CB290810

Overview
NameCB290810
Unique NameCB290810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: IPL1_YEAST (Spindle assembly checkpoint kinase OS=Saccharomyces cerevisiae GN=IPL1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 35/107 (32.71%), Postives = 58/107 (54.21%), Query Frame = -3 
Query:  447 PMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 767
            P     +  GT +Y++PE++    +   +D WALG+L +E+L G  PF  + +  T+  I   D+K PS+   S  A+ L+ +LL  DPK R+       ++K HP+
Sbjct:  254 PENRRKTVCGTIDYLSPEMVESREYDHTIDAWALGVLAFELLTGAPPFEEEMKDTTYKRIAALDIKMPSN--ISQDAQDLILKLLKYDPKDRM----RLGDVKMHPW 354
[Close]
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: IPL1_ENCCU (Probable spindle assembly checkpoint kinase homolog OS=Encephalitozoon cuniculi GN=IPL1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11
Identity = 40/101 (39.60%), Postives = 49/101 (48.51%), Query Frame = -3 
Query:  447 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 749
            +F GT EY+APE++    H S +D W LGIL YE L G TPF  K R    A      LK+      S +A   + RLL   P  R+   E  N    HPF
Sbjct:  166 TFCGTMEYLAPEMVNNDIHDSGIDLWCLGILTYEFLMGKTPFESKNRNMREAYKKINSLKYTIPETISSNASDFISRLLVLSPGDRMELTEALN----HPF 262
The following BLAST results are available for this feature:
BLAST of CB290810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
IPL1_YEAST8.337e-1132.71Spindle assembly checkpoint kinase OS=Saccharomyce... [more]
IPL1_ENCCU8.337e-1139.60Probable spindle assembly checkpoint kinase homolo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290810 ID=CB290810; Name=CB290810; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTGAAGAAAGAGATAGAAAATGGATTAATTACCTATTAA
ATTAATAAAATACAAAACTTACAAAGTACCCACCCTTACAGATACAAACG
ATGCATACAAGTAATATATTACATACACAAGGCCTCCAAGATTATCTATC
GACGACAACTGCCGAGGTGAAAGCACAAGCAGAATCAATGAAACTGTTAT
TACTCGTCAAGTTGAGCTCCCCTTCCATAGCCTCTACTAAATGGGATGCA
CGTACCAACACAAATTTGCAGCAGACACTTCAAATAAAATAACAAAGAAT
TAGACTCCTCAGAAAACGTTTTGTTGCAGATCTTGCATTCCTGGATCCAC
AACTTTATACTCCTTCTCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCT
CAGGAGGGTTCATGCAACGAACTAGTGCCCAATTGACACCTTTGAAAAAT
GGATGCTTCTTTATTTCATTTGCTCCTTCATGCGAACCTAATCTGCTCTT
TGGATCTCTATGCAACAGGCGGTACATTAGCTGCTTTGCATGAAGACTTG
TCGGTGTACTTGACGGAAATTTGAGGTCTTTGTGGAGAATATTTGCAAAT
GTTTTTTGTCTTGTCTTGCCCCTGAATGGTGTGTATCCATAAAGCATTTC
ATACAGAAGAATTCCAAGAGCCCACCAGTCCACTGCACTTGTATGGCCTG
CACCGGCTATAATTTCCGGAGCTATATATTCTTCTGTGCCAACAAAAGAA
TTTGATGCTCGCATTGGTTCAGCCATGAAGACTGGATTCTGTTGGCCTTT
GTGGCGCCTTTTCTTTT
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