CB291020

Overview
NameCB291020
Unique NameCB291020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.938e-25
Identity = 65/168 (38.69%), Postives = 98/168 (58.33%), Query Frame = -2
Query:  159 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT--NGQTTSAF-ALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDN-HWVYWVGPLIGGGLAGIVYEFFFINQS 650
            +SGGH+NPA+T    VG  ISLLR + Y +AQL+G+     +L  +   N ++  A  AL++   A  AVV E+++TF L   V+++    +   +G+ A ++IG  V    L G  F G SMNPA SFGPA++   + + HWV+WVGP++G   A I+Y +     S
Sbjct:   63 VSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSSAHWVFWVGPIVGAATAAIIYFYLLFPHS 229          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.938e-25
Identity = 65/168 (38.69%), Postives = 96/168 (57.14%), Query Frame = -2
Query:  159 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ---TTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWD-NHWVYWVGPLIGGGLAGIVYEFFFINQS 650
            +SGGH+NPA+T    +G  ISLLR I Y  AQL+G+     +L ++  G      +  ALS+      AVV E+++TF L   ++++    +   +G+ A ++IG  V    L G  F G SMNPA SFGPA+V   +  +HWV+WVGP++G  LA I+Y +     S
Sbjct:   63 VSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAVLAAILYFYLLFPSS 229          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25
Identity = 66/169 (39.05%), Postives = 95/169 (56.21%), Query Frame = -2
Query:  177 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 650
            ISGGH+NPAVTFG F+   +SL+R ILY +AQ LG+     L+K       N     A  L++G      +  EI+ TF LVY V+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +W NHW++WVGP +G  +A   +++
Sbjct:  106 ISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQY 273          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25
Identity = 66/169 (39.05%), Postives = 97/169 (57.40%), Query Frame = -2
Query:  177 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 650
            ISGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K   +         A +L+SG      +  EI+ TF LVY V+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++      WD+HW++WVGPL+G  +A   +++
Sbjct:  106 ISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQY 273          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.424e-25
Identity = 67/171 (39.18%), Postives = 98/171 (57.31%), Query Frame = -2
Query:  177 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 650
            +SGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K      +V  G    A  LS+G      +  EI+ TF LVY V+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+HW++WVGP IG  +A   +++
Sbjct:  101 VSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYG--GGANELSAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQY 268          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 8.424e-25
Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = -2
Query:  177 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 653
            ++SG H+NPAVT    VG ++S LR   Y  AQLLG+     +L  +T  +     A   L +   A  AV  E+ +T  LV  ++A+  + +  +LG+ A ++IGF V    L G  F G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +  ++Y +
Sbjct:   61 HVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGSPA-LSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAVIGSLLYNY 221          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.100e-24
Identity = 66/169 (39.05%), Postives = 95/169 (56.21%), Query Frame = -2
Query:  177 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 650
            ISGGH+NPAVT G F+   +SL+R +LY +AQ LG+   C  +K   +   T     A  L+ G      +  EI+ TF LVY V+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++     +WD+ W++WVGP+IG   A   ++F
Sbjct:  101 ISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQF 268          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.437e-24
Identity = 61/161 (37.89%), Postives = 91/161 (56.52%), Query Frame = -2
Query:  180 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE 653
            ++SGGH+NPA+T    +   +SL R + Y +AQLLG+     +L  VT         LS+    VG     V E+++T   +  V+A+  D   G  G+ A + +GF +    L G  F GA MNPA SF PA+++ ++ NHWV+W GPL+G  LA ++YE
Sbjct:   61 HVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGRPGSAA-LPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRNFTNHWVFWAGPLLGAALAALLYE 220          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.437e-24
Identity = 63/168 (37.50%), Postives = 95/168 (56.55%), Query Frame = -2
Query:  159 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWD-NHWVYWVGPLIGGGLAGIVYEFFFINQS 650
            +SGGH+NPA+T    VG  ISLLR + Y +AQL+G+     +L  +  G      A   L++      AVV E+++TF L   ++++    +   +G+ A ++IG  V    L G  F G SMNPA SFGPA+V   +  +HWV+WVGP++G  +A I+Y +     S
Sbjct:   63 VSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAAVAAILYFYLLFPNS 229          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24
Identity = 69/171 (40.35%), Postives = 97/171 (56.73%), Query Frame = -2
Query:  177 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 650
            ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVY V+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+ W++WVGPLIG  +A   +++
Sbjct:  105 ISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 272          
The following BLAST results are available for this feature:
BLAST of CB291020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
AQP5_SHEEP4.938e-2538.69Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP5_MOUSE4.938e-2538.69Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
PIP21_ORYSJ6.450e-2539.05Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP21_MAIZE6.450e-2539.05Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP25_MAIZE8.424e-2539.18Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
AQP2_MOUSE8.424e-2537.65Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
PIP24_ARATH1.100e-2439.05Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
MIP_CHICK1.437e-2437.89Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP5_PIG1.437e-2437.50Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
PIP24_MAIZE1.877e-2440.35Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ba02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ba02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291020 ID=CB291020; Name=CB291020; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTTTTTTTTTTTTAGATCAACGGCCATAAATTAAACACCCATTAAA
AATAAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAACATCCGTGC
AAACTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTTGTTGGGAGC
TGCTCATGCGACTGGTTAATGAAGAAGAACTCGTAAACGATGCCAGCTAG
CCCACCACCGATGAGTGGCCCGACCCAGTAGACCCAGTGGTTGTCCCAGC
TCCAGCTCACCAAAGCTGGCCCGAATGACACTGCTGGGTTCATTGAAGCT
CCATCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAATGAAACCAAT
TGCAATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGTCCAGGGCTG
TGGCATACACTGGGTACACTAGTCCGAATGTCATCACGATCTCGAAAACG
ACTGCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGCAGATGTGGT
CTGGCCGTTGGTAACGAACTTAAGAAGCAAGCATGCGACGGTGGATCCAA
GAAGCTGGGCGATCCAGTAGAGGATGCCACGTAGAAGGGAGATGTTACCT
CCAACGAAGGCGCCAAAGGTGACAGCAGGATTAACGTGGCCACCGGAAAT
GTTGGCGCCAACGGCGACAGCAACGAAAAGGGCGAAAGCGTGAGCAACAG
AGGCGGCGACCAGGCCGGAGGGGGTATTGGCG
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