CB291034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291034 vs. ExPASy Swiss-Prot
Match: H2A2C_HUMAN (Histone H2A type 2-C OS=Homo sapiens GN=HIST2H2AC PE=1 SV=4) HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29 Identity = 66/105 (62.86%), Postives = 77/105 (73.33%), Query Frame = -3 Query: 222 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKA 536 LQFPVGR+ R L+ G YAERVGAGAP AGNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNI +LLPKKT + +K+ Sbjct: 24 LQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHKAKS 128
BLAST of CB291034 vs. ExPASy Swiss-Prot
Match: H2A2C_BOVIN (Histone H2A type 2-C OS=Bos taurus GN=HIST2H2AC PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29 Identity = 66/105 (62.86%), Postives = 77/105 (73.33%), Query Frame = -3 Query: 222 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKA 536 LQFPVGR+ R L+ G YAERVGAGAP AGNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNI +LLPKKT + +K+ Sbjct: 24 LQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHKAKS 128
BLAST of CB291034 vs. ExPASy Swiss-Prot
Match: H2A3_CHICK (Histone H2A-III OS=Gallus gallus PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.147e-29 Identity = 66/105 (62.86%), Postives = 76/105 (72.38%), Query Frame = -3 Query: 222 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKA 536 LQFPVGR+ R L+ G YAERVGAGAP AGN ARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNI +LLPKKT + +KA Sbjct: 24 LQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNPARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTDSHKAKA 128
BLAST of CB291034 vs. ExPASy Swiss-Prot
Match: H2A_EMENI (Histone H2A OS=Emericella nidulans GN=htaA PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.804e-29 Identity = 65/102 (63.73%), Postives = 74/102 (72.55%), Query Frame = -3 Query: 231 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSG 536 L FPVGR+ R L+ G YA+RVGAGAP AGNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNIH LLPKKT +G Sbjct: 25 LAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKAG 126
BLAST of CB291034 vs. ExPASy Swiss-Prot
Match: H2A_COCIM (Histone H2A OS=Coccidioides immitis GN=HTA1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.804e-29 Identity = 66/108 (61.11%), Postives = 75/108 (69.44%), Query Frame = -3 Query: 213 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 536 L FPVGR+ R L+ G YA+RVGAGAP AGNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGVMP IH LLPKKT +G + E Sbjct: 25 LAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVMPYIHQNLLPKKTPKTGKNPSQE 132
BLAST of CB291034 vs. ExPASy Swiss-Prot
Match: H2A2B_MOUSE (Histone H2A type 2-B OS=Mus musculus GN=Hist2h2ab PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 2.804e-29 Identity = 66/98 (67.35%), Postives = 73/98 (74.49%), Query Frame = -3 Query: 243 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 536 LQFPVGR+ R L+ G YAERVGAGAP AGNAARDNKKTRI+PRH+QLAVRNDEEL+KLLG VTIA GGV+PNI +LLPKKT Sbjct: 24 LQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CB291034 vs. ExPASy Swiss-Prot
Match: H2A2B_HUMAN (Histone H2A type 2-B OS=Homo sapiens GN=HIST2H2AB PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 2.804e-29 Identity = 66/98 (67.35%), Postives = 73/98 (74.49%), Query Frame = -3 Query: 243 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 536 LQFPVGR+ R L+ G YAERVGAGAP AGNAARDNKKTRI+PRH+QLAVRNDEEL+KLLG VTIA GGV+PNI +LLPKKT Sbjct: 24 LQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CB291034 vs. ExPASy Swiss-Prot
Match: H2A1A_HUMAN (Histone H2A type 1-A OS=Homo sapiens GN=HIST1H2AA PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 2.804e-29 Identity = 66/105 (62.86%), Postives = 76/105 (72.38%), Query Frame = -3 Query: 222 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKA 536 LQFPVGRI R L+ G YAER+GAGAP AGNA+RDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNI +LLPKKT + KA Sbjct: 24 LQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTESHHHKA 128
BLAST of CB291034 vs. ExPASy Swiss-Prot
Match: H2A_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.662e-29 Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = -3 Query: 207 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADEDS 536 LQFPVGRI R+LK G+YA+ VG GAP AGNAARDNKKTRI+PRH+ LA+RNDEEL KLLG VTIA+GGV+PNI+ +LLPKKT S +++ Sbjct: 37 LQFPVGRIGRYLKKGRYAQXVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLGGVTIAHGGVLPNINPVLLPKKTAEKASSGGSKEA 146
BLAST of CB291034 vs. ExPASy Swiss-Prot
Match: H2A_CAEEL (Histone H2A OS=Caenorhabditis elegans GN=his-3 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.662e-29 Identity = 71/123 (57.72%), Postives = 79/123 (64.23%), Query Frame = -3 Query: 240 MAGRGKTLXXXXXXXXXXXXXXXGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTG 608 M+GRGK GLQFPVGR+ R L+ G YA+RVGAGAP AGNAARDNKKTRI PRH+QLAVRNDEEL+KLL VTIA GGV+PNI +LLPKKTG Sbjct: 1 MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123 The following BLAST results are available for this feature:
BLAST of CB291034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291034 ID=CB291034; Name=CB291034; organism=Citrus sinensis; type=EST; length=670bpback to top |