CB291054

Overview
NameCB291054
Unique NameCB291054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 1.220e-35
Identity = 73/161 (45.34%), Postives = 103/161 (63.98%), Query Frame = -1
Query:  272 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 754
            LMVGLD +GKTTI+ K+   +     PT+GFN++T+ Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ + + EL  +L E+ L  A LL+ ANKQD+       EI   L L ++ + RHW I    A +GEGL EG DWL  +I+S+
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNISSK 180          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.593e-35
Identity = 70/162 (43.21%), Postives = 108/162 (66.67%), Query Frame = -1
Query:  272 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAY-TGEGLLEGFDWLVQDIASR 754
            LM+GLD +GK+T++ K+   D     PT+GFN++TI Y+  ++ +WDVGGQ  IR+ W++Y+  T+ +++VVDS+D  R+D+ K E+D LL +E L G  +LI ANKQD+N     +EIV  LNL ++ K R W +  CSA  +  G+ EGFDW+   + ++
Sbjct:   29 LMIGLDGAGKSTLLYKLKLGDIVSTVPTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSI-KDRKWYVQPCSAIKSPHGIYEGFDWVANSLNNK 189          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARF2_DROME (ADP-ribosylation factor 2 OS=Drosophila melanogaster GN=Arf102F PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.593e-35
Identity = 72/161 (44.72%), Postives = 101/161 (62.73%), Query Frame = -1
Query:  272 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 754
            LMVGLD +GKTTI+ K+   +     PT+GFN++T+ Y+     +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ + + EL N+L+E+ L  A LL+ ANKQD+    T  E+   L L  + + RHW I    A  G GL EG DWL  ++A +
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLRLNQL-RNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFA (ADP-ribosylation factor 1 OS=Plasmodium falciparum GN=ARF1 PE=2 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 2.081e-35
Identity = 69/154 (44.81%), Postives = 101/154 (65.58%), Query Frame = -1
Query:  293 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWL 754
            LMVGLD +GKTTI+ K+   +     PT+GFN++T+ ++  +  +WDVGGQ  IR  WR+Y+  TDGL++VVDS+D  R+DD + EL  ++ EE L  A +L+ ANKQD+    +  E+ + L+L  + + R+W I    A  G+GL EGFDWL
Sbjct:   21 LMVGLDAAGKTTILYKVKLGEVVTTIPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTI-RERNWFIQSTCATRGDGLYEGFDWL 173          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 2.081e-35
Identity = 72/161 (44.72%), Postives = 103/161 (63.98%), Query Frame = -1
Query:  272 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 754
            LMVGLD +GKTTI+ K+   +     PT+GFN++T+ Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ + + EL  +L E+ L  A LL+ ANKQD+       EI   L L ++ + RHW I    A +GEGL EG DWL  ++A++
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNLANK 180          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 2.718e-35
Identity = 73/161 (45.34%), Postives = 103/161 (63.98%), Query Frame = -1
Query:  272 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 754
            LMVGLD +GKTTI+ K+   +     PT+GFN++T+ Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ + + EL  +L E+ L  A LL+ ANKQD+       EI   L L ++ + RHW I    A +GEGL EG +WL  +IAS+
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLEWLSNNIASK 180          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 2.718e-35
Identity = 73/161 (45.34%), Postives = 102/161 (63.35%), Query Frame = -1
Query:  272 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 754
            LMVGLD +GKTTI+ K+   +     PT+GFN++T+ Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ + + EL  +L E+ L  A LL+ ANKQD+       EI   L L ++ + RHW I    A +GEGL EG DWL  +IA +
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARF4_ARATH (Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana GN=At2g15310 PE=2 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 4.636e-35
Identity = 71/161 (44.10%), Postives = 99/161 (61.49%), Query Frame = -1
Query:  272 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 754
            LMVGLD SGKTTI+ K+   +     PT+GFN++T+ Y+     +WD+GGQ  IR  WR+YF+   GL++VVDSSD  RL + + EL  +L +  L GA +L+ ANKQD        E+   L L ++ K R W I G SA +G+GL EG +WL   I ++
Sbjct:   21 LMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIRKLWRHYFQNAQGLIFVVDSSDSERLSEARNELHRILTDNELEGACVLVFANKQDSRNALPVAEVANKLGLHSLSK-RCWLIQGTSAISGQGLYEGLEWLSTTIPNK 180          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARF_DUGJA (ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 7.908e-35
Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = -1
Query:  272 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 754
            LMVGLD +GKTTI+ K+   +     PT+GFN++T+ Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+++ + EL  +L E+ L  A LL+ ANKQD+     P EI   L L ++ + R W I    A +G+GL EG DWL   + +R
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLNEDELRDAVLLVFANKQDLPNAMNPAEITDKLGLHSL-RNRSWYIQATCATSGDGLYEGLDWLSTTLKNR 180          
BLAST of CB291054 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 7.908e-35
Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = -1
Query:  272 LMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGASLLILANKQDINGVFTPTEIVKVLNLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 754
            LMVGLD +GKTTI+ K+   +     PT+GFN++T+ Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+++ + EL  +L E+ L  A LL+ ANKQD+       EI   L L ++ + RHW I    A +GEGL EG DWL   I ++
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNQIRNQ 180          
The following BLAST results are available for this feature:
BLAST of CB291054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
ARF1_SALBA1.220e-3545.34ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 P... [more]
ARFH_DICDI1.593e-3543.21ADP-ribosylation factor H OS=Dictyostelium discoid... [more]
ARF2_DROME1.593e-3544.72ADP-ribosylation factor 2 OS=Drosophila melanogast... [more]
ARF1_PLAFA2.081e-3544.81ADP-ribosylation factor 1 OS=Plasmodium falciparum... [more]
ARF1_CHLRE2.081e-3544.72ADP-ribosylation factor 1 OS=Chlamydomonas reinhar... [more]
ARF_VIGUN2.718e-3545.34ADP-ribosylation factor OS=Vigna unguiculata GN=AR... [more]
ARF2_ARATH2.718e-3545.34ADP-ribosylation factor 2 OS=Arabidopsis thaliana ... [more]
ARF4_ARATH4.636e-3544.10Probable ADP-ribosylation factor At2g15310 OS=Arab... [more]
ARF_DUGJA7.908e-3544.10ADP-ribosylation factor OS=Dugesia japonica PE=2 S... [more]
ARF1_SOLTU7.908e-3544.72ADP-ribosylation factor 1 OS=Solanum tuberosum PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02bb09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02bb09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291054 ID=CB291054; Name=CB291054; organism=Citrus sinensis; type=EST; length=793bp
TTTTTTTTTTTTTTTTTGGGGGAAAAATAATTATTTTTCAATGCATTTGT
TCATAATCTTGCTCTCTGGACAGCCATTTCAGCTGTAAGATGGATCACCA
TCTACCCAACGGGCTCATTCTTGTACAACAGATACAGCTCATGAGCCAAT
CAATCACATGGGCATACATCTCACATGGGTTTGTCCCATAAACCACACTC
TTTTTTTCACATTACAAGGAAAATTTAAAAAATTTTTCTTGTACAACAAC
GGGTTAATCAAGAAGGGAAATCCGGGAGGCAATGTCCTGAACTAACCAAT
CAAATCCCTCTAGCAGTCCCTCACCTGTGTAGGCACTGCAACCCACAATT
TTCCAGTGTCGAGTTTTGTCCATGGCTTCCAAGTTCAGAACTTTAACAAT
CTCTGTTGGGGTAAAAACACCATTGATGTCCTGCTTATTTGCTAAAATCA
GTAAGGATGCCCCTGATAGCCTCTCTTCCTTTAAAAGATTGTCTAGTTCC
ATTTTGCAATCATCCAGTCTTCTAAGATCGGAACTATCAACCACCCACAC
CAAACCATCAGTTTGCTCAAAGTAATTCCTCCAATATGATCTTATAGTCC
TTTGGCCTCCTACATCCCATATGTTTAAAGTGTACTTTTGGTAAGTAATG
GTTTTGATATTGAATCCAAGTGTAGGACTGATAACGCTAGTATCTTCTCC
GTTTATCTTCAAAACAATAGTGGTCTTCCCAGAATTATCAAGACCCACCA
TAAGAATGCGCATTTCCTTCTCTTTTTTCTTGATCTTCCTTAT
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