CB290810

Overview
NameCB290810
Unique NameCB290810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: Y1558_DICDI (Probable serine/threonine-protein kinase DDB_G0278845 OS=Dictyostelium discoideum GN=DDB_G0278845 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.795e-13
Identity = 47/137 (34.31%), Postives = 70/137 (51.09%), Query Frame = -3
Query:  357 RASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDTEKEY 761
            R + S VG+  Y+APE++ A  G+   VDWW+LG + YE ++G  PF G + ++    +L            S     L+  L++ D  +RLGS E G   IK H FF GV W  +  ++PP +  PL   D +  Y
Sbjct:  976 RLAYSVVGSPFYMAPEVLQATRGYGDEVDWWSLGCMFYEFIFGVPPFDGDSPEEVMETVLKWKTMLQRPDGVSDELWDLISGLIN-DGSTRLGSGEKGVENIKNHIFFNGVPWGKLHDLDPPFV--PLLQGDYDTTY 1109          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KSG1_SCHPO (Serine/threonine-protein kinase ksg1 OS=Schizosaccharomyces pombe GN=ksg1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.795e-13
Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = -3
Query:  429 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 770
            +P   S SFVGT  Y++PE+++     +A D WA G +L++ML G  PF       TF +ILH   + P     S  A  L+ +LL  DPK RL      +EI +HPFF G+ +
Sbjct:  264 KPQAHSRSFVGTARYVSPEVLSDKIAGTASDIWAFGCILFQMLAGKPPFVAGNEYLTFQSILHLSYEIPPD--ISDVASDLIKKLLVLDPKDRL----TVDEIHQHPFFNGIKF 371          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: AURK_DICDI (Probable serine/threonine-protein kinase aurK OS=Dictyostelium discoideum GN=aurK PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.795e-13
Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = -3
Query:  384 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPL 767
            P    ++F GT EY+ PE+I   G+    D W+LGIL++E L G +PF     +  F NI   D+ +PSS   S  AK L+ RLL  DP  R+       ++  HP+ K    A  + + P +L  PL
Sbjct:  259 PNTKRSTFCGTLEYLPPEVIEKKGYDQTADVWSLGILIFEFLVGRSPFTSDEEKNIFHNIQENDVYYPSS--ISPEAKDLISRLLVSDPHQRI----TLKDVINHPWIK--KHAHPKSLEPTKLGLPL 378          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: AIR2_CAEEL (Aurora/Ipl1-related protein kinase 2 OS=Caenorhabditis elegans GN=air-2 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.795e-13
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = -3
Query:  393 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELD 767
            P     +  GT +Y+ PE++ GA H+ AVD WA+G+L YE L G  PF  + + KT+A I      +P S      A+ L+ RLL  DPK+R        ++K+H + +G+  A +R     +++
Sbjct:  179 PSNKRQTMCGTMDYLPPEMVNGADHSDAVDLWAIGVLCYEFLVGKPPFEHEDQSKTYAAIKAARFTYPDSVKKG--ARDLIGRLLVVDPKARC----TLEQVKEHYWIQGMMEAKIRAEKQQKIE 297          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: NDRC_DICDI (Probable serine/threonine-protein kinase ndrC OS=Dictyostelium discoideum GN=ndrC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.344e-13
Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = -3
Query:  429 MAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSST-PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 776
            MA     ++S VG+ EY++PEI+   G+    D+W+LG +  EML G+ PF   T    F NIL   + L +P  T   S+ A  L+  +L   P  RLG  +G  + K HPFFK  NW
Sbjct:  908 MAYRRPIAHSAVGSPEYMSPEIVNDQGYDMTCDYWSLGCVFVEMLCGFNPFCADTPNDVFINILRWKETLDWPLFTQELSVEAADLLKNMLMEQP-HRLGG-KGKQDFKNHPFFKNHNW 1024          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: GEK_DROME (Serine/threonine-protein kinase Genghis Khan OS=Drosophila melanogaster GN=gek PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.344e-13
Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = -3
Query:  369 SNSFVGTEEYIAPEIIA----GAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD--LKFPSSTPTSLHAKQLMYRLLHR---DPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 755
            SN  VGT +YI+PEI+     G G + +  DWW+LG+ +YEMLYG TPF  ++  +T+  I++       PS    +    +    LL +    P++RLG + G  +   HP+F G++W  +R    P +      TDT
Sbjct:  257 SNVAVGTPDYISPEILRAMEDGKGRYGTECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNCFNLPSQETLNYKVSETSQDLLCKLICIPENRLGQN-GIQDFMDHPWFVGIDWKNIRQGPAPYVPEVSSPTDT 394          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: ARBK2_RAT (Beta-adrenergic receptor kinase 2 OS=Rattus norvegicus GN=Adrbk2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.344e-13
Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = -3
Query:  387 VGTEEYIAPEIIA-GAGHTSAVDWWALGILLYEMLYGYTPFR-GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMN-PPELDAP 743
            VGT  Y+APE++  G  + S+ DW++LG +L+++L G++PFR  KT+ K   + +   +        S   + L+  LL RD   RLG +  GA E+K+H FFKG++W  V     PP L  P
Sbjct:  351 VGTHGYMAPEVLQKGTCYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVQLPDAFSPELRSLLEGLLQRDVSQRLGCYGGGARELKEHIFFKGIDWQYVYLRKYPPPLIPP 473          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: ROCK2_RAT (Rho-associated protein kinase 2 OS=Rattus norvegicus GN=Rock2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.061e-13
Identity = 46/111 (41.44%), Postives = 62/111 (55.86%), Query Frame = -3
Query:  429 VGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL-HKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 743
            VGT +YI+PE++   G    +    DWW++G+ L+EML G TPF   +   T++ I+ HK+ L FP  T  S HAK L+   L  D + RLG   G  EIK   FFK   W
Sbjct:  242 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDTEISKHAKNLICAFL-TDREVRLG-RNGVEEIKSASFFKNDQW 350          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: IPL1_ASHGO (Spindle assembly checkpoint kinase OS=Ashbya gossypii GN=IPL1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.061e-13
Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = -3
Query:  441 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 740
            GT +Y++PE+I    +   VD WALG+L YE+L G  PF  ++++ T+  IL ++L FP    T   A+ L+ RLL  DP  R+       E+KKHP+ +
Sbjct:  268 GTVDYLSPELIRSREYNEKVDVWALGVLTYELLVGSPPFEEESKELTYKRILKRNLIFPDHVDT--EARHLISRLLEYDPGDRI----PLKEVKKHPWIE 361          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: GRK4_HUMAN (G protein-coupled receptor kinase 4 OS=Homo sapiens GN=GRK4 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.061e-13
Identity = 44/120 (36.67%), Postives = 69/120 (57.50%), Query Frame = -3
Query:  402 VGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRC--MNPP 743
            VGT  Y+APE++    +T + DWW LG L+YEM+ G++PF+ K ++K     + + +K  +   S   S  AK +   LL ++P  RLG   EGA  +K+HP FK +N+  +    + PP
Sbjct:  347 VGTVGYMAPEVVNNEKYTFSPDWWGLGCLIYEMIQGHSPFK-KYKEKVKWEEVDQRIKNDTEEYSEKFSEDAKSICRMLLTKNPSKRLGCRGEGAAGVKQHPVFKDINFRRLEANMLEPP 465          
The following BLAST results are available for this feature:
BLAST of CB290810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
Y1558_DICDI1.795e-1334.31Probable serine/threonine-protein kinase DDB_G0278... [more]
KSG1_SCHPO1.795e-1338.60Serine/threonine-protein kinase ksg1 OS=Schizosacc... [more]
AURK_DICDI1.795e-1335.94Probable serine/threonine-protein kinase aurK OS=D... [more]
AIR2_CAEEL1.795e-1333.60Aurora/Ipl1-related protein kinase 2 OS=Caenorhabd... [more]
NDRC_DICDI2.344e-1338.66Probable serine/threonine-protein kinase ndrC OS=D... [more]
GEK_DROME2.344e-1333.81Serine/threonine-protein kinase Genghis Khan OS=Dr... [more]
ARBK2_RAT2.344e-1337.40Beta-adrenergic receptor kinase 2 OS=Rattus norveg... [more]
ROCK2_RAT3.061e-1341.44Rho-associated protein kinase 2 OS=Rattus norvegic... [more]
IPL1_ASHGO3.061e-1339.00Spindle assembly checkpoint kinase OS=Ashbya gossy... [more]
GRK4_HUMAN3.061e-1336.67G protein-coupled receptor kinase 4 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290810 ID=CB290810; Name=CB290810; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTGAAGAAAGAGATAGAAAATGGATTAATTACCTATTAA
ATTAATAAAATACAAAACTTACAAAGTACCCACCCTTACAGATACAAACG
ATGCATACAAGTAATATATTACATACACAAGGCCTCCAAGATTATCTATC
GACGACAACTGCCGAGGTGAAAGCACAAGCAGAATCAATGAAACTGTTAT
TACTCGTCAAGTTGAGCTCCCCTTCCATAGCCTCTACTAAATGGGATGCA
CGTACCAACACAAATTTGCAGCAGACACTTCAAATAAAATAACAAAGAAT
TAGACTCCTCAGAAAACGTTTTGTTGCAGATCTTGCATTCCTGGATCCAC
AACTTTATACTCCTTCTCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCT
CAGGAGGGTTCATGCAACGAACTAGTGCCCAATTGACACCTTTGAAAAAT
GGATGCTTCTTTATTTCATTTGCTCCTTCATGCGAACCTAATCTGCTCTT
TGGATCTCTATGCAACAGGCGGTACATTAGCTGCTTTGCATGAAGACTTG
TCGGTGTACTTGACGGAAATTTGAGGTCTTTGTGGAGAATATTTGCAAAT
GTTTTTTGTCTTGTCTTGCCCCTGAATGGTGTGTATCCATAAAGCATTTC
ATACAGAAGAATTCCAAGAGCCCACCAGTCCACTGCACTTGTATGGCCTG
CACCGGCTATAATTTCCGGAGCTATATATTCTTCTGTGCCAACAAAAGAA
TTTGATGCTCGCATTGGTTCAGCCATGAAGACTGGATTCTGTTGGCCTTT
GTGGCGCCTTTTCTTTT
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