CB291044

Overview
NameCB291044
Unique NameCB291044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.324e-47
Identity = 90/170 (52.94%), Postives = 120/170 (70.59%), Query Frame = -2
Query:  152 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE-FFFINQSHEQL 658
            ++SGGH+NPAVT G  V G+I+ LR +LY  AQLL S++AC+LL+ ++ G  T   AL +G+     +V E+++TF L++  YA  LDP+   + TI P+  G IVGAN LAGG F GASMNPA SFGPA+ +  W NHWVYW+GPL+GG LAG VYE  F +N++HE L
Sbjct:   84 HVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPRS-QVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATGVWTNHWVYWIGPLLGGSLAGFVYESLFMVNKTHEPL 252          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.497e-46
Identity = 89/170 (52.35%), Postives = 116/170 (68.24%), Query Frame = -2
Query:  152 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE-FFFINQSHEQL 658
            ++SGGH+NPAVT      G+I+  R  LY  AQLL S++AC+LL+ +T G  T    L SG+G    +V EI++TF L++ VYAT LDP+    G   P+  G IVGAN +AGG F GASMNPA SFGPAL +  W +HW+YW+GPLIGG LAG+VYE  F + ++HE L
Sbjct:   78 HVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRSSVPG-FGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATGVWTHHWIYWLGPLIGGPLAGLVYESLFLVKRTHEPL 246          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.497e-46
Identity = 89/170 (52.35%), Postives = 115/170 (67.65%), Query Frame = -2
Query:  152 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE-FFFINQSHEQL 658
            ++SGGH+NPAVT G  V G+I+ LR +LY  AQLL S+ AC+LL+ ++ G  T   AL  G+     +V E+++TF L++  YA  LDP+   +  I P+  G IVGAN LAGG F GASMNPA SFGPAL +  W NHWVYW+GPL+GG LAG VYE  F + + HE L
Sbjct:   82 HVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPRS-QVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGDWTNHWVYWIGPLLGGPLAGFVYESLFLVQKMHEPL 250          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 6.800e-44
Identity = 89/175 (50.86%), Postives = 114/175 (65.14%), Query Frame = -2
Query:  149 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIN-----QSHEQLP 658
            ++SGGH+NPAVT    VGG+I+L R  LY  AQL GS++ACLLL+ +T G  T   AL+ GVG    V  E V TF L+  + AT LDP++ +     P+  G +VGAN +AGGA  GASMNPA SFGPAL +  W +HWVYWVGPL GG LA + YE  F++      +H+ LP
Sbjct:   80 HVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGEWAHHWVYWVGPLAGGPLAVVAYELLFMDVEDAGGAHQPLP 254          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.882e-44
Identity = 92/172 (53.49%), Postives = 113/172 (65.70%), Query Frame = -2
Query:  149 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE--FFFINQSHEQLP 658
            +ISGGHVNPAVT    VGG+++L R  LY  AQ+L S+ AC LL+ +T G  T   AL+ GVG    VV E V TF L++ +YAT LDP+K  L    P+  G +VGAN +AG A  GASMNPA SFGPA+ S  W +HWVYWVGPL GG LA +VYE  F     +H+ LP
Sbjct:   75 HISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRK-LLPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVWTHHWVYWVGPLAGGPLAVLVYECCFMAAAPTHDLLP 245          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.622e-37
Identity = 77/158 (48.73%), Postives = 104/158 (65.82%), Query Frame = -2
Query:  185 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE 658
            N+SGGHVNPAVTF   V G IS+   + YW +Q++ S +ACL+LK+    Q    + ++  +  + A V E V+ F LVYTV+ TA DP++G    + PI IGF+ GAN+LA G F G SMNPA +FG A+V  S+ N  VYWVGPL+GG  A +VY+
Sbjct:   80 NVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKNQAVYWVGPLLGGATAALVYD 236          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 2.424e-33
Identity = 71/166 (42.77%), Postives = 105/166 (63.25%), Query Frame = -2
Query:  185 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLG--------TIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE 658
            ++SGGHVNPAVTF   +GG+I++   I YW +Q+LGST ACL+L  ++ GQ      ++  +  + A + E V+TF +VYTV+  A DP+ G  G         +  + +G + GA +LA G+  GASMNPA SFGPA+VS  + N  VYW GP++G  +A +V++
Sbjct:   75 DVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVH-VAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGHYSNQAVYWAGPMVGAAVAALVHQ 239          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.501e-32
Identity = 74/162 (45.68%), Postives = 100/162 (61.73%), Query Frame = -2
Query:  182 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 658
            +ISG HVNPAVTF   VG  +SLLR I Y  AQLLG+     +L  VT        AL++   GV    A   EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGLA ++Y+F
Sbjct:   61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLASLLYDF 221          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.330e-31
Identity = 72/162 (44.44%), Postives = 100/162 (61.73%), Query Frame = -2
Query:  182 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 658
            +ISG HVNPAVTF   VG  +SLLR I Y +AQLLG+     +L  VT        AL++   GV    A + EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IG GL  ++Y+F
Sbjct:   61 HISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDF 221          
BLAST of CB291044 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.269e-31
Identity = 72/162 (44.44%), Postives = 100/162 (61.73%), Query Frame = -2
Query:  182 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKLVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 658
            +ISG HVNPAVTF   VG  +SLLR I Y +AQLLG+     +L  VT        AL++   GV    A + EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IG GL  ++Y+F
Sbjct:   61 HISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDF 221          
The following BLAST results are available for this feature:
BLAST of CB291044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
TIP42_MAIZE1.324e-4752.94Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1[more]
TIP41_ORYSJ2.497e-4652.35Probable aquaporin TIP4-1 OS=Oryza sativa subsp. j... [more]
TIP41_MAIZE2.497e-4652.35Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
TIP42_ORYSJ6.800e-4450.86Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]
TIP43_MAIZE8.882e-4453.49Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP51_ARATH1.622e-3748.73Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP51_ORYSJ2.424e-3342.77Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
MIP_RABIT3.501e-3245.68Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
MIP_BOVIN1.330e-3144.44Lens fiber major intrinsic protein OS=Bos taurus G... [more]
MIP_SHEEP2.269e-3144.44Lens fiber major intrinsic protein OS=Ovis aries G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02bb04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02bb04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291044 ID=CB291044; Name=CB291044; organism=Citrus sinensis; type=EST; length=773bp
TTTTTTTTTTTTTTTTTGGAAAAGATCAACGGCCATAAATTAAACACAAA
TTAAAAATAAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAACATC
CGTGCAAACTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTTGTTG
GGAGCTGCTCATGCGACTGGTTAATGAAGAAAAACTCGTAAACGATGCCA
GCTAGCCCACCACCGATGAGTGGCCCGACCCAGTAAACCCAGTGGTTGTC
CCAGCTCCAGCTCACCAAAGCTGGCCCGAATGACACTGCTGGGTTCATTG
AAGCTCCATCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAATGAAA
CCAATTGCAATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGTCCAG
GGCTGTGGCATACACTGTGTACACTAGTCCGAATGTCATCACGATCTCGA
AAACGACTGCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGCAGAT
GTGGTCTGGCCGTTGGTAACCAACTTAAGAAGCAAGCATGCGACGGTGGA
TCCAAGAAGCTGGGCGATCCAGTAGAGGATGCCACGTAGAAGGGAGATGT
TACCTCCAACGAAGGCGCCAAAGGTGACAGCAGGATTAACGTGGCCACCG
GAAATGTTGGCGCCAACGGCGACAGCAACGAAAAGGGCGAAAGCGTGAGC
AACAGAGGCGGCGACAAGGCCGGAGGGGGTATTGGCGCCGTTGTGAGTGA
GCTTGTTGAAGGCCATCCTCGTG
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