CB291036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 5.058e-51 Identity = 97/177 (54.80%), Postives = 126/177 (71.19%), Query Frame = -2 Query: 310 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVI 840 IGSELVQKY+GEGARMVRELF++A+ K I+F DE+D+IG R D GD EVQRT+++++ ++DGFD RGN+++L ATNRPD LDPALLRPGR DR ++ +P E+R QI KIH R MN D+ +A + S+GAD+ ++ EAGMFAIR R V DF AV KV+ Sbjct: 225 IGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDFNAAVAKVM 401
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 201.06 bits (510), Expect = 6.605e-51 Identity = 94/178 (52.81%), Postives = 131/178 (73.60%), Query Frame = -2 Query: 307 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIK 840 +GSEL+QKY+G+G R+ R++F++A IVF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD RG++KV+MATN+ +TLDPAL+RPGR+DRK+ F PDL ++ +I IHT MN D+ E L + +GADI+++CTEAG+ A+R RR VT +DF A +V+K Sbjct: 248 VGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMK 425
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.127e-50 Identity = 91/177 (51.41%), Postives = 130/177 (73.45%), Query Frame = -2 Query: 310 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVI 840 + SE V+KY+GEGAR+VR +F++A+ K I+F DE+DA+ R GD EVQRT+++++ +LDGF++RGN+ ++ ATNRPD LDPALLRPGR DR +E LP+ + R +I KIHT M ++ ELLAR+ ++GAD++++CTEAGMFAIR R VT DF+DAV+K++ Sbjct: 217 VASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIM 393
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.127e-50 Identity = 89/184 (48.37%), Postives = 136/184 (73.91%), Query Frame = -2 Query: 289 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFS 840 +GSELV+K++GEGA++VR++F++A+ K CI+F DE+DA+ R + GGD EVQRT+++++ ++DGFD+RG++K++ ATNRPD LDPA+LRPGR DR +E +PD + R +I KIHT MN + + +A++ N GAD+++VCTEAGMFAIR R+ + DF +A++K+ +K S Sbjct: 214 VGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKEKCS 396
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.127e-50 Identity = 90/184 (48.91%), Postives = 135/184 (73.37%), Query Frame = -2 Query: 289 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFS 840 +GSELV+K++GEGA++VR++F++A+ K CI+F DE+DA+ R + GGD EVQRT+++++ ++DGFD+RG++K++ ATNRPD LDPA+LRPGR DR +E +PD + R I KIHT MN + + +A+L N GAD+++VCTEAGMFAIR R+ + DF +A++K+ +K S Sbjct: 214 VGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKEKCS 396
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.922e-50 Identity = 93/182 (51.10%), Postives = 128/182 (70.33%), Query Frame = -2 Query: 295 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQK 840 +GSELVQKY+GEGAR+VRELF +A+ + I+F DE+DAIG R D GD EVQRT+++++ ++DGFD RG++K++ ATNR D LD ALLRPGR DR +E LPD + R I KIHT+ MN D+ ++RL GAD+R++C EAGMFAIR R V +DF+ A++K+ + + Sbjct: 219 VGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAIDKLALDFDR 400
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.510e-50 Identity = 89/184 (48.37%), Postives = 134/184 (72.83%), Query Frame = -2 Query: 289 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFS 840 +GSELV+K++GEGA++VR++F++A+ K CI+F DE+DA+ R + GGD EVQRT+++++ ++DGFD+RG++K++ ATNRPD LDPA+LRPGR DR +E +PD + R I KIHT MN + + +A++ N GAD+++VCTEAGMFAIR R+ + DF +A+ K+ +K S Sbjct: 214 VGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAITKITGKKEKCS 396
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.510e-50 Identity = 92/176 (52.27%), Postives = 125/176 (71.02%), Query Frame = -2 Query: 313 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKV 840 +GSELVQKY+GEGAR+VRELF +A+ K I+F DE+DA+G +R + GD EVQRT+++++ +DGF+ RG++K++ ATNR D LD ALLRPGR DR +E LPD E R I K+HTRT+ E + +A L GAD+R++C EAGM+AIR R +T +DFL A+ KV Sbjct: 244 VGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEKV 419
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.125e-49 Identity = 90/178 (50.56%), Postives = 130/178 (73.03%), Query Frame = -2 Query: 307 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIK 840 +GSELV+K++GEGA +V+++F++A+ K I+F DE+DAI R D GGD EVQRT+++++ ++DGFDARG++K++ ATNRPD LDPA+LRPGR DR +E PD + R +I KIHTR MN D+ E +A++ GA+++++CTEAGM AIR R VT DF AV K+++ Sbjct: 236 VGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIME 413
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.125e-49 Identity = 94/175 (53.71%), Postives = 124/175 (70.86%), Query Frame = -2 Query: 316 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNK 840 +GSELVQKY+GEGAR+VRELF +A+ K IVF DE+DAIG +R + GD EVQRT+++++ +DGF+ RG++K++ ATNR D LD ALLRPGR DR +E LPD E R I K+HTR MN D+ +ARL GA++ ++C EAGMFAIR V ++DFL A+NK Sbjct: 219 VGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFAIRKEHPQVDQEDFLTALNK 393 The following BLAST results are available for this feature:
BLAST of CB291036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 370
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291036 ID=CB291036; Name=CB291036; organism=Citrus sinensis; type=EST; length=841bpback to top |