CB291037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 167.162 bits (422), Expect = 9.165e-41 Identity = 80/148 (54.05%), Postives = 108/148 (72.97%), Query Frame = -1 Query: 301 IVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIK 744 IVF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD RG++KV+MATN+ +TLDPAL+RPGR+DRK+ F PDL ++ +I IHT MN D+ E L + +GADI+++CTEAG+ A+R R VT +DF A +V+K Sbjct: 278 IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMK 425
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.197e-40 Identity = 83/153 (54.25%), Postives = 106/153 (69.28%), Query Frame = -1 Query: 307 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKV 765 A+ K CI+F DE+DAIG RFD V GD EVQRTMLE++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+EF P E+R +I +IH+R MN D+ FE LAR + GA +++VC EAGM A+R VT +DF + + +V Sbjct: 259 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQV 411
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 1.197e-40 Identity = 83/153 (54.25%), Postives = 106/153 (69.28%), Query Frame = -1 Query: 307 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKV 765 A+ K CI+F DE+DAIG RFD V GD EVQRTMLE++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+EF P E+R +I +IH+R MN D+ FE LAR + GA +++VC EAGM A+R VT +DF + + +V Sbjct: 265 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQV 417
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.197e-40 Identity = 81/165 (49.09%), Postives = 115/165 (69.70%), Query Frame = -1 Query: 271 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFSATPK 765 A IVF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG++KVLMATNR ++LDPAL+RPGR+DRK+EF LPD +++ +IF+IHT M +++ E +GADI+++CTEAG+ A+R R VT +DF + V+ Y+K P+ Sbjct: 277 AEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVL--YRKKEGAPE 439
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.042e-40 Identity = 76/161 (47.20%), Postives = 113/161 (70.19%), Query Frame = -1 Query: 283 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFS 765 A+ K CI+F DE+DA+ R + GGD EVQRT+++++ ++DGFD+RG++K++ ATNRPD LDPA+LRPGR DR +E +PD + R +I KIHT MN + + +A++ N GAD+++VCTEAGMFAIR R+ + DF +A++K+ +K S Sbjct: 237 AKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKEKCS 396
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.042e-40 Identity = 77/161 (47.83%), Postives = 112/161 (69.57%), Query Frame = -1 Query: 283 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFS 765 A+ K CI+F DE+DA+ R + GGD EVQRT+++++ ++DGFD+RG++K++ ATNRPD LDPA+LRPGR DR +E +PD + R I KIHT MN + + +A+L N GAD+++VCTEAGMFAIR R+ + DF +A++K+ +K S Sbjct: 237 AKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKEKCS 396
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.548e-40 Identity = 76/161 (47.20%), Postives = 111/161 (68.94%), Query Frame = -1 Query: 283 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIKGYQKFS 765 A+ K CI+F DE+DA+ R + GGD EVQRT+++++ ++DGFD+RG++K++ ATNRPD LDPA+LRPGR DR +E +PD + R I KIHT MN + + +A++ N GAD+++VCTEAGMFAIR R+ + DF +A+ K+ +K S Sbjct: 237 AKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAITKITGKKEKCS 396
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.548e-40 Identity = 85/156 (54.49%), Postives = 112/156 (71.79%), Query Frame = -1 Query: 301 ARSKKACIVFYDEVDAIGGARFDDGVGG-DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIK 765 AR I+F DE+D+IG R + G GG D+EVQRTMLE++NQLDGF++ NIK++MATNR D LDPALLRPGR+DRK+EF P+ +R I KIH+R MN R I +A + ++GA+I++ CTEAGMFA+R R VT++D AV KV+K Sbjct: 245 AREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLEMAVAKVMK 400
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.940e-40 Identity = 78/155 (50.32%), Postives = 108/155 (69.68%), Query Frame = -1 Query: 301 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKVIK 765 A+ K I+F DE+DAI R D GGD EVQRT+++++ ++DGFDARG++K++ ATNRPD LDPA+LRPGR DR +E PD + R +I KIHTR MN D+ E +A++ GA+++++CTEAGM AIR R VT DF AV K+++ Sbjct: 259 AKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIME 413
BLAST of CB291037 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 164.466 bits (415), Expect = 5.940e-40 Identity = 82/153 (53.59%), Postives = 105/153 (68.63%), Query Frame = -1 Query: 307 ARSKKACIVFYDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA*RKTVTEKDFLDAVNKV 765 A+ K CI+F DE+DAIG RFD V GD EVQRTMLE++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+EF P E+R +I +IH+R MN D+ FE LAR + GA +++VC EAGM A+R V +DF + + +V Sbjct: 259 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 411 The following BLAST results are available for this feature:
BLAST of CB291037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 297
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291037 ID=CB291037; Name=CB291037; organism=Citrus sinensis; type=EST; length=765bpback to top |