CB291020

Overview
NameCB291020
Unique NameCB291020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24
Identity = 69/171 (40.35%), Postives = 97/171 (56.73%), Query Frame = -2
Query:  177 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 650
            ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVY V+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+ W++WVGPLIG  +A   +++
Sbjct:  106 ISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 273          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24
Identity = 67/169 (39.64%), Postives = 95/169 (56.21%), Query Frame = -2
Query:  177 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 650
            ISGGH+NPAVTFG F+   +SL+R +LY IAQ LG+     L+K   +         A  LS G      +  EI+ TF LVY V+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+ W++WVGPLIG  +A   +++
Sbjct:  105 ISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 272          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24
Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = -2
Query:  177 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 653
            ++SG H+NPAVT    VG ++S LR   Y  AQLLG+     +L  +T  +     A   L +   A  AV  E+ +T  LV  ++A+  + +  +LG+ A ++IGF V    L G  F G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +  ++Y +
Sbjct:   61 HVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGSPA-LSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAIIGSLLYNY 221          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24
Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = -2
Query:  177 SGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 647
            SG H NPAVT    VG +ISL R + Y  AQL G+TV   LL  VT G   +T     + +      AV  E+V+T  LV  V+A+ +D ++ +LG+ A + IG  V    L G  F G SMNPA SFGPA++   +  HW++WVGPL G  LA ++Y F
Sbjct:   74 SGAHANPAVTLAYLVGSHISLPRAVAYIAAQLAGATVGAALLYGVTPGGVRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFAS-MDSRQ-TLGSPAAM-IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNF 230          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.201e-24
Identity = 67/171 (39.18%), Postives = 97/171 (56.73%), Query Frame = -2
Query:  177 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 650
            +SGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVY V+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +W +HW++WVGPLIG  +A   +++
Sbjct:  106 VSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQY 273          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.181e-24
Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = -2
Query:  180 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 650
            ISGGH+NPAVTFG F+   +SL+R +LY  AQ LG+     L+K   +G        A  +S+G      +  EI+ TF LVY V+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A+V   S +W + W++WVGP IG  +A + ++
Sbjct:  105 ISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQ 271          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.460e-24
Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = -2
Query:  177 SGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 647
            SG H NPAVT    VG +ISL R + Y  AQL+G+TV   LL  V  G   +T     + + V    AV  E+++T  LV  V+A+  D ++ S G+ A + IG  V    L G  F G SMNPA SFGPA++   +  HWV+WVGPL+G  LA ++Y F
Sbjct:   77 SGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFAST-DSRQTS-GSPATM-IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGKFTVHWVFWVGPLMGALLASLIYNF 233          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.460e-24
Identity = 60/162 (37.04%), Postives = 91/162 (56.17%), Query Frame = -2
Query:  177 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 653
            ++SG H+NPAVT    VG ++S LR + Y  AQLLG+     LL  +T        A   L++   A  AV  E+ +T  LV  ++ +  D ++G       ++IGF V    L G  + G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +A ++Y +
Sbjct:   61 HVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPST-DKRRGKQLGHPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGKFDDHWVFWIGPLVGAIVASLLYNY 221          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.131e-24
Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = -2
Query:  180 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 650
            ISGGH+NPAVTFG F+   +SL+R ILY +AQ LG+     L+K   +         A  L++G      +  EI+ TF LVY V+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A+V   S +W + W++WVGP IG  +A + ++
Sbjct:  100 ISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQ 266          
BLAST of CB291020 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.216e-23
Identity = 63/169 (37.28%), Postives = 95/169 (56.21%), Query Frame = -2
Query:  177 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYPVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 650
            ISGGH+NPAVTFG  +   +S++R ++Y +AQ LG  V   ++K +     N     A  ++SG     A+  EI+ TF LVY V+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+HW++W GP IG   A   +++
Sbjct:   96 ISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQY 263          
The following BLAST results are available for this feature:
BLAST of CB291020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PIP23_MAIZE1.877e-2440.35Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP22_ORYSJ1.877e-2439.64Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
AQP2_RAT1.877e-2437.65Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
AQP6_RAT2.451e-2443.13Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]
PIP23_ORYSJ3.201e-2439.18Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP26_MAIZE4.181e-2439.29Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
AQP6_HUMAN5.460e-2443.13Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQP2_SHEEP5.460e-2437.04Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
PIP25_ORYSJ7.131e-2439.29Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP26_ORYSJ1.216e-2337.28Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ba02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ba02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291020 ID=CB291020; Name=CB291020; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTTTTTTTTTTTTAGATCAACGGCCATAAATTAAACACCCATTAAA
AATAAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAACATCCGTGC
AAACTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTTGTTGGGAGC
TGCTCATGCGACTGGTTAATGAAGAAGAACTCGTAAACGATGCCAGCTAG
CCCACCACCGATGAGTGGCCCGACCCAGTAGACCCAGTGGTTGTCCCAGC
TCCAGCTCACCAAAGCTGGCCCGAATGACACTGCTGGGTTCATTGAAGCT
CCATCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAATGAAACCAAT
TGCAATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGTCCAGGGCTG
TGGCATACACTGGGTACACTAGTCCGAATGTCATCACGATCTCGAAAACG
ACTGCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGCAGATGTGGT
CTGGCCGTTGGTAACGAACTTAAGAAGCAAGCATGCGACGGTGGATCCAA
GAAGCTGGGCGATCCAGTAGAGGATGCCACGTAGAAGGGAGATGTTACCT
CCAACGAAGGCGCCAAAGGTGACAGCAGGATTAACGTGGCCACCGGAAAT
GTTGGCGCCAACGGCGACAGCAACGAAAAGGGCGAAAGCGTGAGCAACAG
AGGCGGCGACCAGGCCGGAGGGGGTATTGGCG
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