CB290810

Overview
NameCB290810
Unique NameCB290810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: GRK5_BOVIN (G protein-coupled receptor kinase 5 OS=Bos taurus GN=GRK5 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.616e-14
Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = -3
Query:  387 VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK----TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG-SHEGANEIKKHPFFKGVNWALVRC--MNPPELDAP 743
            VGT  Y+APE++    +  + D+W LG L+YEM+ G +PFRG+     R++    +L  +  +  S   S  AK +   LL +D K RLG   EGA E+K+HPFF+ +N+  +    ++PP +  P
Sbjct:  346 VGTVGYMAPEVLNNQRYGLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVY--SHKFSEEAKSICKMLLTKDAKQRLGCQEEGAAEVKRHPFFRNMNFKRLEAGMLDPPFVPDP 469          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PPK35_SCHPO (Serine/threonine-protein kinase ppk35 OS=Schizosaccharomyces pombe GN=ppk35 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.723e-14
Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = -3
Query:  429 NSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQL---------MYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 752
            NS VG+ EY+APE++ G  +   VD+W+LG + YE L GY PF G T Q+T+ N+ +  + L+ PS     ++ K+                 +P SR    +   EI+KHPFFK ++W
Sbjct:  355 NSVVGSPEYMAPEVVYGKKYDRTVDYWSLGCICYECLVGYPPFSGSTLQETWTNLYYWREMLQRPSKNENGIYDKKARSVSDEAWSFITKCLTEPTSRF---QSTIEIQKHPFFKRLHW 470          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: GRK6_RAT (G protein-coupled receptor kinase 6 OS=Rattus norvegicus GN=Grk6 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.723e-14
Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = -3
Query:  429 VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF--RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNW 743
            VGT  Y+APE++    +T + DWWALG LLYEM+ G +PF  R K  ++     L K++    +   S  A+ L  +L ++DP  RLG    GA E+K+HP FK +N+
Sbjct:  346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVAEEYTDRFSPQARSLCSQLPNKDPAERLGCRGGGAREVKEHPLFKKLNF 453          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: LATS2_MOUSE (Serine/threonine-protein kinase LATS2 OS=Mus musculus GN=Lats2 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14
Identity = 40/112 (35.71%), Postives = 66/112 (58.93%), Query Frame = -3
Query:  426 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 755
            ++S VGT  YIAPE++   G+T   DWW++G++L+EML G  PF   T  +T   +++    L  P+    S  A+ L+ +L       RLG  +GA+++K HPFF  ++++
Sbjct:  828 AHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWESTLHIPTQVRLSAEARDLITKLCCA-ADCRLG-RDGADDLKAHPFFNTIDFS 937          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: LATS2_HUMAN (Serine/threonine-protein kinase LATS2 OS=Homo sapiens GN=LATS2 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14
Identity = 40/112 (35.71%), Postives = 65/112 (58.04%), Query Frame = -3
Query:  426 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 755
            ++S VGT  YIAPE++   G+T   DWW++G++L+EML G  PF   T  +T   +++    L  P+    S  A+ L+ +L       RLG   GA+++K HPFF  ++++
Sbjct:  870 AHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPAQVKLSPEARDLITKLC-CSADHRLG-RNGADDLKAHPFFSAIDFS 979          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: AURKB_RAT (Serine/threonine-protein kinase 12 OS=Rattus norvegicus GN=Aurkb PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.168e-14
Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = -3
Query:  441 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 767
            P     +  GT +Y+ PE+I G  H   VD W +G+L YE++ G  PF   +  +T+  I+  DLKFPSS P  L AK L+ +LL  +P  RL       ++  HP+ +
Sbjct:  229 PSLRRKTMCGTLDYLPPEMIEGRMHNEMVDLWCIGVLCYELMVGNPPFESPSHSETYRRIVKVDLKFPSSMP--LGAKDLISKLLKHNPSQRL----PLEQVSAHPWVR 331          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: AURKB_HUMAN (Serine/threonine-protein kinase 12 OS=Homo sapiens GN=AURKB PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.052e-13
Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = -3
Query:  441 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 767
            P     +  GT +Y+ PE+I G  H   VD W +G+L YE+L G  PF   +  +T+  I+  DLKFP+S PT   A+ L+ +LL  +P  RL       ++  HP+ +
Sbjct:  226 PSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTG--AQDLISKLLRHNPSERL----PLAQVSAHPWVR 328          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: AURKB_BOVIN (Serine/threonine-protein kinase 12 OS=Bos taurus GN=AURKB PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.052e-13
Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = -3
Query:  441 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 767
            P     +  GT +Y+ PE+I G  H   VD W +G+L YE+L G  PF   +  +T+  I+  DLKFP S P  L A+  +Y+LL  +P  RL       ++  HP+ +
Sbjct:  226 PSLRRKTMCGTLDYLPPEMIEGRTHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPPSVP--LGAQDFIYKLLKHNPSERL----PLAQVSAHPWVR 328          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: GPRK1_DROME (G protein-coupled receptor kinase 1 OS=Drosophila melanogaster GN=Gprk1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.374e-13
Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = -3
Query:  429 VGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFR-GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG-SHEGANEIKKHPFFKGVNW 743
            VGT  Y+APE+++ G  + S  DW++ G +LY++L G++PFR  KT+ K   + +   +        SL  K L+  LL RD   RLG    GA+E+K H FF G++W
Sbjct:  352 VGTHGYMAPEVLSKGTSYDSCADWFSFGCMLYKLLKGHSPFRQHKTKDKLEIDKMTLTMNVELPESFSLELKNLLEMLLQRDVSKRLGCMGNGADEVKMHNFFCGIDW 459          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: AUR2_ARATH (Serine/threonine-protein kinase Aurora-2 OS=Arabidopsis thaliana GN=AUR2 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.374e-13
Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = -3
Query:  447 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 740
            GT +Y+ PE++    H ++VD W+LGIL YE LYG  PF  +   +T+  I+  DLKFP     S  AK L+ ++L ++   RL  H    ++ +HP+
Sbjct:  176 GTLDYLPPEMVESVEHDASVDIWSLGILCYEFLYGVPPFEAREHSETYKRIVQVDLKFPPKPIVSSSAKDLISQMLVKESTQRLALH----KLLEHPW 269          
The following BLAST results are available for this feature:
BLAST of CB290810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
GRK5_BOVIN3.616e-1436.51G protein-coupled receptor kinase 5 OS=Bos taurus ... [more]
PPK35_SCHPO4.723e-1436.13Serine/threonine-protein kinase ppk35 OS=Schizosac... [more]
GRK6_RAT4.723e-1440.74G protein-coupled receptor kinase 6 OS=Rattus norv... [more]
LATS2_MOUSE6.168e-1435.71Serine/threonine-protein kinase LATS2 OS=Mus muscu... [more]
LATS2_HUMAN6.168e-1435.71Serine/threonine-protein kinase LATS2 OS=Homo sapi... [more]
AURKB_RAT6.168e-1436.70Serine/threonine-protein kinase 12 OS=Rattus norve... [more]
AURKB_HUMAN1.052e-1335.78Serine/threonine-protein kinase 12 OS=Homo sapiens... [more]
AURKB_BOVIN1.052e-1335.78Serine/threonine-protein kinase 12 OS=Bos taurus G... [more]
GPRK1_DROME1.374e-1338.89G protein-coupled receptor kinase 1 OS=Drosophila ... [more]
AUR2_ARATH1.374e-1337.76Serine/threonine-protein kinase Aurora-2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290810 ID=CB290810; Name=CB290810; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTGAAGAAAGAGATAGAAAATGGATTAATTACCTATTAA
ATTAATAAAATACAAAACTTACAAAGTACCCACCCTTACAGATACAAACG
ATGCATACAAGTAATATATTACATACACAAGGCCTCCAAGATTATCTATC
GACGACAACTGCCGAGGTGAAAGCACAAGCAGAATCAATGAAACTGTTAT
TACTCGTCAAGTTGAGCTCCCCTTCCATAGCCTCTACTAAATGGGATGCA
CGTACCAACACAAATTTGCAGCAGACACTTCAAATAAAATAACAAAGAAT
TAGACTCCTCAGAAAACGTTTTGTTGCAGATCTTGCATTCCTGGATCCAC
AACTTTATACTCCTTCTCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCT
CAGGAGGGTTCATGCAACGAACTAGTGCCCAATTGACACCTTTGAAAAAT
GGATGCTTCTTTATTTCATTTGCTCCTTCATGCGAACCTAATCTGCTCTT
TGGATCTCTATGCAACAGGCGGTACATTAGCTGCTTTGCATGAAGACTTG
TCGGTGTACTTGACGGAAATTTGAGGTCTTTGTGGAGAATATTTGCAAAT
GTTTTTTGTCTTGTCTTGCCCCTGAATGGTGTGTATCCATAAAGCATTTC
ATACAGAAGAATTCCAAGAGCCCACCAGTCCACTGCACTTGTATGGCCTG
CACCGGCTATAATTTCCGGAGCTATATATTCTTCTGTGCCAACAAAAGAA
TTTGATGCTCGCATTGGTTCAGCCATGAAGACTGGATTCTGTTGGCCTTT
GTGGCGCCTTTTCTTTT
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