CB290810

Overview
NameCB290810
Unique NameCB290810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6A4_HUMAN (Ribosomal protein S6 kinase alpha-4 OS=Homo sapiens GN=RPS6KA4 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.608e-22
Identity = 63/159 (39.62%), Postives = 88/159 (55.35%), Query Frame = -3
Query:  342 FMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLH--AKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALVRCMNPP---------ELDAPLFATDTEKEYKVVDP 779
            F+ E    + SF GT EY+APEII    GH  AVDWW+LGILL+E+L G +PF  +  + T A +  + LK     P  +   A+ L+ RLL +DPK RLG+  +GA E++ HPFF+G++W  +     P         ELD   FA +  +   V  P
Sbjct:  186 FLTEEKERTFSFCGTIEYMAPEIIRSKTGHGKAVDWWSLGILLFELLTGASPFTLEGERNTQAEVSRRILKCSPPFPPRIGPVAQDLLQRLLCKDPKKRLGAGPQGAQEVRNHPFFQGLDWVALAARKIPAPFRPQIRSELDVGNFAEEFTRLEPVYSP 344          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: YPK2_YEAST (Serine/threonine-protein kinase YPK2/YKR2 OS=Saccharomyces cerevisiae GN=YPK2 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.712e-22
Identity = 59/141 (41.84%), Postives = 81/141 (57.45%), Query Frame = -3
Query:  360 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW--ALVRCMNPP-------ELDAPLFATDTEKE 755
            +++F GT EY+APEI+ G G+T  VDWW LGILLYEM+ G  P+  +     +  IL + L FP     +  AK L+  LL RDP  RLG + G +EI+ HPFFK ++W   L++   PP       E+D   F  +  KE
Sbjct:  499 TDTFCGTPEYLAPEILLGQGYTKTVDWWTLGILLYEMMTGLPPYYDENVPVMYKKILQQPLLFPDGFDPA--AKDLLIGLLSRDPSRRLGVN-GTDEIRNHPFFKDISWKKLLLKGYIPPYKPIVKSEIDTANFDQEFTKE 636          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PKN1_HUMAN (Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.712e-22
Identity = 52/121 (42.98%), Postives = 79/121 (65.29%), Query Frame = -3
Query:  402 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNW--ALVRCMNPP 755
            +++F GT E++APE++    +T AVDWW LG+LLYEML G +PF G   ++ F +I++ ++++P     S  A  +M RLL R+P+ RLGS E  A ++KK PFF+ + W   L R + PP
Sbjct:  772 TSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRF--LSAEAIGIMRRLLRRNPERRLGSSERDAEDVKKQPFFRTLGWEALLARRLPPP 890          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KPK1_ARATH (Serine/threonine-protein kinase AtPK1/AtPK6 OS=Arabidopsis thaliana GN=ATPK1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.712e-22
Identity = 56/113 (49.56%), Postives = 72/113 (63.72%), Query Frame = -3
Query:  429 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF---RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNW 755
            SNS  GT EY+APEI+ G GH  A DWW++GILLYEML G  PF   +GK +QK    I+   +K P       HA  ++  LL ++P+ RLGS   GA EIK+H +FKG+NW
Sbjct:  288 SNSMCGTTEYMAPEIVRGKGHDKAADWWSVGILLYEMLTGKPPFLGSKGKIQQK----IVKDKIKLPQFLSNEAHA--ILKGLLQKEPERRLGSGLSGAEEIKQHKWFKGINW 394          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KPK19_ARATH (Serine/threonine-protein kinase AtPK19 OS=Arabidopsis thaliana GN=ATPK19 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.712e-22
Identity = 57/113 (50.44%), Postives = 71/113 (62.83%), Query Frame = -3
Query:  429 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF---RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNW 755
            SNS  GT EY+APEI+ G GH  A DWW++GILLYEML G  PF   +GK +QK    I+   +K P       HA  L+  LL ++P+ RLGS   GA EIKKH +FK +NW
Sbjct:  294 SNSMCGTTEYMAPEIVRGKGHDKAADWWSVGILLYEMLTGKPPFLGSKGKIQQK----IVKDKIKLPQFLSNEAHA--LLKGLLQKEPERRLGSGPSGAEEIKKHKWFKAINW 400          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PKN2_RAT (Serine/threonine-protein kinase N2 OS=Rattus norvegicus GN=Pkn2 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.154e-22
Identity = 50/121 (41.32%), Postives = 81/121 (66.94%), Query Frame = -3
Query:  402 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWA--LVRCMNPP 755
            +++F GT E++APE++    +T AVDWW LG+L+YEML G +PF G   ++ F +I++ ++++P    T   A  +M RLL R+P+ RLG+ E  A ++KKHPFF+  +W+  L + + PP
Sbjct:  815 TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLST--EAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLTDWSALLDKKVKPP 933          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: SAX1_CAEBR (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis briggsae GN=sax-1 PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.038e-22
Identity = 50/118 (42.37%), Postives = 76/118 (64.41%), Query Frame = -3
Query:  402 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 749
            S VGT +YIAPE+    G+T + DWW+LG+++YEML GY PF  +  Q+T+  +++  + L FPS  P S+ AK  + R    + + RLG+H G +EIK+ PFF+ ++W  +R   PP
Sbjct:  279 STVGTPDYIAPEVFQPNGYTKSCDWWSLGVIMYEMLIGYPPFCSELPQETYRKVINWQQTLVFPSDVPISIEAKATIKRFC-CEAERRLGNHGGLDEIKQCPFFRRIDWNHIRERPPP 395          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PKN2_MOUSE (Serine/threonine-protein kinase N2 OS=Mus musculus GN=Pkn2 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.038e-22
Identity = 49/121 (40.50%), Postives = 81/121 (66.94%), Query Frame = -3
Query:  402 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALV--RCMNPP 755
            +++F GT E++APE++    +T AVDWW LG+L+YEML G +PF G   ++ F +I++ ++++P    T   A  +M RLL R+P+ RLG+ E  A ++KKHPFF+  +W+ +  + + PP
Sbjct:  813 TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLST--EAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLTDWSALMDKKVKPP 931          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6AA_XENLA (Ribosomal protein S6 kinase 2 alpha OS=Xenopus laevis GN=rps6ka PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.038e-22
Identity = 58/130 (44.62%), Postives = 79/130 (60.77%), Query Frame = -3
Query:  369 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALV--RCMNPPELDAPLFATDT 749
            SF GT EY+APE++   GH+ + DWW+ G+L++EML G  PF+GK R++T   IL   L  P     S  A+ L+  L  R+P +RLGS  EGA EIK+ PFF  ++W  +  R M+PP   A   A DT
Sbjct:  221 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF--LSNEAQSLLRALFKRNPTNRLGSAMEGAEEIKRQPFFSTIDWNKLFRREMSPPFKPAVTQADDT 348          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: CBK1_CANGA (Serine/threonine-protein kinase CBK1 OS=Candida glabrata GN=CBK1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.038e-22
Identity = 55/129 (42.64%), Postives = 76/129 (58.91%), Query Frame = -3
Query:  369 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 749
            S VGT +YIAPEI    G+    DWW+LG ++YE L G+ PF  +T Q+T+  I++  + L+FP     S  A+ L+ RLL      RLG   GA+EIK HPFF+GV+W  +R +  P +      TDT
Sbjct:  584 STVGTPDYIAPEIFLYQGYGQDCDWWSLGAIMYECLIGWPPFCSETPQETYRKIMNFEQTLQFPEDVHISYEAEDLIRRLLTHS-NQRLGRQGGADEIKSHPFFRGVDWNTIRQVEAPYIPKLSSITDT 711          
The following BLAST results are available for this feature:
BLAST of CB290810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
KS6A4_HUMAN3.608e-2239.62Ribosomal protein S6 kinase alpha-4 OS=Homo sapien... [more]
YPK2_YEAST4.712e-2241.84Serine/threonine-protein kinase YPK2/YKR2 OS=Sacch... [more]
PKN1_HUMAN4.712e-2242.98Serine/threonine-protein kinase N1 OS=Homo sapiens... [more]
KPK1_ARATH4.712e-2249.56Serine/threonine-protein kinase AtPK1/AtPK6 OS=Ara... [more]
KPK19_ARATH4.712e-2250.44Serine/threonine-protein kinase AtPK19 OS=Arabidop... [more]
PKN2_RAT6.154e-2241.32Serine/threonine-protein kinase N2 OS=Rattus norve... [more]
SAX1_CAEBR8.038e-2242.37Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]
PKN2_MOUSE8.038e-2240.50Serine/threonine-protein kinase N2 OS=Mus musculus... [more]
KS6AA_XENLA8.038e-2244.62Ribosomal protein S6 kinase 2 alpha OS=Xenopus lae... [more]
CBK1_CANGA8.038e-2242.64Serine/threonine-protein kinase CBK1 OS=Candida gl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290810 ID=CB290810; Name=CB290810; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTGAAGAAAGAGATAGAAAATGGATTAATTACCTATTAA
ATTAATAAAATACAAAACTTACAAAGTACCCACCCTTACAGATACAAACG
ATGCATACAAGTAATATATTACATACACAAGGCCTCCAAGATTATCTATC
GACGACAACTGCCGAGGTGAAAGCACAAGCAGAATCAATGAAACTGTTAT
TACTCGTCAAGTTGAGCTCCCCTTCCATAGCCTCTACTAAATGGGATGCA
CGTACCAACACAAATTTGCAGCAGACACTTCAAATAAAATAACAAAGAAT
TAGACTCCTCAGAAAACGTTTTGTTGCAGATCTTGCATTCCTGGATCCAC
AACTTTATACTCCTTCTCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCT
CAGGAGGGTTCATGCAACGAACTAGTGCCCAATTGACACCTTTGAAAAAT
GGATGCTTCTTTATTTCATTTGCTCCTTCATGCGAACCTAATCTGCTCTT
TGGATCTCTATGCAACAGGCGGTACATTAGCTGCTTTGCATGAAGACTTG
TCGGTGTACTTGACGGAAATTTGAGGTCTTTGTGGAGAATATTTGCAAAT
GTTTTTTGTCTTGTCTTGCCCCTGAATGGTGTGTATCCATAAAGCATTTC
ATACAGAAGAATTCCAAGAGCCCACCAGTCCACTGCACTTGTATGGCCTG
CACCGGCTATAATTTCCGGAGCTATATATTCTTCTGTGCCAACAAAAGAA
TTTGATGCTCGCATTGGTTCAGCCATGAAGACTGGATTCTGTTGGCCTTT
GTGGCGCCTTTTCTTTT
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