CB290909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.806e-28 Identity = 59/118 (50.00%), Postives = 81/118 (68.64%), Query Frame = -2 Query: 123 YMALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 476 Y A+ V+ +CMV+ PIAQA +TCGQV+S+L C+PYV CC+GI+++N+ A TTPDRQ+ CNCLK + S+ +N N A+ LP +CGVNIPYQISPS +C+ V+ Sbjct: 3 YSAMTKLALVVALCMVVSVPIAQA-ITCGQVSSNLAPCIPYVRGGGAVPPA--CCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.689e-27 Identity = 62/117 (52.99%), Postives = 82/117 (70.09%), Query Frame = -2 Query: 123 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 473 MA+ + CA + CMV+GAP +A ++CGQV+SSL C+ Y+T CCSG+KSLNSAA TTPDRQ+ C CLK+A SI +N A+ P +CGV+IPY+ISPS DCS+V+ Sbjct: 4 MAMMVLCAGVT-CMVVGAPYTEA-LSCGQVSSSLAPCISYLTKGGAVPPA--CCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.882e-27 Identity = 62/118 (52.54%), Postives = 77/118 (65.25%), Query Frame = -2 Query: 123 LKLACAVLLMC-MVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSI--RNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 467 LKL C V +MC M +G P A AAV+CGQV ++L C+ YV CC+G++SL S A TT DRQS+CNCLK A I N N LA+GLP +CGVNIPY+ISPS DC ++ Sbjct: 8 LKLVCLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPS--CCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = -2 Query: 126 RTLYMALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 485 R++ +A+ +A +V+ A ++AAVTCGQV+S++ C+ Y CCSG++SLNSAA TT DR++ CNCLK AA IR LN+ A+ +P +CGV+IPY IS S DCSRV Sbjct: 3 RSMKLAVAIAVVAAAAAVVLAATTSEAAVTCGQVSSAIGPCLSYARGQGSGPSAG-CCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.186e-26 Identity = 60/117 (51.28%), Postives = 81/117 (69.23%), Query Frame = -2 Query: 123 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 473 M K+AC VLL CMV+ AP A+A +TCGQVT+ L C+PY+ CC G+K+L +A TT DR++ C CLK+AA +I+ ++LN A+G+P C VNIPY+ISPS DCS V+ Sbjct: 3 MVSKIACFVLL-CMVVVAPHAEA-LTCGQVTAGLAPCLPYLQGRGPLGG---CCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.161e-26 Identity = 60/117 (51.28%), Postives = 80/117 (68.38%), Query Frame = -2 Query: 123 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 473 M K+AC VLL CMV+ AP A+A +TCGQVT+ L C+PY+ CC G+K L +A TT DR++ C CLK+AA +I+ ++LN A+G+P C VNIPY+ISPS DCS V+ Sbjct: 3 MVSKIACFVLL-CMVVVAPHAEA-LTCGQVTAGLAPCLPYLQGRGPLGG---CCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.097e-26 Identity = 62/117 (52.99%), Postives = 77/117 (65.81%), Query Frame = -2 Query: 123 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 473 M K+AC VLL CMV+ AP A+A +TCGQVTS+L C+PY+ CC G+K L A TT DRQ+ C CLK+AA S L+L A+ LP C VNIPY+ISPS DCS+V+ Sbjct: 3 MVNKIACFVLL-CMVVVAPHAEA-LTCGQVTSTLAPCLPYLMNRGPLGG---CCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.270e-26 Identity = 57/117 (48.72%), Postives = 78/117 (66.67%), Query Frame = -2 Query: 123 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 473 M+LKLAC V+L C+++ AP+AQ A++ QV SSL C+ YV C GI+SL SAA DRQ+ C C+K+ A I ++N +A+GLP QC V+IPY+ISPS+DC RV+ Sbjct: 5 MSLKLACVVVL-CLLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.270e-26 Identity = 62/117 (52.99%), Postives = 78/117 (66.67%), Query Frame = -2 Query: 123 MALKLACAVLLMCMVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 473 M K+AC VLL CMV+ AP A+A +TCGQVTS+L C+PY+ CC G+K L A TT DRQ+ C CLK+AA S +L+L A+ LP C VNIPY+ISPS DCS+V+ Sbjct: 3 MVNKIACFVLL-CMVVVAPHAEA-LTCGQVTSTLAPCLPYLMNRGPLGG---CCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.600e-25 Identity = 59/117 (50.43%), Postives = 79/117 (67.52%), Query Frame = -2 Query: 123 LKLACAVLLMCMVMGAPI-AQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSI-RNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 467 +KLAC +LL CM++ PI + AA++CG V S+L AC+ YV CCSG+K+LNS A TTPDRQ CNC++ AA ++ LN A+G+P+ CGVNIPY+IS S +C VR Sbjct: 5 MKLAC-LLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPA--CCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118 The following BLAST results are available for this feature:
BLAST of CB290909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290909 ID=CB290909; Name=CB290909; organism=Citrus sinensis; type=EST; length=537bpback to top |