3
Query:  402 RASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG-SHEGANEIKKHPFFKGVNWALV--RCMNPP 761
            + + +F GT +YIAPEII    +  +VDWWA G+LLYEML G  PF G+  ++ FA I   ++ +P S   S  AK+     L + P  RLG    G  +++ HPFF+ ++W  +  R + PP
Sbjct:  504 KTTKTFCGTPDYIAPEIILYQPYGKSVDWWAYGVLLYEMLVGQPPFDGEDEEELFAAITDHNVSYPKS--LSKEAKEACKGFLTKQPNKRLGCGSSGEEDVRLHPFFRRIDWEKIENREVQPP 624          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: STK38_PONAB (Serine/threonine-protein kinase 38 OS=Pongo abelii GN=STK38 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18
Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = -3
Query:  417 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 749
            S VGT +YIAPE+    G+    DWW+LG+++YEML GY PF  +T Q+T+  +++  + L FP   P S  AK L+ R    + + R+G+  G  EIK + FF+GV+W  +R
Sbjct:  281 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLTFPPEVPISEKAKDLILRFC-CEWEHRIGA-PGVEEIKSNSFFEGVDWEHIR 391          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: STK38_HUMAN (Serine/threonine-protein kinase 38 OS=Homo sapiens GN=STK38 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18
Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = -3
Query:  417 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 749
            S VGT +YIAPE+    G+    DWW+LG+++YEML GY PF  +T Q+T+  +++  + L FP   P S  AK L+ R    + + R+G+  G  EIK + FF+GV+W  +R
Sbjct:  281 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLTFPPEVPISEKAKDLILRFC-CEWEHRIGA-PGVEEIKSNSFFEGVDWEHIR 391          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: STK38_BOVIN (Serine/threonine-protein kinase 38 OS=Bos taurus GN=STK38 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18
Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = -3
Query:  417 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 749
            S VGT +YIAPE+    G+    DWW+LG+++YEML GY PF  +T Q+T+  +++  + L FP   P S  AK L+ R    + + R+G+  G  EIK + FF+GV+W  +R
Sbjct:  281 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLTFPPEVPISEKAKDLILRFC-CEWEHRIGA-PGVEEIKNNSFFEGVDWEHIR 391          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PDPKA_DICDI (Probable serine/threonine-protein kinase pdkA OS=Dictyostelium discoideum GN=pdkA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18
Identity = 50/128 (39.06%), Postives = 76/128 (59.38%), Query Frame = -3
Query:  387 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE---GANEIKKHPFFKGVNWALVRCMN--PPELDAP 755
            +NSFVGT EY++PE+I+    ++  D WALG ++Y+M  G  PFRGKT   TF  + +++L +P +    +  K L+ +LL   P  RLGS     G + +K HPFF+  NW+ +  M+  PP +  P
Sbjct:  345 NNSFVGTAEYVSPELISNKETSTDSDLWALGCIIYQMASGRVPFRGKTEFLTFQKVSNRELVYPINMNPVI--KDLVEKLLVIKPTDRLGSSSTPGGFDNLKAHPFFQDFNWSSLSNMSHPPPPIQPP 470          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KPCT_MOUSE (Protein kinase C theta type OS=Mus musculus GN=Prkcq PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18
Identity = 48/138 (34.78%), Postives = 84/138 (60.87%), Query Frame = -3
Query:  357 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV--RCMNP---PELDAPLFATDTEKEY 755
            +N+F GT +YIAPEI+ G  +  +VDWW+ G+L+YEML G +PF G+  ++ F +I   +  +P        AK L+ +L  R+P+ RLG      +I++HP F+ +NW  +  + ++P   P++ +P   ++ +KE+
Sbjct:  536 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLVYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW--LEREAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEIDPPFRPKVKSPYDCSNFDKEF 668          
The following BLAST results are available for this feature:
BLAST of CB290810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
TRC_DROME1.419e-1840.71Serine/threonine-protein kinase tricorner OS=Droso... [more]
PRKX_HUMAN1.419e-1839.16Serine/threonine-protein kinase PRKX OS=Homo sapie... [more]
MASTL_MOUSE1.419e-1839.68Microtubule-associated serine/threonine-protein ki... [more]
KPC1_TRIRE1.419e-1835.33Protein kinase C-like OS=Trichoderma reesei GN=pkc... [more]
KPC1_DROME1.419e-1839.02Protein kinase C, brain isozyme OS=Drosophila mela... [more]
STK38_PONAB1.853e-1841.59Serine/threonine-protein kinase 38 OS=Pongo abelii... [more]
STK38_HUMAN1.853e-1841.59Serine/threonine-protein kinase 38 OS=Homo sapiens... [more]
STK38_BOVIN1.853e-1841.59Serine/threonine-protein kinase 38 OS=Bos taurus G... [more]
PDPKA_DICDI1.853e-1839.06Probable serine/threonine-protein kinase pdkA OS=D... [more]
KPCT_MOUSE1.853e-1834.78Protein kinase C theta type OS=Mus musculus GN=Prk... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290810 ID=CB290810; Name=CB290810; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTGAAGAAAGAGATAGAAAATGGATTAATTACCTATTAA
ATTAATAAAATACAAAACTTACAAAGTACCCACCCTTACAGATACAAACG
ATGCATACAAGTAATATATTACATACACAAGGCCTCCAAGATTATCTATC
GACGACAACTGCCGAGGTGAAAGCACAAGCAGAATCAATGAAACTGTTAT
TACTCGTCAAGTTGAGCTCCCCTTCCATAGCCTCTACTAAATGGGATGCA
CGTACCAACACAAATTTGCAGCAGACACTTCAAATAAAATAACAAAGAAT
TAGACTCCTCAGAAAACGTTTTGTTGCAGATCTTGCATTCCTGGATCCAC
AACTTTATACTCCTTCTCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCT
CAGGAGGGTTCATGCAACGAACTAGTGCCCAATTGACACCTTTGAAAAAT
GGATGCTTCTTTATTTCATTTGCTCCTTCATGCGAACCTAATCTGCTCTT
TGGATCTCTATGCAACAGGCGGTACATTAGCTGCTTTGCATGAAGACTTG
TCGGTGTACTTGACGGAAATTTGAGGTCTTTGTGGAGAATATTTGCAAAT
GTTTTTTGTCTTGTCTTGCCCCTGAATGGTGTGTATCCATAAAGCATTTC
ATACAGAAGAATTCCAAGAGCCCACCAGTCCACTGCACTTGTATGGCCTG
CACCGGCTATAATTTCCGGAGCTATATATTCTTCTGTGCCAACAAAAGAA
TTTGATGCTCGCATTGGTTCAGCCATGAAGACTGGATTCTGTTGGCCTTT
GTGGCGCCTTTTCTTTT
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