CB291037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.856e-44 Identity = 88/155 (56.77%), Postives = 115/155 (74.19%), Query Frame = -1 Query: 301 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIK 765 AR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R R VT++DF AV KV++ Sbjct: 238 AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 392
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.395e-43 Identity = 82/153 (53.59%), Postives = 109/153 (71.24%), Query Frame = -1 Query: 307 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKV 765 AR + CI+F DE+DAIGG RF +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+ ++R I KIH + +I +E + +L GAD+ +VCTEAGMFAIRA V ++DF+ AV KV Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.497e-43 Identity = 83/159 (52.20%), Postives = 114/159 (71.70%), Query Frame = -1 Query: 289 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQK 765 A+ K I+F DE+DAIG R D+ GG+ EV RT+++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD E R +I K+HTR M R + L+A L ++GAD++++ TEAGMFAIR R VT++DFL A++KV+ +K Sbjct: 226 AKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVLGNEKK 383
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.497e-43 Identity = 83/158 (52.53%), Postives = 116/158 (73.42%), Query Frame = -1 Query: 271 IVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPK 744 IVF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFDAR ++KV+MATNR +TLDPAL+RPGR+DRK+EF LPD++++ +IF+IHT MN D+ E + +GADI+++CTE+G+ A+R R VT DF A KV+ Y+K + P+ Sbjct: 280 IVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVL--YRKTAGAPE 435
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.181e-42 Identity = 88/155 (56.77%), Postives = 115/155 (74.19%), Query Frame = -1 Query: 301 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIK 765 AR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R R VT++DF AV KV++ Sbjct: 233 AREHAPSIIFMDEIDSIG-SRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 386
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.849e-42 Identity = 81/154 (52.60%), Postives = 113/154 (73.38%), Query Frame = -1 Query: 304 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVI 765 A+ K I+F DE+DAIG R D+ GG+ EV RT+++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD R +I K+HTR MN R++ ++A + ++GAD++++ TEAGMFAIR R VT++DFL AV+KV+ Sbjct: 227 AKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNL-RNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVL 379
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.849e-42 Identity = 81/159 (50.94%), Postives = 115/159 (72.33%), Query Frame = -1 Query: 289 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQK 765 A+ K I+F DE+DAIG R D+ GG+ EV RT+++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD E R +I K+HTR M +++ ++A + ++GAD++++ TEAGMFAIR R VT++DFL AV+KV+ +K Sbjct: 229 AKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.849e-42 Identity = 85/155 (54.84%), Postives = 109/155 (70.32%), Query Frame = -1 Query: 301 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIK 765 A+ K I+F DE+DAI R + GD EVQRTM++++ +LDGFD RG++KV+ ATNR D LDPA+LRPGR DR +E LP E R QIFKIHTR M D+ F+ LAR+ ++GADI+++CTEAGMFAIR R VT DF A+ KV+K Sbjct: 230 AKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLK 384
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.860e-42 Identity = 83/158 (52.53%), Postives = 116/158 (73.42%), Query Frame = -1 Query: 271 IVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPK 744 IVF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL+RPGR+DRK+EF LPD +++ +IF+IHT M D+ + L + +GADI+++CTEAG+ A+R R VT +DF + V+ Y+K TP+ Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL--YKKQEGTPE 436
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.860e-42 Identity = 83/158 (52.53%), Postives = 116/158 (73.42%), Query Frame = -1 Query: 271 IVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPK 744 IVF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL+RPGR+DRK+EF LPD +++ +IF+IHT M D+ + L + +GADI+++CTEAG+ A+R R VT +DF + V+ Y+K TP+ Sbjct: 281 IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL--YKKQEGTPE 436 The following BLAST results are available for this feature:
BLAST of CB291037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 297
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291037 ID=CB291037; Name=CB291037; organism=Citrus sinensis; type=EST; length=765bpback to top |