CB291020

Overview
NameCB291020
Unique NameCB291020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.362e-29
Identity = 65/164 (39.63%), Postives = 97/164 (59.15%), Query Frame = -2
Query:  171 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 653
            ++SG H+NPAVT G  +  +IS+L+G  Y ++Q +G+     L+K  T         ++     + A   V+ E ++TF LV+ V+    D ++  +   AP+AIG  + A  L+   + GASMNPA SFGPA+V  +W + WVYWVGP++GG LAG VY  FF
Sbjct:   75 HVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPSDVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVC-DNRRSDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGNWTDQWVYWVGPIVGGILAGAVYRLFF 237          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.362e-29
Identity = 66/164 (40.24%), Postives = 99/164 (60.37%), Query Frame = -2
Query:  171 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 653
            +ISGGH+NPAVT        IS+ + + Y IAQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+ ++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W NHW+YWVGP++G  LAG +YE+ F
Sbjct:   90 HISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHWIYWVGPIMGAVLAGALYEYVF 252          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29
Identity = 66/164 (40.24%), Postives = 99/164 (60.37%), Query Frame = -2
Query:  171 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 653
            +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         +++  G   A + ++ E+++TF LV+ ++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W+NHW+YWVGP+IG  LAG +YE+ F
Sbjct:   90 HISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVF 252          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29
Identity = 69/170 (40.59%), Postives = 103/170 (60.59%), Query Frame = -2
Query:  153 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN---GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 653
            +ISG H+NPAVT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+   G +    +L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIGF V    L    + G  +NPA SFG A+++ ++ +HWV+WVGP IGG LA ++Y+F    +S +
Sbjct:   71 HISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHNFQDHWVFWVGPFIGGALAVLIYDFILAPRSSD 239          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28
Identity = 66/164 (40.24%), Postives = 98/164 (59.76%), Query Frame = -2
Query:  171 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVG---AWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 653
            +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         ++   G   A + ++ E+++TF LV+ ++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W+NHW+YWVGP+IG  LAG +YE+ F
Sbjct:   90 HISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVF 252          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 2.798e-28
Identity = 67/170 (39.41%), Postives = 101/170 (59.41%), Query Frame = -2
Query:  153 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 653
            +ISG H+NPAVT G  +   IS+ R ++Y IAQ +G+ VA  +L  +T+  T ++     L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIG  V    L    + G  +NPA SFG A+++ ++ NHW++WVGP IGG LA ++Y+F    +S +
Sbjct:   69 HISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSD 237          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28
Identity = 64/164 (39.02%), Postives = 98/164 (59.76%), Query Frame = -2
Query:  171 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 653
            +ISGGH+NPAVT        IS+ + + Y  AQ LG+ +   +L  VT         +++    + A + ++ E+++TF LV+ ++A+    +    G+IA +AIG  V    L    + GASMNPA SFGPA++  +W+NHW+YWVGP+IG  LAG +YE+ F
Sbjct:   90 HISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVF 252          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 124.79 bits (312), Expect = 4.772e-28
Identity = 63/164 (38.41%), Postives = 98/164 (59.76%), Query Frame = -2
Query:  171 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 653
            ++SG H+NPAVT G  V  ++S+L+G  Y ++Q +G+     ++K  T  +      ++    G+     V+ E ++TF LV+ V+    D ++  +   AP+AIG  + A  LA   + GASMNPA SFGPA+V  ++ + WVYWVGP++GG +AG VY  FF
Sbjct:   74 HVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVC-DNRRTDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGNYTDLWVYWVGPIVGGIVAGAVYRLFF 236          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 6.233e-28
Identity = 67/170 (39.41%), Postives = 100/170 (58.82%), Query Frame = -2
Query:  153 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN---GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 653
            +ISG H+NPAVT G  +   IS+ R ++Y IAQ +G+ VA  +L  +T+   G +     L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIG  V    L    + G  +NPA SFG A+++ ++ NHW++WVGP IGG LA ++Y+F    +S +
Sbjct:   69 HISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSD 237          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 6.233e-28
Identity = 67/170 (39.41%), Postives = 101/170 (59.41%), Query Frame = -2
Query:  153 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 653
            +ISG H+NPAVT G  +   IS+LR ++Y IAQ +G+ VA  +L  +T+    ++     L+ GV +   +  EI+ T  LV  V AT  D ++  LG  AP+AIG  V    L    + G  +NPA SFG A+++ ++ NHW++WVGP IGG LA ++Y+F    +S +
Sbjct:   69 HISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRNFSNHWIFWVGPFIGGALAVLIYDFILAPRSSD 237          
The following BLAST results are available for this feature:
BLAST of CB291020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
AQP_AEDAE7.362e-2939.63Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP4_MOUSE7.362e-2940.24Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_DIPME9.616e-2940.24Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP1_PIG9.616e-2940.59Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP4_HUMAN1.640e-2840.24Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP1_HUMAN2.798e-2839.41Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP4_BOVIN3.654e-2839.02Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP_ANOGA4.772e-2838.41Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP1_PONAB6.233e-2839.41Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE6.233e-2839.41Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ba02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ba02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291020 ID=CB291020; Name=CB291020; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTTTTTTTTTTTTAGATCAACGGCCATAAATTAAACACCCATTAAA
AATAAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAACATCCGTGC
AAACTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTTGTTGGGAGC
TGCTCATGCGACTGGTTAATGAAGAAGAACTCGTAAACGATGCCAGCTAG
CCCACCACCGATGAGTGGCCCGACCCAGTAGACCCAGTGGTTGTCCCAGC
TCCAGCTCACCAAAGCTGGCCCGAATGACACTGCTGGGTTCATTGAAGCT
CCATCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAATGAAACCAAT
TGCAATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGTCCAGGGCTG
TGGCATACACTGGGTACACTAGTCCGAATGTCATCACGATCTCGAAAACG
ACTGCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGCAGATGTGGT
CTGGCCGTTGGTAACGAACTTAAGAAGCAAGCATGCGACGGTGGATCCAA
GAAGCTGGGCGATCCAGTAGAGGATGCCACGTAGAAGGGAGATGTTACCT
CCAACGAAGGCGCCAAAGGTGACAGCAGGATTAACGTGGCCACCGGAAAT
GTTGGCGCCAACGGCGACAGCAACGAAAAGGGCGAAAGCGTGAGCAACAG
AGGCGGCGACCAGGCCGGAGGGGGTATTGGCG
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