CB290810

Overview
NameCB290810
Unique NameCB290810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6A5_MOUSE (Ribosomal protein S6 kinase alpha-5 OS=Mus musculus GN=Rps6ka5 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20
Identity = 62/160 (38.75%), Postives = 87/160 (54.37%), Query Frame = -3
Query:  342 FMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLH--AKQLMYRLLHRDPKSRLG-SHEGANEIKKHPFFKGVNWALVRCMNPP---------ELDAPLFATDTEKEYKVVDP 779
            F+A+    + SF GT EY+AP+I+ G  +GH  AVDWW+LG+L+YE+L G +PF     + + A I  + LK     P  +   AK L+ RLL +DPK RLG     A EIK+H FF+ + W  +     P         ELD   FA    +E+  +DP
Sbjct:  201 FVADETERAYSFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSTVAKDLLQRLLMKDPKKRLGCGPRDAEEIKEHLFFEKIKWDDLAAKKVPAPFKPVIRDELDVSNFA----EEFTEMDP 356          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6A3_MOUSE (Ribosomal protein S6 kinase alpha-3 OS=Mus musculus GN=Rps6ka3 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20
Identity = 51/119 (42.86%), Postives = 74/119 (62.18%), Query Frame = -3
Query:  402 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALV--RCMNPP 749
            SF GT EY+APE++   GHT + DWW+ G+L++EML G  PF+GK R++T   IL   L  P     S  A+ L+  L  R+P +RLG+  +G  EIK+H FF  ++W  +  R ++PP
Sbjct:  227 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF--LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPP 343          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6A3_HUMAN (Ribosomal protein S6 kinase alpha-3 OS=Homo sapiens GN=RPS6KA3 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20
Identity = 51/119 (42.86%), Postives = 74/119 (62.18%), Query Frame = -3
Query:  402 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALV--RCMNPP 749
            SF GT EY+APE++   GHT + DWW+ G+L++EML G  PF+GK R++T   IL   L  P     S  A+ L+  L  R+P +RLG+  +G  EIK+H FF  ++W  +  R ++PP
Sbjct:  227 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF--LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPP 343          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KAPC_ASCSU (cAMP-dependent protein kinase catalytic subunit OS=Ascaris suum GN=CAPK PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20
Identity = 54/136 (39.71%), Postives = 80/136 (58.82%), Query Frame = -3
Query:  375 FMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPPELDAPLFAT 779
            F  E +  + +  GT EY+APE+I   GH +AVDWW+LG+L+YEM+ G  PFRGKT  + +  I+   L+F  S    L AK L+ +LL  D   RLG+  +GA ++  H +F  ++W  V+ M   +L  P+  T
Sbjct:  173 FAKEVIDRTWTMCGTPEYLAPEVIGNKGHDTAVDWWSLGVLIYEMMIGIPPFRGKTLDEIYEKIILGKLRFTRS--FDLFAKDLVKKLLQVDRTQRLGNQKDGAADVMNHKWFTDIDWDDVQNM---KLTPPIIPT 303          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6A1_HUMAN (Ribosomal protein S6 kinase alpha-1 OS=Homo sapiens GN=RPS6KA1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 54/130 (41.54%), Postives = 77/130 (59.23%), Query Frame = -3
Query:  369 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALV--RCMNPPELDAPLFATDT 749
            SF GT EY+APE++   GH+ + DWW+ G+L++EML G  PF+GK R++T   IL   L  P    T   A+ L+  L  R+P +RLGS  +GA EIK+H F+  ++W  +  R + PP   A     DT
Sbjct:  221 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLST--EAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPDDT 348          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KPC3_DROME (Protein kinase C OS=Drosophila melanogaster GN=Pkc98E PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 51/143 (35.66%), Postives = 80/143 (55.94%), Query Frame = -3
Query:  342 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMN-----PPELDAPLFATDTEKEYKVVDP 755
            + +F GT +YIAPEI+    + ++VDWWALG+L+YEM+ G  PF      + F +I+H D+ +P     S  A  ++   L ++P+ RLG     NEI+KHPFF  ++W  +   N      P++  P  A + + E+   DP
Sbjct:  459 TTTFCGTPDYIAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYP--VWLSREAVSILKGFLTKNPEQRLGCTGDENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAEFTKEDP 599          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: CBK1_DEBHA (Serine/threonine-protein kinase CBK1 OS=Debaryomyces hansenii GN=CBK1 PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 50/129 (38.76%), Postives = 79/129 (61.24%), Query Frame = -3
Query:  369 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILH--KDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAPLFATDT 749
            S VGT +YIAPEI    G+    DWW+LG +++E L G+ PF  +T  +T+  IL+  + L+ P     S  ++ L+ +LL  + ++RLG + GA+E+K HPFF+GV+W  +R ++ P +      TDT
Sbjct:  532 STVGTPDYIAPEIFVHQGYGQECDWWSLGAIMFECLIGWPPFCSETPHETYRKILNWQETLQIPDDIHLSPESEDLIRKLL-TNAENRLGRYNGADELKSHPFFRGVDWDTIRKVDAPFIPKLRSITDT 659          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: AKT3_RAT (RAC-gamma serine/threonine-protein kinase OS=Rattus norvegicus GN=Akt3 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 55/130 (42.31%), Postives = 75/130 (57.69%), Query Frame = -3
Query:  369 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRL-GSHEGANEIKKHPFFKGVNWALV--RCMNPPELDAPLFATDT 749
            +F GT EY+APE++    +  AVDWW LG+++YEM+ G  PF  +  +K F  IL +D+KFP +   S  AK L+  LL +DP  RL G  +   EI +H FF GVNW  V  + + PP        TDT
Sbjct:  305 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRT--LSSDAKSLLSGLLIKDPNKRLGGGPDDPKEIMRHSFFSGVNWQDVYDKKLVPPFKPQVTSETDT 432          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: Y2070_DICDI (Probable serine/threonine-protein kinase DDB_G0277449 OS=Dictyostelium discoideum GN=DDB_G0277449 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.410e-20
Identity = 51/107 (47.66%), Postives = 68/107 (63.55%), Query Frame = -3
Query:  429 SFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 749
            SF GT EY+APE+I  A    AVDWW++GIL+Y+M+ G  PF  K R      I+ +  KFP    +S  A+ L+  LL +DP  RLG++ GA EIK+HPFFK + W
Sbjct:  285 SFAGTLEYMAPEMIQHATCGKAVDWWSIGILMYDMMIGKPPFEHKNRALMQEKIISEKAKFPKFVSSS--ARSLINGLLTKDPTKRLGAN-GAIEIKRHPFFKSIQW 388          
BLAST of CB290810 vs. ExPASy Swiss-Prot
Match: KS6B2_MOUSE (Ribosomal protein S6 kinase beta-2 OS=Mus musculus GN=Rps6kb2 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.410e-20
Identity = 52/122 (42.62%), Postives = 75/122 (61.48%), Query Frame = -3
Query:  402 SNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEG-ANEIKKHPFFKGVNW--ALVRCMNPP 755
            +++F GT EY+APEI+   GH  AVDWW+LG L+Y+ML G  PF  + R+KT   I+   L  P   TP    A+ L  + L R+P  R+G   G A ++++HPFF+ +NW   L R ++PP
Sbjct:  226 THTFCGTIEYMAPEILVRTGHNRAVDWWSLGALMYDMLTGSPPFTAENRKKTMDKIIKGKLVLPPYLTP---DARDLAKKFLKRNPTQRIGGGLGDAADVQRHPFFRHINWDDLLARRVDPP 344          
The following BLAST results are available for this feature:
BLAST of CB290810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 342
Match NameE-valueIdentityDescription
KS6A5_MOUSE2.586e-2038.75Ribosomal protein S6 kinase alpha-5 OS=Mus musculu... [more]
KS6A3_MOUSE2.586e-2042.86Ribosomal protein S6 kinase alpha-3 OS=Mus musculu... [more]
KS6A3_HUMAN2.586e-2042.86Ribosomal protein S6 kinase alpha-3 OS=Homo sapien... [more]
KAPC_ASCSU2.586e-2039.71cAMP-dependent protein kinase catalytic subunit OS... [more]
KS6A1_HUMAN3.377e-2041.54Ribosomal protein S6 kinase alpha-1 OS=Homo sapien... [more]
KPC3_DROME3.377e-2035.66Protein kinase C OS=Drosophila melanogaster GN=Pkc... [more]
CBK1_DEBHA3.377e-2038.76Serine/threonine-protein kinase CBK1 OS=Debaryomyc... [more]
AKT3_RAT3.377e-2042.31RAC-gamma serine/threonine-protein kinase OS=Rattu... [more]
Y2070_DICDI4.410e-2047.66Probable serine/threonine-protein kinase DDB_G0277... [more]
KS6B2_MOUSE4.410e-2042.62Ribosomal protein S6 kinase beta-2 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01df10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290810 ID=CB290810; Name=CB290810; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTGAAGAAAGAGATAGAAAATGGATTAATTACCTATTAA
ATTAATAAAATACAAAACTTACAAAGTACCCACCCTTACAGATACAAACG
ATGCATACAAGTAATATATTACATACACAAGGCCTCCAAGATTATCTATC
GACGACAACTGCCGAGGTGAAAGCACAAGCAGAATCAATGAAACTGTTAT
TACTCGTCAAGTTGAGCTCCCCTTCCATAGCCTCTACTAAATGGGATGCA
CGTACCAACACAAATTTGCAGCAGACACTTCAAATAAAATAACAAAGAAT
TAGACTCCTCAGAAAACGTTTTGTTGCAGATCTTGCATTCCTGGATCCAC
AACTTTATACTCCTTCTCAGTATCGGTAGCGAAGAGAGGGGCATCCAGCT
CAGGAGGGTTCATGCAACGAACTAGTGCCCAATTGACACCTTTGAAAAAT
GGATGCTTCTTTATTTCATTTGCTCCTTCATGCGAACCTAATCTGCTCTT
TGGATCTCTATGCAACAGGCGGTACATTAGCTGCTTTGCATGAAGACTTG
TCGGTGTACTTGACGGAAATTTGAGGTCTTTGTGGAGAATATTTGCAAAT
GTTTTTTGTCTTGTCTTGCCCCTGAATGGTGTGTATCCATAAAGCATTTC
ATACAGAAGAATTCCAAGAGCCCACCAGTCCACTGCACTTGTATGGCCTG
CACCGGCTATAATTTCCGGAGCTATATATTCTTCTGTGCCAACAAAAGAA
TTTGATGCTCGCATTGGTTCAGCCATGAAGACTGGATTCTGTTGGCCTTT
GTGGCGCCTTTTCTTTT
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