CB290900

Overview
NameCB290900
Unique NameCB290900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_PANTR (Translationally-controlled tumor protein OS=Pan troglodytes GN=TPT1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.944e-19
Identity = 59/174 (33.91%), Postives = 92/174 (52.87%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S              +  VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L    + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTV-ITGVDIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_HUMAN (Translationally-controlled tumor protein OS=Homo sapiens GN=TPT1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.944e-19
Identity = 59/174 (33.91%), Postives = 92/174 (52.87%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            M++Y+DL++ DE+ SD +  +EI +G+  EVEGK V +   ++D   IG N S              +  VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L    + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTV-ITGVDIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_ASPOR (Translationally-controlled tumor protein homolog OS=Aspergillus oryzae GN=AO090005000996 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.944e-19
Identity = 60/173 (34.68%), Postives = 89/173 (51.45%), Query Frame = -1
Query:  234 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFD----KKPFVTYMKRFI-KLLTPKLSEERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVK 734
            M++Y+D+LTGDE++SD+F  KE++N ILWEV+ + +  G  ++ + GANPS               +V+DI   FRL + P  +    KK    YMK+ + KL   K  EE  + FK+N + A K +L    D    VGES   D   +   Y+E    P   +    L+E K
Sbjct:    1 MIIYKDILTGDEIISDAFNLKEVDN-ILWEVDCRNITIGDENIQLEGANPSAEGEDDDAGGAGNAEQVLDIKHNFRLNDYPKLEKDEYKKAIKGYMKKVLAKLEEKKAPEETIKEFKENAQTALKRILANYKDYDVLVGESFGADAMHILINYREDGVTPYATFWKHGLEEYK 172          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_DROME (Translationally-controlled tumor protein homolog OS=Drosophila melanogaster GN=Tctp PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.038e-18
Identity = 60/175 (34.29%), Postives = 98/175 (56.00%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKE--GATDPTFLYMADALKEVKC 734
            M +Y+D++TGDE+ +D++  K +++ +++EV GK + +   D+ + GAN S            +    VD+V   RL E  AF DKK +  Y+K ++K +  KL E   ++ +IFK N+  A K +L +  +LQFF GESM  DG +    Y+E  G + P  ++    L+E KC
Sbjct:    1 MKIYKDIITGDEMFADTYKMKLVDD-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSE--SGVDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLEEEKC 172          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_BOVIN (Translationally-controlled tumor protein OS=Bos taurus GN=TPT1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.038e-18
Identity = 58/174 (33.33%), Postives = 92/174 (52.87%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            M++Y+DL++ DE+ SD +  +E+ +G+  EVEGK V +   ++D   IG N S              +  VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L    + QFF+GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTV-ITGVDIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_BOMMO (Translationally-controlled tumor protein homolog OS=Bombyx mori GN=Tctp PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.770e-18
Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -1
Query:  234 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 734
            M +Y+D++TGDE+ SD++  K ++  +++EV G+ V +   D+ I G NPS            +    VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ E+FK N+    K +L +  +LQFF GESM  DG +    Y+  +G   P  ++    L+E K
Sbjct:    1 MKIYKDIITGDEMFSDTYKMKLVDE-VIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDSAVE--SGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 171          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_RABIT (Translationally-controlled tumor protein OS=Oryctolagus cuniculus GN=TPT1 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.311e-18
Identity = 58/174 (33.33%), Postives = 91/174 (52.30%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            M++Y+DL++ DE+ SD +  +EI  G+  EVEGK V +   ++D   IG N S              +  VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L    + QF++GE+M+ DG +    Y+E    P  ++  D L+  KC
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIAGGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTV-ITGVDIVMNHHLQET-SFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFYIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_DEBHA (Translationally-controlled tumor protein homolog OS=Debaryomyces hansenii GN=DEHA2E17468g PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.311e-18
Identity = 57/157 (36.31%), Postives = 89/157 (56.69%), Query Frame = -1
Query:  273 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDP 734
            M+++ D+++GDELLSD++  K +++ +++E +   V     DVDIGANPS            + V   ++V +FRLQ Q +FDKK F+TYMK ++K +   L+E+  E  +    GA    K ++    D  F+ GESM  DG +V   Y+E  T P
Sbjct:    1 MIIFTDVISGDELLSDAYDVKLVDD-VVYEADCAMVNVNNGDVDIGANPSAEEGGEDLEDGTETVN--NVVYSFRLQ-QTSFDKKSFMTYMKGYMKRVKAHLAEKNPEAIEAFENGAKTYFKKVVSSFGDWDFYTGESMDPDGMVVLLNYREDGTTP 153          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_XENTR (Translationally-controlled tumor protein homolog OS=Xenopus tropicalis GN=tpt1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.943e-18
Identity = 56/173 (32.37%), Postives = 87/173 (50.29%), Query Frame = -1
Query:  231 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 734
            M++Y+D +T DE+ SD +   E  +G+ +EVEGK +  V+GA+D  +    +              V  VDIV   +LQE   F K  +  Y+K ++KL+  KL E   +R + F K I+   K +L    + QF+ GE M+ DG +    Y+E    P  ++  D L   KC
Sbjct:    1 MIIYKDTVTEDEMFSDIYKIAETPDGMCFEVEGKIIQRVEGAIDDALIGGNASAECQEEDIGGATTVSGVDIVINHKLQET-GFTKDSYKNYIKDYVKLVKAKLEETDPDRVKPFMKGIQDRVKLILGNFKNYQFYTGERMNPDGMVALLDYREDGVTPFMIFFKDGLISEKC 172          
BLAST of CB290900 vs. ExPASy Swiss-Prot
Match: TCTP_LONON (Translationally-controlled tumor protein homolog OS=Lonomia obliqua GN=Tctp PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.147e-17
Identity = 62/175 (35.43%), Postives = 94/175 (53.71%), Query Frame = -1
Query:  234 MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXDQPVKVVDIVDTFRLQEQPAF-DKKPFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLLKLSDLQFFVGESMHDDGCLVFAYYK--EGATDPTFLYMADALKEVK 734
            M +Y+D++TGDE+ SD++  K ++  +++EV GK V   QG + +D G NPS            +    VDIV   RL E  AF DKK +  Y+K ++K L  KL E   ++ +IFK N+    K +L +  +LQFF GESM  DG +    Y+  +    P  ++    L+E K
Sbjct:    1 MRIYKDIITGDEMFSDTYKVKLVDE-VIYEVTGKLVSRTQGDIQID-GFNPSAEEADEGTDSNVETG--VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFKELQFFTGESMDCDGMVAMMEYRKVDETEIPIMMFFKHGLEEEK 171          
The following BLAST results are available for this feature:
BLAST of CB290900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
TCTP_PANTR7.944e-1933.91Translationally-controlled tumor protein OS=Pan tr... [more]
TCTP_HUMAN7.944e-1933.91Translationally-controlled tumor protein OS=Homo s... [more]
TCTP_ASPOR7.944e-1934.68Translationally-controlled tumor protein homolog O... [more]
TCTP_DROME1.038e-1834.29Translationally-controlled tumor protein homolog O... [more]
TCTP_BOVIN1.038e-1833.33Translationally-controlled tumor protein OS=Bos ta... [more]
TCTP_BOMMO1.770e-1835.06Translationally-controlled tumor protein homolog O... [more]
TCTP_RABIT2.311e-1833.33Translationally-controlled tumor protein OS=Orycto... [more]
TCTP_DEBHA2.311e-1836.31Translationally-controlled tumor protein homolog O... [more]
TCTP_XENTR3.943e-1832.37Translationally-controlled tumor protein homolog O... [more]
TCTP_LONON1.147e-1735.43Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ac06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ac06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290900 ID=CB290900; Name=CB290900; organism=Citrus sinensis; type=EST; length=794bp
TTTTTTTTTTTTTTTTTAACAAAAACTATTAAGTTATTTGGGCCCTTTAT
CTCAAACCATAAAACCCAATAATTAAGAGCAGAACCACTTATTGTTTATG
TCAAAATAAAAACTAAAAAACAGCAAGCACAAGTCCCGAGTAAACCAGCA
CAAAAGATACATAAAAATAACCGCGGGCAATAATTAAAATTAGAACTACG
GCAGGCACTTCCTCTTCGAAGCCCAGCTTAGCACTTCACCTCCTTCAATG
CATCAGCCATATACAAAAATGTTGGGTCGGTCGCACCTTCCTTGTAGTAA
GCAAAGACAAGACAGCCATCATCATGCATGCTCTCCCCAACAAAGAATTG
AAGGTCACTGAGCTTCAAAAGCAAGAACTTGGTCGCTCCCTCAATATTCT
TCTTAAATATCTCCTGCCTCTCCTCACTCAGCTTGGGCGTCAGCAACTTG
ATGAATCTCTTCATGTATGTTACAAACGGCTTCTTGTCAAAAGCGGGTTG
CTCCTGTAGCCTGAATGTGTCGACAATGTCAACCACCTTCACGGGTTGGT
CATCAACACCCTCATCCTCATCAGCTCCTTCGGCAGAAGGATTTGCACCA
ATGTCAACATCAACGGCTCCTTGTACAACCCACTTTCCCTCAACTTCCCA
CAGAATCCCATTCTCAATTTCCTTGTAGGGAAAAGAATCGGAGAGAAGCT
CATCACCGGTGAGGAGATCTTGATAGACCAACATGATTGCAGTCTCTCTC
GCGAACACAAAAAAGAAAAATAATCAACGGAGAAAACTGGAGAG
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