CB290810

Overview
NameCB290810
Unique NameCB290810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: ST38L_HUMAN (Serine/threonine-protein kinase 38-like OS=Homo sapiens GN=STK38L PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 5.210e-21
Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = -3
Query:  417 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 749
            S VGT +YIAPE+    G+    DWW+LG+++YEML GY PF  +T Q+T+  +++  + L FP   P S  AK L+ R    D ++R+G + G  EIK HPFF+GV+W  +R
Sbjct:  282 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-IDSENRIG-NSGVEEIKGHPFFEGVDWEHIR 392          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PK2_DICDI (Protein kinase 2 OS=Dictyostelium discoideum GN=pkgB PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.210e-21
Identity = 51/107 (47.66%), Postives = 69/107 (64.49%), Query Frame = -3
Query:  429 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 749
            +F GT EY+APE++ G GH  AVDWW+LG LLYEML G  PF  +     +  IL+ +LK P  T  S  AK L+  LL R+   RLG+ +G  E+K+HP+FK ++W
Sbjct:  309 TFCGTPEYLAPEVLNGHGHGCAVDWWSLGTLLYEMLTGLPPFYSQNVSTMYQKILNGELKIP--TYISPEAKSLLEGLLTREVDKRLGT-KGGGEVKQHPWFKNIDW 412          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6AA_CHICK (Ribosomal protein S6 kinase 2 alpha OS=Gallus gallus GN=RPS6KA PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.210e-21
Identity = 49/108 (45.37%), Postives = 70/108 (64.81%), Query Frame = -3
Query:  429 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNW 749
            SF GT EY+APE++   GH+ + DWW+ G+L++EML G  PF+GK R++T   IL   L  P     S  A+ L+  L  R+P +RLGS  +GA EIK+HPF+  ++W
Sbjct:  239 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF--LSAEAQSLLRALFKRNPANRLGSGPDGAEEIKRHPFYSTIDW 344          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6A5_HUMAN (Ribosomal protein S6 kinase alpha-5 OS=Homo sapiens GN=RPS6KA5 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.210e-21
Identity = 63/160 (39.38%), Postives = 89/160 (55.62%), Query Frame = -3
Query:  342 FMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLH--AKQLMYRLLHRDPKSRLG-SHEGANEIKKHPFFKGVNWALVRCMNPP---------ELDAPLFATDTEKEYKVVDP 779
            F+A+    + SF GT EY+AP+I+ G  +GH  AVDWW+LG+L+YE+L G +PF     + + A I  + LK     P  +   AK L+ RLL +DPK RLG     A+EIK+H FF+ +NW  +     P         ELD   FA    +E+  +DP
Sbjct:  202 FVADETERAYSFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNFA----EEFTEMDP 357          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: PKN3_MOUSE (Serine/threonine-protein kinase N3 OS=Mus musculus GN=Pkn3 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.804e-21
Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = -3
Query:  402 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNW--ALVRCMNPP 755
            +++F GT E++APE++    +T AVDWW LG+LLYEML G  PF G T ++ F  I+  D+  P     S+   +L+ +LL + P+ RLG+ E  A EIK  PFF+  NW   L R + PP
Sbjct:  705 TSTFCGTPEFLAPEVLTQEAYTRAVDWWGLGVLLYEMLVGECPFPGDTEEEVFECIVSADVPCPHF--LSVQGLELIQKLLQKSPEKRLGAGERDAEEIKVQPFFRTTNWQALLARTVQPP 823          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6A2_HUMAN (Ribosomal protein S6 kinase alpha-2 OS=Homo sapiens GN=RPS6KA2 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.887e-21
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = -3
Query:  429 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNW 749
            SF GT EY+APE++   GHT + DWW+ G+L++EML G  PF+GK R++T A IL   L  P     S  A+ L+  L  R+P +RLG+  +G  EIK+HPFF  ++W
Sbjct:  218 SFCGTIEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMALILKAKLGMPQF--LSGEAQSLLRALFKRNPCNRLGAGIDGVEEIKRHPFFVTIDW 323          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: CBK1_YARLI (Serine/threonine-protein kinase CBK1 OS=Yarrowia lipolytica GN=CBK1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.887e-21
Identity = 53/129 (41.09%), Postives = 78/129 (60.47%), Query Frame = -3
Query:  369 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 749
            S VGT +YIAPEI    G+    DWW+LG +++E L G+ PF  +  ++T+  I++  + L+FP     S  ++ L+ RLL    ++RLG   GANEIK HPFF+GV+W+ +R  N P +      TDT
Sbjct:  415 STVGTPDYIAPEIFVHQGYGQECDWWSLGAIMFECLVGWPPFCSEQPRETYHKIINWRETLQFPDDVHLSPESEDLIRRLL-TSSENRLGRIGGANEIKSHPFFRGVDWSSIREFNAPFVPKLSSITDT 542          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: AKT3_MOUSE (RAC-gamma serine/threonine-protein kinase OS=Mus musculus GN=Akt3 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.887e-21
Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = -3
Query:  369 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRL-GSHEGANEIKKHPFFKGVNWALV--RCMNPPELDAPLFATDT 749
            +F GT EY+APE++    +  AVDWW LG+++YEM+ G  PF  +  +K F  IL +D+KFP +   S  AK L+  LL +DP  RL G  + A EI +H FF GVNW  V  + + PP        TDT
Sbjct:  305 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRT--LSSDAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFSGVNWQDVYDKKLVPPFKPQVTSETDT 432          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: AKT3_HUMAN (RAC-gamma serine/threonine-protein kinase OS=Homo sapiens GN=AKT3 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.887e-21
Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = -3
Query:  369 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRL-GSHEGANEIKKHPFFKGVNWALV--RCMNPPELDAPLFATDT 749
            +F GT EY+APE++    +  AVDWW LG+++YEM+ G  PF  +  +K F  IL +D+KFP +   S  AK L+  LL +DP  RL G  + A EI +H FF GVNW  V  + + PP        TDT
Sbjct:  305 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRT--LSSDAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFSGVNWQDVYDKKLVPPFKPQVTSETDT 432          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: ST38L_MOUSE (Serine/threonine-protein kinase 38-like OS=Mus musculus GN=Stk38l PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.161e-20
Identity = 49/113 (43.36%), Postives = 71/113 (62.83%), Query Frame = -3
Query:  417 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANIL--HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 749
            S VGT +YIAPE+    G+    DWW+LG+++YEML G+ PF  +T Q+T+  ++   + L FP   P S  AK L+ R    D ++R+G + G  EIK HPFF+GV+W  +R
Sbjct:  282 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGFPPFCSETPQETYRKVMSWKETLAFPPEVPVSEKAKDLILRFC-TDSENRIG-NGGVEEIKGHPFFEGVDWGHIR 392          
The following BLAST results are available for this feature:
BLAST of CB290810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
ST38L_HUMAN5.210e-2144.25Serine/threonine-protein kinase 38-like OS=Homo sa... [more]
PK2_DICDI5.210e-2147.66Protein kinase 2 OS=Dictyostelium discoideum GN=pk... [more]
KS6AA_CHICK5.210e-2145.37Ribosomal protein S6 kinase 2 alpha OS=Gallus gall... [more]
KS6A5_HUMAN5.210e-2139.38Ribosomal protein S6 kinase alpha-5 OS=Homo sapien... [more]
PKN3_MOUSE6.804e-2142.98Serine/threonine-protein kinase N3 OS=Mus musculus... [more]
KS6A2_HUMAN8.887e-2146.30Ribosomal protein S6 kinase alpha-2 OS=Homo sapien... [more]
CBK1_YARLI8.887e-2141.09Serine/threonine-protein kinase CBK1 OS=Yarrowia l... [more]
AKT3_MOUSE8.887e-2143.08RAC-gamma serine/threonine-protein kinase OS=Mus m... [more]
AKT3_HUMAN8.887e-2143.08RAC-gamma serine/threonine-protein kinase OS=Homo ... [more]
ST38L_MOUSE1.161e-2043.36Serine/threonine-protein kinase 38-like OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290810 ID=CB290810; Name=CB290810; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTGAAGAAAGAGATAGAAAATGGATTAATTACCTATTAA
ATTAATAAAATACAAAACTTACAAAGTACCCACCCTTACAGATACAAACG
ATGCATACAAGTAATATATTACATACACAAGGCCTCCAAGATTATCTATC
GACGACAACTGCCGAGGTGAAAGCACAAGCAGAATCAATGAAACTGTTAT
TACTCGTCAAGTTGAGCTCCCCTTCCATAGCCTCTACTAAATGGGATGCA
CGTACCAACACAAATTTGCAGCAGACACTTCAAATAAAATAACAAAGAAT
TAGACTCCTCAGAAAACGTTTTGTTGCAGATCTTGCATTCCTGGATCCAC
AACTTTATACTCCTTCTCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCT
CAGGAGGGTTCATGCAACGAACTAGTGCCCAATTGACACCTTTGAAAAAT
GGATGCTTCTTTATTTCATTTGCTCCTTCATGCGAACCTAATCTGCTCTT
TGGATCTCTATGCAACAGGCGGTACATTAGCTGCTTTGCATGAAGACTTG
TCGGTGTACTTGACGGAAATTTGAGGTCTTTGTGGAGAATATTTGCAAAT
GTTTTTTGTCTTGTCTTGCCCCTGAATGGTGTGTATCCATAAAGCATTTC
ATACAGAAGAATTCCAAGAGCCCACCAGTCCACTGCACTTGTATGGCCTG
CACCGGCTATAATTTCCGGAGCTATATATTCTTCTGTGCCAACAAAAGAA
TTTGATGCTCGCATTGGTTCAGCCATGAAGACTGGATTCTGTTGGCCTTT
GTGGCGCCTTTTCTTTT
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