CB291051
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291051 vs. ExPASy Swiss-Prot
Match: RL11_PICTO (50S ribosomal protein L11P OS=Picrophilus torridus GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.213e-17 Identity = 54/158 (34.18%), Postives = 94/158 (59.49%), Query Frame = -3 Query: 270 VVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGPVKEILGTCVFVGCTVDGKDPRDLQQEITDGDVEI 731 +V V V GG+ L P +GPLGL+ ++ +DI ++T K++ G++V V + V + K + VP +AL+ K L + KK + I GN TL+ + ++A+ R ++ ++ G V E+LG+ V +G TVDG+DP+++Q+ I +G++EI Sbjct: 1 MVAVKTMVEGGKATTGPPLGPALGPLGLNLGQVVKDINEKT-KNFAGMQVPVTVNVIDPATKKYEIIVGVPPTSALLKKELGIEKGASKKKEKIA--GNATLEQIKKVAESKRSALLSYNMKGAVLEVLGSAVSLGITVDGRDPKEVQKMIKNGEIEI 155
BLAST of CB291051 vs. ExPASy Swiss-Prot
Match: RL11_METTH (50S ribosomal protein L11P OS=Methanobacterium thermoautotrophicum GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.502e-17 Identity = 52/150 (34.67%), Postives = 90/150 (60.00%), Query Frame = -3 Query: 282 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN--RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGPVKEILGTCVFVGCTVDGKDPRDLQQEITDG 722 V + + GG+ L P IGPLG++ ++ E+I ++TA D++G++V VK+ V R +V V P AL++ LK + + + +I+++ V++IA++ ++ D VKEI+GTCV +G TV+GKDPR++Q+E+ G Sbjct: 6 VEILIDGGKATPGPPLGPAIGPLGINMMQVVEEINRKTA-DFEGMKVPVKIIVDTDTRDFEVEVGTPPTTALIMDELKLEKGSQDP--GMDKIADISMEQVLKIARMKFDALLSNDYKRAVKEIMGTCVSMGITVNGKDPREVQREVDQG 152
BLAST of CB291051 vs. ExPASy Swiss-Prot
Match: RL11_METHJ (50S ribosomal protein L11P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl11p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.502e-17 Identity = 52/150 (34.67%), Postives = 86/150 (57.33%), Query Frame = -3 Query: 282 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ---AKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGPVKEILGTCVFVGCTVDGKDPRDLQQEITDG 722 V V V GG+ A L P +GPLG++ K + ++I K+TA + G++V V++ V ++ V + P+ A ++ +A E TK + G++ L+ + IAK+ ++ DL VKE++GTCV +G TV GK P+D+ +EI G Sbjct: 5 VEVLVPGGKATAGPPLGPALGPLGINVKAVVDEINKKTAS-FNGMQVPVRVEVDEKKNFTISVGIPPTTALIMKEAGVEKGSGEPNTKIV---GDVPLEAAVTIAKMKLDDMLSYDLKNAVKEVVGTCVSLGITVSGKKPKDMLKEIDSG 150
BLAST of CB291051 vs. ExPASy Swiss-Prot
Match: RL11_METMJ (50S ribosomal protein L11P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17 Identity = 53/152 (34.87%), Postives = 88/152 (57.89%), Query Frame = -3 Query: 273 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVV--PSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGPVKEILGTCVFVGCTVDGKDPRDLQQEITDGDVE 722 V V V GG+ A L P +GPLG++ K + +DI K+TA ++ G++V V +TV +++ V P ALV+K + + + G++ L+ + IA++ ++ DL VKE+LGTCV VG TV+GK PR++ Q + +G+ + Sbjct: 5 VEVLVPGGKATAGPPLGPALGPLGINVKAVVDDINKKTA-EFNGMQVPVTVTVDDKKNFTIEVGIPPTTALVMKEAGITKGSTEPGALVA--GDLPLEAAVRIARMKFDGMLSYDLKSAVKEVLGTCVSVGVTVEGKKPREMIQAVNNGEYD 153
BLAST of CB291051 vs. ExPASy Swiss-Prot
Match: RL11_UNCMA (50S ribosomal protein L11P OS=Uncultured methanogenic archaeon RC-I GN=rpl11p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16 Identity = 52/149 (34.90%), Postives = 84/149 (56.38%), Query Frame = -3 Query: 282 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGPVKEILGTCVFVGCTVDGKDPRDLQQEITDG 722 V V V GG+ L P +GPLG++ KK+ ++I +T KD+ G+ V VK+ V +R V V P +ALV+ LK + T N G++T++ I++A++ R ++ L VKE+ GTCV +G ++GK P++ E+ G Sbjct: 5 VEVLVPGGKANPGPPLGPALGPLGINIKKVVDEINNKT-KDYNGMTVPVKVIVDASRNFTVEVGTPPTSALVLSELKLEKGSG--TPNTNFIGSLTIEQAIKVAQMKRDAMLSYTLKNAVKEVAGTCVSLGVMIEGKKPKEFIAEVNAG 150
BLAST of CB291051 vs. ExPASy Swiss-Prot
Match: RL11_METM7 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl11p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16 Identity = 53/157 (33.76%), Postives = 88/157 (56.05%), Query Frame = -3 Query: 273 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGPVKEILGTCVFVGCTVDGKDPRDLQQEITDGDVE 734 QVV++ V +GG+ A L P IGPLG++ ++ + I E KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A +L KE++GTCV VG V+G P++ Q+ + G + Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTDKRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
BLAST of CB291051 vs. ExPASy Swiss-Prot
Match: RL11_METM6 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl11p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16 Identity = 53/157 (33.76%), Postives = 88/157 (56.05%), Query Frame = -3 Query: 273 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGPVKEILGTCVFVGCTVDGKDPRDLQQEITDGDVE 734 QVV++ V +GG+ A L P IGPLG++ ++ + I E KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A +L KE++GTCV VG V+G P++ Q+ + G + Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTDKRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
BLAST of CB291051 vs. ExPASy Swiss-Prot
Match: RL11_METS5 (50S ribosomal protein L11P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl11p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.566e-16 Identity = 59/154 (38.31%), Postives = 82/154 (53.25%), Query Frame = -3 Query: 282 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGPVKEILGTCVFVGCTVDGKDPRDLQQEITDG 722 + V V GG V LAP + LGL+ +GE + K E +KG+ V V L V K V VP+ +L++K P D + K GNI++DDVIE+A +P AK+L G VK ILGT +G TVD KDP+ + +E+ +G Sbjct: 6 IKVVVEGGNVKPGPPLAPTLSQLGLN---VGEVVKKINEATSQFKGMTVPVTLDVDTDTKKYEVSVGVPTTTSLLVKKAGASGPSGDPEHKKI----GNISMDDVIEVAISKKPSLTAKELKGAVKSILGTAKSIGLTVDNKDPKLVVREVEEG 152
BLAST of CB291051 vs. ExPASy Swiss-Prot
Match: RL11_METMP (50S ribosomal protein L11P OS=Methanococcus maripaludis GN=rpl11p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.658e-16 Identity = 55/159 (34.59%), Postives = 91/159 (57.23%), Query Frame = -3 Query: 273 QVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGPVKEILGTCVFVGCTVDGKDPRDLQQEITDGDVE 734 QVV++ V +GG+ A L P IGPLG++ ++ + I T KD++G+ V VK+ V + V +P A+AL+ K + K ++ KH GNIT++ +++IAK+ + +A +L KE++GTCV VG +V+G P + Q+ I G + Sbjct: 4 QVVEILV--SGGKATAGPPLGPAIGPLGVNIMQVVQKINNMT-KDYEGMSVPVKVIVDTDKRTFEVEVGIPPASALIKKEIGI----EKGSQEPKHQVAGNITMEQIVKIAKMKQDAMLAYNLKNASKEVVGTCVSVGISVEGMTPSEAQKAIDAGQFD 155
BLAST of CB291051 vs. ExPASy Swiss-Prot
Match: RL11_METPE (50S ribosomal protein L11P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl11p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.084e-16 Identity = 51/156 (32.69%), Postives = 91/156 (58.33%), Query Frame = -3 Query: 261 VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGPVKEILGTCVFVGCTVDGKDPRDLQQEITDGDVEIPLD 722 V V V GG A + P +GPLG++ K + +DI K+TA ++ G++V VK+ V +++ ++V +P ALV+K + + + I G++ ++ + IA++ ++ +L VKE++GTCV VG TVDGK P+++ I+ G + L+ Sbjct: 5 VEVLVPGGRATAGPPIGPALGPLGINVKAVVDDINKKTA-EFNGMQVPVKIEVDDKKNVTISVGIPPTTALVMKEVGIEKGSAEPNSIIV--GDLPIEAAVRIARMKLDDMLSYELKTAVKEVIGTCVSVGVTVDGKKPKEILAAISAGQYDSVLE 157 The following BLAST results are available for this feature:
BLAST of CB291051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291051 ID=CB291051; Name=CB291051; organism=Citrus sinensis; type=EST; length=781bpback to top |