CB290909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.937e-15 Identity = 40/114 (35.09%), Postives = 68/114 (59.65%), Query Frame = -2 Query: 123 VLLMCMVMGAPIA---QAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAG--SIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRVR 449 VL +C+++ + A +AA++C V ++L C+ YV CC+GI+ L+ AT+ D+Q VC C+K+ G S ++ L A+ LP +CGV +PY+I PS +C+ ++ Sbjct: 5 VLPLCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYS--CCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.316e-15 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = -2 Query: 126 VLLMCMVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 449 +L++ +++G A+ C QV L C+PY+ CC+G+ SL +AA DRQ CNCLK+ A +I +N + A LP +CGVNI S +VDC+ + Sbjct: 13 LLVITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGGNPSPM--CCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.640e-14 Identity = 47/111 (42.34%), Postives = 62/111 (55.86%), Query Frame = -2 Query: 126 VLLMCMVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGV---NIPYQISPSVDCSRV 449 V+ M V GA + A++C QV S++ C Y+ CC I+ L+S TPDRQ+VCNCLKT A S + L A+ LP C V N+P ISP+VDCS+V Sbjct: 16 VVTMMNVWGAVPVEGAISCNQVVSAMTPCATYLIGNAATPAAT-CCPSIRGLDSQVKATPDRQAVCNCLKTQAKSY-GVKLGKAANLPGLCKVTDLNVP--ISPNVDCSKV 122
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.797e-14 Identity = 35/92 (38.04%), Postives = 56/92 (60.87%), Query Frame = -2 Query: 126 VTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 401 V CGQV SSL +C+P++T CC+G+++L + A T+ DR++ C C+K AA + + AS LP++CGV+I IS + +C + Sbjct: 1 VDCGQVNSSLASCIPFLTGGVASPSAS-CCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.388e-13 Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = -2 Query: 126 AQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 413 +++A++C V LQ C+ Y+T CC G+KSL +A TT+ D+++ C C+K+ A S+ + LA L CG ++P SP+VDC+ V Sbjct: 22 SESAISCSVVLQDLQPCVSYLTSGSGNPPET-CCDGVKSLAAATTTSADKKAACQCIKSVANSV-TVKPELAQALASNCGASLPVDASPTVDCTTV 115
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.368e-13 Identity = 38/109 (34.86%), Postives = 62/109 (56.88%), Query Frame = -2 Query: 126 AVLLMCMVMGAPIAQAAVTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 452 A+++M +M P A+TC VT +L C+PY+ CC+G K L A T DR++ C C KTAA ++ + ++AS LP +CG++ I+P+V+C+ + Sbjct: 12 AMIVMAQLMVHP--SVAITCNDVTGNLTPCLPYLRSGGKPTPA--CCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of CB290909 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.618e-12 Identity = 34/92 (36.96%), Postives = 50/92 (54.35%), Query Frame = -2 Query: 126 VTCGQVTSSLQACMPYVTXXXXXXXXXPCCSGIKSLNSAATTTPDRQSVCNCLKTAAGSIRNLNLNLASGLPRQCGVNIPYQISPSVDCSRV 401 V CGQV +L +C+P++T CC+G+ L A T D++ C C+KTAA N+ + AS LP +CGV I IS + +C + Sbjct: 1 VNCGQVNKALSSCVPFLTGFDTTPSLT-CCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91 The following BLAST results are available for this feature:
BLAST of CB290909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290909 ID=CB290909; Name=CB290909; organism=Citrus sinensis; type=EST; length=537bpback to top |