CB290822

Overview
NameCB290822
Unique NameCB290822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4FE_MOUSE (Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus GN=Cyp4f14 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19
Identity = 53/156 (33.97%), Postives = 93/156 (59.62%), Query Frame = -1
Query:  359 LNWTMVLLSKHQDWQERARQEVLQVFGNNKPD---YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF-AEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNY 811
            L+W +  L++H ++QER RQEV ++    +P+   + +L  L  + M + E LRL+PP+T +SR   ++  L +  T+P G+   + +  +H +P +W D  V + P RF  E I  ++   +++ PF++GPR C+GQ FA+ E K+A A+ L  +
Sbjct:  337 LSWILYNLARHPEYQERCRQEVQELLRGREPEEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEV-YDPFRFDPENIKDSSP--LAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRF 489          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4AB_HUMAN (Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19
Identity = 56/184 (30.43%), Postives = 97/184 (52.72%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            ++W +  L+ H   QER R+E+  + G+     +  L+ +    M + E LRLYPP+  + R +       +  +LP G+ + L +  +H +P++W +  V F P RFA G   +A++  ++ PF+ G R C+G+ FA+ E K+A A+ L  +     P+ +  P A   L  + G  L LR+L
Sbjct:  330 ISWILYALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEV-FDPFRFAPG---SAQHSHAFLPFSGGSRNCIGKQFAMNELKVATALTLLRFELLPDPTRIPIPIARLVLKSKNGIHLRLRRL 509          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4AA_MOUSE (Cytochrome P450 4A10 OS=Mus musculus GN=Cyp4a10 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19
Identity = 58/184 (31.52%), Postives = 95/184 (51.63%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            ++W    L+ H D Q+R R+EV  + G+     +  L+ +    M + E LRLYPP+  + R +       +  +LP GVQ+ L +  +H +P++W +  V F P RFA     + ++  S+ PF+ G R C+G+ FA+ E K+  A+ L  +     P+ V  P A   L  + G  L L+KL
Sbjct:  329 VSWIFYALATHPDHQQRCREEVQSLLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGVQVTLSIYGLHHNPKVWPNPEV-FDPSRFAPD---SPRHSHSFLPFSGGARNCIGKQFAMSELKVIVALTLLRFELLPDPTRVPMPLARLVLKSKNGIYLHLKKL 508          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3AR_ONCMY (Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp3a27 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19
Identity = 50/140 (35.71%), Postives = 80/140 (57.14%), Query Frame = -1
Query:  347 RARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFEL 763
            + ++E+  VF N  P  Y  L  +  +  +L E LRLYP    L R   K  ++  + +P    + +P   +H+DPE+W D   EFKPERF++  +K + +  +Y PF +GPR C+G  FAL+  K+A   ILQ+++F +
Sbjct:  335 KLQEEIDTVFPNKAPIQYEALMQMDYLDCVLNESLRLYPIAPRLERVAKKTVEINGIVIPKDCIVLVPTWTLHRDPEIWSDPE-EFKPERFSKE-NKESIDPYTYMPFGAGPRNCIGMRFALIMIKLAMVEILQSFTFSV 472          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP3AI_RAT (Cytochrome P450 3A18 OS=Rattus norvegicus GN=Cyp3a18 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19
Identity = 49/155 (31.61%), Postives = 89/155 (57.42%), Query Frame = -1
Query:  350 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFE 811
            +++ M  L+   + Q++ + E+ +   N  P  Y  L  ++ + M++ E LRLYP  T L R   K+ ++  + +P G  + +P+  +H++PE W +   EF PERF++  +K + +   Y PF +GPR C+G  FAL+  K+A   +LQN++ +
Sbjct:  314 ISFIMYELATRPNVQKKLQNEIDRALPNKAPVTYDALMEMEYLDMVVNESLRLYPIATRLDRVSKKDVEINGVFIPKGTVVTIPIYPLHRNPEYWLEPE-EFNPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALISMKLAVIGVLQNFNIQ 466          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CYPE_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 2 OS=Bacillus subtilis GN=cypE PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.318e-19
Identity = 50/153 (32.68%), Postives = 88/153 (57.52%), Query Frame = -1
Query:  359 LLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNY 814
            LL++ +  L  H +  ++A++E  +V  ++ P+Y ++  LK ++M+L E LRLYP   A S    ++T L G   +  G  + + +  +H+D   WG DA +F+PERF +    ++    +Y PF +G R C+G  FAL EA M   ++L+++
Sbjct:  275 LLSFAIYCLLTHPEKLKKAQEEADRVLTDDTPEYKQIQQLKYIRMVLNETLRLYPTAPAFSLYAKEDTVLGGEYPISKGQPVTVLIPKLHRDQNAWGPDAEDFRPERFED---PSSIPHHAYKPFGNGQRACIGMQFALQEATMVLGLVLKHF 424          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4A5_RABIT (Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CYP4A5 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.318e-19
Identity = 57/184 (30.98%), Postives = 95/184 (51.63%), Query Frame = -1
Query:  266 LNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            ++W    L+ H + Q R R+E+  + G+     +  L+ +    M + E +RLYPP+ A+SR +       +  +LP G  + L +  +H +P +W +  V F P RF  G   +A++  ++ PF+ G R C+G+ FA+ E K+A A+ L  +     P+ +  PTA   L    G  L LRKL
Sbjct:  331 VSWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEAMRLYPPVPAISRDLSSPVTFPDGRSLPKGFTVTLSIYGLHHNPNVWPNPEV-FDPGRFTPG---SARHSHAFLPFSGGARNCIGKQFAMNELKVAVALTLVRFELLPDPTRIPKPTARLVLKSNNGIHLRLRKL 510          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: C97B2_SOYBN (Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-18
Identity = 66/217 (30.41%), Postives = 104/217 (47.93%), Query Frame = -1
Query:  257 LLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKL--------GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFA-----------EGISKAAK------NQV----SYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFEL--SPSYVHAPTAVPTLHPELGTQLILRKLWCK 814
            +L W + LL+++    ++A+ EV  V G  +P +  L  L+ +++I+ E LRLYP    L R  LK   L            +PAG  + + +  +H+ P  W D   +F+PERF             G+  +        N+V    ++ PF  GPR CVG  FAL+E+ +A  M+LQN+  EL  +P  V   T   T+H + G       +WC+
Sbjct:  361 VLTWAVFLLAQNPSKMKKAQAEVDLVLGTGRPTFESLKELQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGHKGEKDGYAIPAGTDVFISVYNLHRSPYFW-DRPDDFEPERFLVQNKNEEIEGWAGLDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGA-TIHTKNG-------MWCR 568          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: C4D10_DROMT (Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp4d10 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-18
Identity = 50/165 (30.30%), Postives = 88/165 (53.33%), Query Frame = -1
Query:  305 LSKHQDWQERARQEVLQVFGNNKPD---YGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSFELSPSYVHAPTAVPTL 790
            ++ + + Q +  +E++ V G +      Y  LN+L  + + + E LR+YP +  L R VL+E ++    +PAG  IG+  + + +  ++   +   FKPERF    S    N  +Y PF++GPR C+GQ FA++E K   A +L++Y  E   +   +P  +  L
Sbjct:  333 IALYPECQRKCVEEIVSVLGKDTETPVTYDLLNNLNYMDLCIKETLRMYPSVPLLGRKVLQECEINGKIIPAGTNIGISPLFLGRSEDI-SSEPNTFKPERFDVVTSAEKLNPHAYIPFSAGPRNCIGQKFAMLEIKAIAANVLRHYEIEFVGNAEESPVLIAEL 496          
BLAST of CB290822 vs. ExPASy Swiss-Prot
Match: CP4CU_BLAGE (Cytochrome P450 4c21 OS=Blattella germanica GN=CYP4C21 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18
Identity = 48/155 (30.97%), Postives = 87/155 (56.13%), Query Frame = -1
Query:  353 LNWTMVLLSKHQDWQERARQEVLQVF--GNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAPAMILQNYSF 811
            + W +  L  H + QE A +EV  +F   +  P   +LN++  ++ ++ E LRL+P +    R   ++ +LG  T+PAG  I   +  +H++PE++ +    F P+ F        ++  +Y PF++GPR C+GQ FAL+E K+  + +L++Y F
Sbjct:  318 MTWLLFELGHHPEIQEEAYKEVQDIFQGSDRVPTMADLNNMNYLERVIKESLRLHPSVIYFVREAHQDFELGGYTIPAGTNIDFSVPFIHRNPEIFPNPRC-FNPDNFLPD-RVVNRHPYAYIPFSAGPRNCIGQRFALLEEKVVLSYLLRHYRF 470          
The following BLAST results are available for this feature:
BLAST of CB290822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
CP4FE_MOUSE6.369e-1933.97Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus... [more]
CP4AB_HUMAN6.369e-1930.43Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE... [more]
CP4AA_MOUSE6.369e-1931.52Cytochrome P450 4A10 OS=Mus musculus GN=Cyp4a10 PE... [more]
CP3AR_ONCMY6.369e-1935.71Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp... [more]
CP3AI_RAT6.369e-1931.61Cytochrome P450 3A18 OS=Rattus norvegicus GN=Cyp3a... [more]
CYPE_BACSU8.318e-1932.68Probable bifunctional P-450/NADPH-P450 reductase 2... [more]
CP4A5_RABIT8.318e-1930.98Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CY... [more]
C97B2_SOYBN1.086e-1830.41Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=... [more]
C4D10_DROMT1.086e-1830.30Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp... [more]
CP4CU_BLAGE1.419e-1830.97Cytochrome P450 4c21 OS=Blattella germanica GN=CYP... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dg05_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dg05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290822 ID=CB290822; Name=CB290822; organism=Citrus sinensis; type=EST; length=814bp
TTTTTTTTTTTTTTTTTACCACAGCATTAATGCCCTTATTCTAATCATGG
CATTATAAAATTTTCCAATGGGGGCAAACATCTTTACTCTAAATAAAACT
AGAGTTGGGTTGAGCTCAATTTAAATATCTAAACAGCTCTTGTCTAAGCT
TTGAATCTCAATACAAATTTAAATACATTAAACTTCATTATAAAAGAGTC
TACATTGGCATCATGCTAATCTTATTGACAATATATAGTTGCCGGTATTA
ATTATTTTTGCACCATAGCTTCCGTAAAATCAATTGGGTACCCAGTTCCG
GATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGATGGAGACAAC
TCGAATGAGTAGTTTTGAAGAATCATTGCCGGGGCCATTTTTGCTTCTAC
TAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCGATGCGAATGGGA
AATATGAAACTTGATTTTTTGCCGCCTTTGAAATTCCTTCCGCAAACCTT
TCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAGGATCCTGGTG
AACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGTAATGTCAAGT
TTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCGCAGTTAAGGGC
GGATAAAGCCTGAGTACCTCGTAAAGTATCATCTGGACAATTTTGAGGTG
GTTCAATTCACCATAGTCGGGCTTATTATTGCCAAACACTTGCAAAACCT
CTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAATAAGACCATT
GTCCAATTAAGCAA
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