CB290902

Overview
NameCB290902
Unique NameCB290902
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: LGMN_RAT (Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.286e-50
Identity = 89/146 (60.96%), Postives = 112/146 (76.71%), Query Frame = 3
Query:  102 GGGGAKVN-DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMP 533
            G G   +  DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA NEENP PGV+IN P+G DVYKGVPKDYTGEDVT ENF AV+ G++ A+ G GSGKV+ SGP DH+F++++DHG  G+L  P
Sbjct:   14 GAGAVHIGVDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANNEENPTPGVVINRPNGTDVYKGVPKDYTGEDVTPENFLAVLRGDEEAVKGKGSGKVLKSGPRDHVFVYFTDHGATGILVFP 159          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: LGMN_HUMAN (Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.844e-49
Identity = 85/144 (59.03%), Postives = 112/144 (77.78%), Query Frame = 3
Query:  105 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMP 533
            G GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+FI+++DHG  G+L  P
Sbjct:   14 GIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFIYFTDHGSTGILVFP 157          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: LGMN_MACFA (Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.633e-49
Identity = 84/144 (58.33%), Postives = 112/144 (77.78%), Query Frame = 3
Query:  105 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMP 533
            G GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++++DHG  G+L  P
Sbjct:   14 GIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFVYFTDHGSTGILVFP 157          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: LGMN_MOUSE (Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.221e-48
Identity = 89/148 (60.14%), Postives = 111/148 (75.00%), Query Frame = 3
Query:  102 GGGGAKVN-DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTN 539
            G G   V  DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA +EENP PGV+IN P+G DVYKGV KDYTGEDVT ENF AV+ G+  A+ G GSGKV+ SGP DH+FI+++DHG  G+L  P +
Sbjct:   14 GAGAVPVGVDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANSEENPTPGVVINRPNGTDVYKGVLKDYTGEDVTPENFLAVLRGDAEAVKGKGSGKVLKSGPRDHVFIYFTDHGATGILVFPND 161          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: LGMN_PONAB (Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.788e-48
Identity = 85/156 (54.49%), Postives = 118/156 (75.64%), Query Frame = 3
Query:  111 GAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVL 575
            GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++ +DHG  G+L  P N  ++ ++L + +
Sbjct:   16 GAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFVYSTDHGSTGILVFP-NEDLHVEDLNETI 170          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: LGMN_BOVIN (Legumain OS=Bos taurus GN=LGMN PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.330e-47
Identity = 83/144 (57.64%), Postives = 110/144 (76.39%), Query Frame = 3
Query:  105 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMP 533
            G GA   +D +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA +E+NP PG++IN P+G DVY+GV KDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++++DHG  G+L  P
Sbjct:   14 GTGAVPLEDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIVHRNGIPDEQIIVMMYDDIANSEDNPTPGIVINRPNGSDVYQGVLKDYTGEDVTPKNFLAVLRGDAEAVKGVGSGKVLKSGPRDHVFVYFTDHGATGILVFP 157          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: HGLB_SCHMA (Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 1.493e-36
Identity = 74/154 (48.05%), Postives = 105/154 (68.18%), Query Frame = 3
Query:  117 KVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQ 578
            +V+D+  S   +WAVL+AGSNG+ NYRHQAD+CHAY +LR  G+K E+II  MYDDIA+N  NP PG + N  +  D Y+GV  DY G++V  + F  V+ G+K+A     GKV+ SG ND +FI+++DHG PG++  P +  +YA E +  L+
Sbjct:   26 EVSDETVSDNNKWAVLVAGSNGYPNYRHQADVCHAYHVLRSKGIKPEHIITMMYDDIAYNLMNPFPGKLFNDYNHKDWYEGVVIDYRGKNVNSKTFLKVLKGDKSA----GGKVLKSGKNDDVFIYFTDHGAPGLIAFPDD-ELYAKEFMSTLK 174          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: HGLB_SCHJA (Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.326e-36
Identity = 75/143 (52.45%), Postives = 97/143 (67.83%), Query Frame = 3
Query:  150 RWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQ 578
            +WAVL+AGSNGF NYRHQAD+CHAY +L   G+K E+II FMYDDIA N+ENP PG I N     D YKGV  DY G+ V  + F  V+ G+K A     GKV+ SG ND +FI+++DHG PG+L  P +  ++A   I+ L+
Sbjct:   31 KWAVLVAGSNGFENYRHQADVCHAYHVLLSKGVKPEHIITFMYDDIAHNKENPFPGKIFNDYRHKDYYKGVVIDYKGKKVNPKTFLQVLKGDKRA----GGKVLKSGKNDDVFIYFTDHGAPGILAFPDD-DLHAKPFINTLK 168          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: GPI8_DROME (Putative GPI-anchor transamidase OS=Drosophila melanogaster GN=CG4406 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.075e-18
Identity = 56/150 (37.33%), Postives = 85/150 (56.67%), Query Frame = 3
Query:  153 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVV-DSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQK 581
            WAVL+  S  ++NYRH A++   Y+ +++ G+ D  II+ + DD+A N  NPRPG + N+       +GDD    V  DY G +VTVENF  ++ G     T  S K++ D+G N  + I+ + HGG G L    +  I + EL D +Q+
Sbjct:   47 WAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNARNPRPGQVYNNANQHINVYGDD----VEVDYRGYEVTVENFVRLLTGRTQNGTARSKKLLSDAGSN--VLIYLTGHGGDGFLKFQDSEEITSQELADGIQQ 190          
BLAST of CB290902 vs. ExPASy Swiss-Prot
Match: GPI8_MOUSE (GPI-anchor transamidase OS=Mus musculus GN=Pigk PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.314e-16
Identity = 63/197 (31.98%), Postives = 97/197 (49.24%), Query Frame = 3
Query:    9 LVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTNLYIYADELIDVLQK 581
            L ALA ++ GS   AG I     +A +FF +G                WAVL+  S  ++NYRH A+    Y+ +++ G+ D +I++ + DD+A N  NP+P  + +H       +GDD    V  DY   +VTVENF  V+ G     T  S +++ S    +I I+ + HGG G L    +  I   EL D  ++
Sbjct:   14 LAALALLSLGS-SAAGHI---EDQAEQFFRSGHTN------------NWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNARNPKPATVFSHKNMELNVYGDD----VEVDYRSYEVTVENFLRVLTGRVPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQ 189          
The following BLAST results are available for this feature:
BLAST of CB290902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
LGMN_RAT5.286e-5060.96Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1[more]
LGMN_HUMAN5.844e-4959.03Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1[more]
LGMN_MACFA7.633e-4958.33Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1[more]
LGMN_MOUSE2.221e-4860.14Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1[more]
LGMN_PONAB3.788e-4854.49Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1[more]
LGMN_BOVIN9.330e-4757.64Legumain OS=Bos taurus GN=LGMN PE=1 SV=1[more]
HGLB_SCHMA1.493e-3648.05Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3[more]
HGLB_SCHJA3.326e-3652.45Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=... [more]
GPI8_DROME1.075e-1837.33Putative GPI-anchor transamidase OS=Drosophila mel... [more]
GPI8_MOUSE1.314e-1631.98GPI-anchor transamidase OS=Mus musculus GN=Pigk PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ac07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ac07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290902 ID=CB290902; Name=CB290902; organism=Citrus sinensis; type=EST; length=604bp
GCACGCTCCTAGTCGCTCTTGCAGGAATCGCCGATGGAAGCAGAGACATA
GCAGGTGACATTCTGAAGCTACCATCGGAAGCCTATAGGTTCTTCCATAA
TGGTGGGGGAGGGGCAAAGGTCAACGATGATGATGATTCTGTCGGCACGA
GATGGGCCGTCCTGCTTGCCGGATCTAATGGCTTCTGGAATTACAGGCAT
CAGGCTGATATTTGTCATGCTTATCAACTCTTGAGGAAAGGTGGGCTGAA
GGATGAAAATATTATTGTTTTCATGTATGATGACATCGCTTTCAATGAAG
AGAACCCAAGGCCTGGAGTCATCATTAACCACCCCCATGGCGATGATGTT
TACAAAGGAGTTCCAAAGGATTACACGGGGGAAGATGTTACTGTTGAAAA
CTTTTTTGCTGTTATCCTGGGAAATAAAACAGCTCTTACAGGGGGCAGTG
GGAAGGTTGTGGATAGCGGCCCCAATGATCATATTTTCATATTCTACTCA
GATCATGGTGGCCCTGGGGTGCTAGGGATGCCCACCAATCTATACATATA
TGCTGATGAACTGATCGATGTCTTACAAAAGAAGCCTGCTTCTGGGAACT
ACAA
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