CB290892

Overview
NameCB290892
Unique NameCB290892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290892 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.768e-22
Identity = 67/192 (34.90%), Postives = 87/192 (45.31%), Query Frame = -2
Query:  421 GSVATMNMCSKCYKDIMLKQDQA------------KLAASSIGSIVNETSSSNGSESVAAAT------VDVQASSV-----------------------EPKIISVQPSCASELSESVEAK----PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 861
            G+  T  MCS CYK+ + +Q  +                S   S+    +S N  E  A +T      V V A  V                       EP +    PS +   +   E K    PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A   I K NPV+ AEK+ +I
Sbjct:   22 GNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of CB290892 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.768e-22
Identity = 56/152 (36.84%), Postives = 85/152 (55.92%), Query Frame = -2
Query:  430 GSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQ---PSCASELSESVEAKPK-----EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 861
            G+ AT N+C  C+           LAA         T+S++   S+++  +D Q       ++  Q   P    E++ ++   P         +RCS C+KRVGLTGF+CRCG+L+C  HRYSD+H C +DY++AARDAI + NPV++A K+
Sbjct:   30 GNPATQNLCQNCF-----------LAA---------TASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161          
BLAST of CB290892 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.768e-22
Identity = 56/152 (36.84%), Postives = 85/152 (55.92%), Query Frame = -2
Query:  430 GSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQ---PSCASELSESVEAKPK-----EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 861
            G+ AT N+C  C+           LAA         T+S++   S+++  +D Q       ++  Q   P    E++ ++   P         +RCS C+KRVGLTGF+CRCG+L+C  HRYSD+H C +DY++AARDAI + NPV++A K+
Sbjct:   30 GNPATQNLCQNCF-----------LAA---------TASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161          
BLAST of CB290892 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.938e-22
Identity = 54/153 (35.29%), Postives = 86/153 (56.21%), Query Frame = -2
Query:  424 GSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPK-------IISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 861
            GS + M++CSKCY+ I  ++ Q  +A +++        S   S   +    +  A  VEPK       ++S +PS +S + E+ E       +RC  C K+VG+ GFKC+CG+ +C  HRY + H+C FD++   R  I KANPV+KA+K+ +
Sbjct:   30 GSPSNMDLCSKCYRGICAEEAQTAVAKAAV------EKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPS-SSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQR 175          
BLAST of CB290892 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.146e-21
Identity = 68/203 (33.50%), Postives = 97/203 (47.78%), Query Frame = -2
Query:  421 GSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQ------------------------------------------PSCAS--------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 861
            G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A + +D  +SS++P  +S Q                                          PS  S        E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:   22 GNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPVQCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLVPLECDPPSSVSDTTQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of CB290892 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.146e-21
Identity = 68/203 (33.50%), Postives = 97/203 (47.78%), Query Frame = -2
Query:  421 GSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQ------------------------------------------PSCAS--------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 861
            G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A + +D  +SS++P  +S Q                                          PS  S        E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:   22 GNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPVQCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLVPLECDPPSSVSDTTQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of CB290892 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.334e-21
Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = -2
Query:  424 GSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEP--KIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 861
            GS  T NMCSKCY+D +        A S + S    +SSS  + S    TV +  ++  P   +   +    +  S S  A  K  P+RC +C+K+VGL GF+CRCG  +C +HR++DKH C FD++ + R+ I K NP+I A K+ K
Sbjct:   89 GSKETNNMCSKCYRDHLK-------ATSPLFS----SSSSPATASTTDITVPIAPATTAPTPSLKGKEEEATAAASSSAAAAAK--PNRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKITK 223          
BLAST of CB290892 vs. ExPASy Swiss-Prot
Match: SAP2_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Oryza sativa subsp. japonica GN=SAP2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.687e-21
Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = -2
Query:  421 GSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 861
            GS  T  +CSKCY+  ++ Q  A  AA+          S+   + V  A          P+ + V             AK K   SRC++C + VGL GF+CRCG ++C +HRYSD+H+C +DYR A RDAI +ANPV++ +K++K+
Sbjct:   24 GSADTRGLCSKCYRQTVMSQASAPSAAAQ---------SAEHDQVVLPA----------PEGVPVDEGAMPPPPPRHGAKTK---SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVEKL 148          
BLAST of CB290892 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18
Identity = 38/62 (61.29%), Postives = 50/62 (80.65%), Query Frame = -2
Query:  421 SRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 606
            +RC+ C+KRVGLTGF+CRCG L+C  HR+S+ H C FDY+TA R+ I +ANPVI+A K+ KI
Sbjct:  113 NRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKIIKI 174          
BLAST of CB290892 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.921e-17
Identity = 48/143 (33.57%), Postives = 72/143 (50.35%), Query Frame = -2
Query:  421 TMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 849
            T N+CSKCY D +  +    LA  ++        ++  +E V A          E  ++  +  CA                    CKK+VGL GF CRCG+L+  SHRY ++H+CP DY++AA D + K NPV+K +KL ++
Sbjct:   20 TKNLCSKCYNDFLKDESARYLATFNV--------NTKAAEEVTAQ---------EATVLGSKGGCA--------------------CKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVKGDKLFRL 125          
The following BLAST results are available for this feature:
BLAST of CB290892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ZFAN5_HUMAN1.768e-2234.90AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]
SAP1_ORYSJ1.768e-2236.84Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI1.768e-2236.84Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ARATH3.938e-2235.29Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_RAT1.146e-2133.50AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_MOUSE1.146e-2133.50AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]
SAP12_ORYSJ3.334e-2138.51Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ORYSJ5.687e-2137.41Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ2.023e-1861.29Zinc finger AN1 domain-containing stress-associate... [more]
SAP8_ARATH2.921e-1733.57Putative zinc finger A20 and AN1 domain-containing... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ac02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ac02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290892 ID=CB290892; Name=CB290892; organism=Citrus sinensis; type=EST; length=862bp
TTTTTGATACAAACCATAATTAAAAATTTACAGAGGCTAAGCGCAAGAAT
TGTCCATGTATGTTTTCCACATCATATGGAAATAGCACAACCATCTTTTT
CTGAATTTTTTTTTTTAAGCAGAAACTAATAAAGTGAAATGCCATATGAA
ACATAATGACAAATTGGAAAGCTATCCAAAAGTCCATAAAACCAGAGCAC
AGATTCACTCTTAAACACTGAAGCCAACATATAAGTTCTCGCCAACACAC
GACATAGAGTTCTTCATACTGCAGAGATGTCCTATAACTGATAATGGGCC
CCCAGCATATATAACATTAAAGGACACCTGATAAGATACGTGGCCTTCTC
AGAAGAAGCCTCTAACAGATGAGCAAGATCATCATTCTTTGATTATTGAA
ACCTCATCCCATTGAATCTAGATTTTATCTAGCTTCTCAGCCTTGATCAC
AGGGTTTGCTTTAATTATAGCATCCCTAGCAGCAGTGCGGTAGTCAAAGG
GGCAGTTATGTTTGTCCGAATAGCGATGTGACACACAGTATAAGTTACCA
CAGCGACATTTGAATCCTGTTAAACCAACACGCTTCTTGCAACTGCTGCA
CCGGCTGGGACCCTCCTTCGGCTTTGCCTCCACACTCTCGCTCAATTCTG
AAGCACATGATGGCTGCACAGAGATGATTTTTGGCTCCACTGAACTAGCT
TGCACATCAACAGTGGCAGCAGCAACAGATTCACTTCCATTGCTGCTTGA
CGTTTCATTCACAATGCTTCCAATAGATGAAGCAGCAAGCTTAGCTTGAT
CCTGTTTCAGCATTATATCCTTGTAGCATTTGGAACACATATTCATAGTA
GCCACACTTCCA
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