CB290908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_BUCAT (Ribose-5-phosphate isomerase A OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=rpiA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.918e-18 Identity = 63/186 (33.87%), Postives = 100/186 (53.76%), Query Frame = 2 Query: 218 LKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVG-IPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEG---ENGKPYITDNFNYIIDLY 763 LKK AA A+DY+ G +G+GTG+T + ++ +G + I G + +S + K I + L + SL + +D ADE++ + ++KG GGAL REK++ + SK FV + D+SK V LG +P+E++ Y +F+E+ +K G + K ITDN N IID+Y Sbjct: 6 LKKKAAWAALDYIDPGTIIGVGTGTTIFYFIEALGTIKNL-----IYGAVSSSNSSTVLLKKHGIEVFDLKNFSSLAIYVDSADEINNHMQMIKGGGGALTREKIIASMSKKFVCIIDKSKKVDVLG--TFPLPIEIIPMALSY-------IFREM-----IKIGGTPKYRKNVITDNGNIIIDVY 172
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_BUCAI (Ribose-5-phosphate isomerase A OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpiA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.918e-18 Identity = 63/186 (33.87%), Postives = 100/186 (53.76%), Query Frame = 2 Query: 218 LKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVG-IPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEG---ENGKPYITDNFNYIIDLY 763 LKK AA A+DY+ G +G+GTG+T + ++ +G + I G + +S + K I + L + SL + +D ADE++ + ++KG GGAL REK++ + SK FV + D+SK V LG +P+E++ Y +F+E+ +K G + K ITDN N IID+Y Sbjct: 6 LKKKAAWAALDYIDPGTIIGVGTGTTIFYFIEALGTIKNL-----IYGAVSSSNSSTVLLKKHGIEVFDLKNFSSLAIYVDSADEINNHMQMIKGGGGALTREKIIASMSKKFVCIIDKSKKVDVLG--TFPLPIEIIPMALSY-------IFREM-----IKIGGTPKYRKNVITDNGNIIIDVY 172
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_BUCA5 (Ribose-5-phosphate isomerase A OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=rpiA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.918e-18 Identity = 63/186 (33.87%), Postives = 100/186 (53.76%), Query Frame = 2 Query: 218 LKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVG-IPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEG---ENGKPYITDNFNYIIDLY 763 LKK AA A+DY+ G +G+GTG+T + ++ +G + I G + +S + K I + L + SL + +D ADE++ + ++KG GGAL REK++ + SK FV + D+SK V LG +P+E++ Y +F+E+ +K G + K ITDN N IID+Y Sbjct: 6 LKKKAAWAALDYIDPGTIIGVGTGTTIFYFIEALGTIKNL-----IYGAVSSSNSSTVLLKKHGIEVFDLKNFSSLAIYVDSADEINNHMQMIKGGGGALTREKIIASMSKKFVCIIDKSKKVDVLG--TFPLPIEIIPMALSY-------IFREM-----IKIGGTPKYRKNVITDNGNIIIDVY 172
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_POLSQ (Ribose-5-phosphate isomerase A OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=rpiA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.470e-17 Identity = 63/199 (31.66%), Postives = 104/199 (52.26%), Query Frame = 2 Query: 203 LTQDDLKKLAADKAVDYV---KSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVG-IPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGEN---------GKPYITDNFNYIIDL 760 + QD LKK+ D A D V +G LG+GTGST +D + G + +S T E+ + +D SL +DGADE+DP+ +++KG GGAL REK++ + ++ F+ + D SK V LG A+PVE++ V ++L ++LG + L+ ++ +P++TDN +I+D+ Sbjct: 1 MNQDQLKKMVGDAARDEVLKLPAGQILGVGTGSTANCFIDALAP-----HKDHFAGTVSSSNATTERLLKHGFKVLDPNDVVSLPAYVDGADEIDPQGHMIKGGGGALTREKIIASMAQQFICICDSSKQVPVLG--NFALPVEIIPLA---KGVVTREL-EKLGGKVTLRLAKSTRADLNQTPSEPFVTDNGGWILDI 188
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_DICNV (Ribose-5-phosphate isomerase A OS=Dichelobacter nodosus (strain VCS1703A) GN=rpiA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16 Identity = 56/187 (29.95%), Postives = 100/187 (53.48%), Query Frame = 2 Query: 203 LTQDDLKKLAADKAVDYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGENGKPYITDNFNYIIDLY 763 + Q LK+ A +++V + LG+G+GST ++ + Q + + RDIV + +A + D P D+ +DGADE++ + ++KG G AL REK++ +A+K F+ + DESK V+ LG + + VEV+ Y + +LG E + ++G +TDN ++I+D++ Sbjct: 1 MNQQLLKEKVAAAVLEHVPENITLGVGSGSTVLCFIEALKQAKR--QFRDIVAASETSSKALEAAGFRVRDLNACDPP--DIYVDGADEINDDKIMIKGGGAALTREKIIASAAKEFICIIDESKKVAQLG--RFPVAVEVIPMARSY----VAREIVKLGAEPRWRQG-----VVTDNGHWILDVH 172
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_POLNS (Ribose-5-phosphate isomerase A OS=Polynucleobacter necessarius (strain STIR1) GN=rpiA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.084e-16 Identity = 59/198 (29.80%), Postives = 99/198 (50.00%), Query Frame = 2 Query: 203 LTQDDLKKLAADKAVDYV---KSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGEN---------GKPYITDNFNYIIDL 760 + QD LK++ + A D V +G LG+GTGST + +D + L G V +S T E+ + +D L +DGADE+DP +++KG GG L EK++ + +K F+ + D SK V LG A+PVE++ +V + ++ G L+ ++ +P++TDN +I+D+ Sbjct: 1 MNQDQLKQMVGEAARDEVLKLPAGQVLGVGTGSTANYFIDALA--LHKGHFAGTVS--SSNATTERLLKHGFKVLDPNDVQGLPAYVDGADEIDPAGHMIKGGGGVLTGEKIIASMAKQFICICDSSKQVPVLG--NFALPVEIIPL--SQGVVSRE--LEKFGGRVTLRLAKHTRADLNQTPSEPFVTDNGGWILDV 188
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_HALSA (Ribose-5-phosphate isomerase A OS=Halobacterium salinarium GN=rpiA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.945e-16 Identity = 66/181 (36.46%), Postives = 97/181 (53.59%), Query Frame = 2 Query: 221 KKLAADKAV-DYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGE-NGKPYITDNFNYIID 757 K+ A + AV + V G +GLGTGST A + +G E D+ G+ TS + +A + +T+L+ S+D+AIDGAD+V + LVKG G A REK V A++ FVVVAD SK + + +PV VV W + D + LG A L++ E P +TD + ++D Sbjct: 11 KRRAGEAAVAEEVTEGAVVGLGTGSTVAHAIRALG-----AEASDVSGVATSFESRRRAVDAGVTVTSLEA-ASVDVAIDGADQVADGV-LVKGGGAAHTREKYVAASADRFVVVADPSKESDVV---DVPVPVAVVPDAWPV----VVDRVEALGGTATLRDAERKDGPVVTDTGSLVVD 177
BLAST of CB290908 vs. ExPASy Swiss-Prot
Match: RPIA_HALS3 (Ribose-5-phosphate isomerase A OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpiA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.945e-16 Identity = 66/181 (36.46%), Postives = 97/181 (53.59%), Query Frame = 2 Query: 221 KKLAADKAV-DYVKSGMALGLGTGSTGAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFKELGCEAKLKEGE-NGKPYITDNFNYIID 757 K+ A + AV + V G +GLGTGST A + +G E D+ G+ TS + +A + +T+L+ S+D+AIDGAD+V + LVKG G A REK V A++ FVVVAD SK + + +PV VV W + D + LG A L++ E P +TD + ++D Sbjct: 11 KRRAGEAAVAEEVTEGAVVGLGTGSTVAHAIRALG-----AEASDVSGVATSFESRRRAVDAGVTVTSLEA-ASVDVAIDGADQVADGV-LVKGGGAAHTREKYVAASADRFVVVADPSKESDVV---DVPVPVAVVPDAWPV----VVDRVEALGGTATLRDAERKDGPVVTDTGSLVVD 177 The following BLAST results are available for this feature:
BLAST of CB290908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 458
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290908 ID=CB290908; Name=CB290908; organism=Citrus sinensis; type=EST; length=780bpback to top |