CB290810

Overview
NameCB290810
Unique NameCB290810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: Y0670_DICDI (Probable serine/threonine-protein kinase DDB_G0288795 OS=Dictyostelium discoideum GN=DDB_G0288795 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.050e-21
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = -3
Query:  402 GTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG-ANEIKKHPFFKGVNWA--LVRCMNPP 740
            G+ EY+APEII G G++ +VDWWALG L YEM+ G  PF  +   +    IL   LKFP     S +A  L+  LL+RDP  RLGS E    EIK HPFFK VNW+  L + ++PP
Sbjct:  333 GSPEYVAPEIINGTGYSKSVDWWALGTLFYEMIAGLPPFYSEDPHEMTKLILSSPLKFPPQ--ISKNAASLVSLLLNRDPSKRLGSGESDVEEIKAHPFFKNVNWSKLLNKEVDPP 446          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: SCK2_SCHPO (Serine/threonine-protein kinase sck2 OS=Schizosaccharomyces pombe GN=sck2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.050e-21
Identity = 57/147 (38.78%), Postives = 87/147 (59.18%), Query Frame = -3
Query:  345 SNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC--MNPP-------ELDAPLFATDTEKEYKVVD 755
            + +F GT +Y+APE+I   AG+   VD+W+LG+LLYEM  G++PF     Q+ + NI+   ++FP     S+ A+ L+  LL+R+PK RLG+H    E+ KHPFF G++W  +    ++PP       E+D   F  D E   K +D
Sbjct:  424 TRTFCGTTDYLAPEVILDEAGYDMMVDFWSLGVLLYEMTCGWSPFYADNTQQLYKNIVFGKVRFPRGL-LSVEARDLIKLLLNRNPKHRLGAHGDVEEVMKHPFFDGIDWKKLAAKEISPPFKPIVEGEIDVSNF--DVEFTNKAID 567          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PKN1_RAT (Serine/threonine-protein kinase N1 OS=Rattus norvegicus GN=Pkn1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.371e-21
Identity = 51/121 (42.15%), Postives = 79/121 (65.29%), Query Frame = -3
Query:  402 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNW--ALVRCMNPP 755
            +++F GT E++APE++    +T AVDWW LG+ LYEML G +PF G   ++ F +I++ ++++P     S  A  +M RLL R+P+ RLGS E  A ++KK PFF+ ++W   L R + PP
Sbjct:  776 TSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVFLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRF--LSAEAIGIMRRLLRRNPERRLGSTERDAEDVKKQPFFRTLDWDALLARRLPPP 894          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: SAX1_CAEEL (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis elegans GN=sax-1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.339e-21
Identity = 50/118 (42.37%), Postives = 75/118 (63.56%), Query Frame = -3
Query:  402 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPP 749
            S VGT +YIAPE+    G+T + DWW+LG+++YEML GY PF  +  Q+T+  +++  + L FPS  P S+ AK  + R    + + RLG+H G +EIK+ PF K ++W  +R   PP
Sbjct:  279 STVGTPDYIAPEVFQPNGYTKSCDWWSLGVIMYEMLIGYPPFCSELPQETYRKVINWQQTLVFPSDVPISIEAKATIKRFC-CEAERRLGNHGGLDEIKQCPFVKRIDWNHIRERPPP 395          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: SGK2_RAT (Serine/threonine-protein kinase Sgk2 OS=Rattus norvegicus GN=Sgk2 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.989e-21
Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = -3
Query:  429 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 770
            EP   +++F GT EY+APE++    +  AVDWW LG +LYEML+G  PF      + + NILH+ L+ P     ++ A  L+  LLH+D + RLGS E   +IK H FF  +NW
Sbjct:  186 EPEETTSTFCGTPEYLAPEVLRKEPYDRAVDWWCLGAVLYEMLHGLPPFFNTDVAQMYENILHQPLQIPGG--RTVAACDLLQGLLHKDQRQRLGSKEDFLDIKNHMFFSPINW 297          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: SGK2_MOUSE (Serine/threonine-protein kinase Sgk2 OS=Mus musculus GN=Sgk2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.989e-21
Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = -3
Query:  429 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 770
            EP   +++F GT EY+APE++    +  AVDWW LG +LYEML+G  PF      + + NILH+ L+ P     ++ A  L+  LLH+D + RLGS E   +IK H FF  +NW
Sbjct:  186 EPEETTSTFCGTPEYLAPEVLRKEPYDRAVDWWCLGAVLYEMLHGLPPFFNTDVAQMYENILHQPLQIPGG--RTVAACDLLQGLLHKDQRQRLGSKEDFLDIKNHMFFSPINW 297          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: SGK2_HUMAN (Serine/threonine-protein kinase Sgk2 OS=Homo sapiens GN=SGK2 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.989e-21
Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = -3
Query:  429 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 770
            EP   +++F GT EY+APE++    +  AVDWW LG +LYEML+G  PF  +   + + NILH+ L+ P     ++ A  L+  LLH+D + RLGS     EIK H FF  +NW
Sbjct:  246 EPEDTTSTFCGTPEYLAPEVLRKEPYDRAVDWWCLGAVLYEMLHGLPPFYSQDVSQMYENILHQPLQIPGG--RTVAACDLLQSLLHKDQRQRLGSKADFLEIKNHVFFSPINW 357          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6A6_DANRE (Ribosomal protein S6 kinase alpha-6 OS=Danio rerio GN=rps6ka6 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.989e-21
Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = -3
Query:  402 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALV--RCMNPP 749
            SF GT EY+APE++   GHT + DWW+LG+L++EML G  PF+GK R +T   IL   L  P     SL A+ L+  L  R+P +RLG+  +G  EIK+H FF  ++W  +  R + PP
Sbjct:  226 SFCGTVEYMAPEVVNRRGHTQSADWWSLGVLMFEMLTGTLPFQGKDRNETMNMILKAKLGMPQF--LSLEAQGLLRMLFKRNPSNRLGAGPDGVEEIKRHTFFSTIDWNKLYRRELQPP 342          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6A5_CHICK (Ribosomal protein S6 kinase alpha-5 OS=Gallus gallus GN=RPS6KA5 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.989e-21
Identity = 61/160 (38.12%), Postives = 88/160 (55.00%), Query Frame = -3
Query:  342 FMAEPMRASNSFVGTEEYIAPEIIAGA--GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHA--KQLMYRLLHRDPKSRLG-SHEGANEIKKHPFFKGVNWALVRCMNPP---------ELDAPLFATDTEKEYKVVDP 779
            F+ +    + SF GT EY+AP+I+ G   GH  AVDWW++G+L+YE+L G +PF     + + A I  + LK     P  + A  K ++ RLL +DPK RLG     A+EIK+HPFF+ +NW  +     P         ELD   FA    +E+  +DP
Sbjct:  192 FLTDENERAYSFCGTIEYMAPDIVRGGDTGHDKAVDWWSVGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALSKDIIQRLLMKDPKKRLGCGPTDADEIKQHPFFQNINWDDLAAKKVPAPFKPVIRDELDVSNFA----EEFTEMDP 347          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6A2_MOUSE (Ribosomal protein S6 kinase alpha-2 OS=Mus musculus GN=Rps6ka2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.989e-21
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = -3
Query:  429 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNW 749
            SF GT EY+APE++   GHT + DWW+ G+L++EML G  PF+GK R++T A IL   L  P     S  A+ L+  L  R+P +RLG+  +G  EIK+HPFF  ++W
Sbjct:  218 SFCGTIEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMALILKAKLGMPQF--LSAEAQSLLRALFKRNPCNRLGAGVDGVEEIKRHPFFVTIDW 323          
The following BLAST results are available for this feature:
BLAST of CB290810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
Y0670_DICDI1.050e-2149.14Probable serine/threonine-protein kinase DDB_G0288... [more]
SCK2_SCHPO1.050e-2138.78Serine/threonine-protein kinase sck2 OS=Schizosacc... [more]
PKN1_RAT1.371e-2142.15Serine/threonine-protein kinase N1 OS=Rattus norve... [more]
SAX1_CAEEL2.339e-2142.37Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]
SGK2_RAT3.989e-2142.98Serine/threonine-protein kinase Sgk2 OS=Rattus nor... [more]
SGK2_MOUSE3.989e-2142.98Serine/threonine-protein kinase Sgk2 OS=Mus muscul... [more]
SGK2_HUMAN3.989e-2142.98Serine/threonine-protein kinase Sgk2 OS=Homo sapie... [more]
KS6A6_DANRE3.989e-2144.54Ribosomal protein S6 kinase alpha-6 OS=Danio rerio... [more]
KS6A5_CHICK3.989e-2138.13Ribosomal protein S6 kinase alpha-5 OS=Gallus gall... [more]
KS6A2_MOUSE3.989e-2146.30Ribosomal protein S6 kinase alpha-2 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290810 ID=CB290810; Name=CB290810; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTGAAGAAAGAGATAGAAAATGGATTAATTACCTATTAA
ATTAATAAAATACAAAACTTACAAAGTACCCACCCTTACAGATACAAACG
ATGCATACAAGTAATATATTACATACACAAGGCCTCCAAGATTATCTATC
GACGACAACTGCCGAGGTGAAAGCACAAGCAGAATCAATGAAACTGTTAT
TACTCGTCAAGTTGAGCTCCCCTTCCATAGCCTCTACTAAATGGGATGCA
CGTACCAACACAAATTTGCAGCAGACACTTCAAATAAAATAACAAAGAAT
TAGACTCCTCAGAAAACGTTTTGTTGCAGATCTTGCATTCCTGGATCCAC
AACTTTATACTCCTTCTCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCT
CAGGAGGGTTCATGCAACGAACTAGTGCCCAATTGACACCTTTGAAAAAT
GGATGCTTCTTTATTTCATTTGCTCCTTCATGCGAACCTAATCTGCTCTT
TGGATCTCTATGCAACAGGCGGTACATTAGCTGCTTTGCATGAAGACTTG
TCGGTGTACTTGACGGAAATTTGAGGTCTTTGTGGAGAATATTTGCAAAT
GTTTTTTGTCTTGTCTTGCCCCTGAATGGTGTGTATCCATAAAGCATTTC
ATACAGAAGAATTCCAAGAGCCCACCAGTCCACTGCACTTGTATGGCCTG
CACCGGCTATAATTTCCGGAGCTATATATTCTTCTGTGCCAACAAAAGAA
TTTGATGCTCGCATTGGTTCAGCCATGAAGACTGGATTCTGTTGGCCTTT
GTGGCGCCTTTTCTTTT
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