CB291055

Overview
NameCB291055
Unique NameCB291055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.019e-31
Identity = 70/162 (43.21%), Postives = 102/162 (62.96%), Query Frame = -3
Query:  254 LRVGLDNSGKTTIVLKIN-GEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 736
            L VGLD +GKTTI+ K+  GE  + I  T+GFN++T+ Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+++ + EL   L E+ L  A LL+  NKQD+  A    EI   L L ++ + R+W I    A +G+GL EG DWL   + ++
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSL-RQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.019e-31
Identity = 70/162 (43.21%), Postives = 102/162 (62.96%), Query Frame = -3
Query:  254 LRVGLDNSGKTTIVLKIN-GEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 736
            L VGLD +GKTTI+ K+  GE  + I  T+GFN++T+ Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+++ + EL   L E+ L  A LL+  NKQD+  A    EI   L L ++ + R+W I    A +G+GL EG DWL   + ++
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSL-RQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARF2_BOVIN (ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.019e-31
Identity = 70/162 (43.21%), Postives = 102/162 (62.96%), Query Frame = -3
Query:  254 LRVGLDNSGKTTIVLKIN-GEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 736
            L VGLD +GKTTI+ K+  GE  + I  T+GFN++T+ Y+  +  +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+++ + EL   L E+ L  A LL+  NKQD+  A    EI   L L ++ + R+W I    A +G+GL EG DWL   + ++
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSL-RQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARF_GIALA (ADP-ribosylation factor OS=Giardia lamblia PE=3 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 1.330e-31
Identity = 68/156 (43.59%), Postives = 102/156 (65.38%), Query Frame = -3
Query:  275 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDL--RRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWL 736
            L VGLD +GKTTI+ K+   +      T+GFN++T+ Y+     +WDVGGQ +IR  WR+Y++ TD L++V+DS+DL  +R++D K EL   L E+ L  A+LL+ ANKQD+  A + T++ + L L+ + K R W I    A +G+GL +G DWL
Sbjct:   21 LMVGLDAAGKTTILYKLMLGEVVTTVPTIGFNVETVEYKNINFTVWDVGGQDSIRPLWRHYYQNTDALIYVIDSADLEPKRIEDAKNELHTLLGEDELRDAALLVFANKQDLPKAMSTTDLTERLGLQEL-KKRDWYIQPTCARSGDGLYQGLDWL 175          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.737e-31
Identity = 68/161 (42.24%), Postives = 97/161 (60.25%), Query Frame = -3
Query:  254 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 736
            L VGLD +GKTTI+ K+   +      T+GFN++T+ Y+     +WDVGGQ  IR  WR+YF+ T G+++VVDS+D  R+ + + EL   L E+ L  A LL+ ANKQD+  A    EI   L L ++ + R W I    A TG+GL EG DWL  ++  +
Sbjct:   24 LMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLSSL-RQRSWYIQATCATTGDGLFEGLDWLSTELKKK 183          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.737e-31
Identity = 65/162 (40.12%), Postives = 103/162 (63.58%), Query Frame = -3
Query:  254 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAY-TGEGLLEGFDWLVQDIASR 736
            L +GLD +GK+T++ K+   D      T+GFN++TI Y+  ++ +WDVGGQ  IR+ W++Y+  T+ +++VVDS+D  R+D+ K E+   L +E L G  +LI ANKQD+N A   +EI   L L ++ K R W +  CSA  +  G+ EGFDW+   + ++
Sbjct:   29 LMIGLDGAGKSTLLYKLKLGDIVSTVPTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSI-KDRKWYVQPCSAIKSPHGIYEGFDWVANSLNNK 189          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARF_CANAL (ADP-ribosylation factor OS=Candida albicans GN=ARF1 PE=3 SV=4)

HSP 1 Score: 135.961 bits (341), Expect = 2.269e-31
Identity = 70/159 (44.03%), Postives = 101/159 (63.52%), Query Frame = -3
Query:  263 LRVGLDNSGKTTIVLKIN-GEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDI 736
            L VGLD +GKTTI+ K+  GE  + I  T+GFN++T+ Y+  +  +WDVGGQ  IR  WR YF+ T G+++VVDS+D  R+++ + EL + L E+ L  A LL+LANKQD+  A    EI + + L ++   R W I    A TG+GL EG +WL   +
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVETVEYKNISFTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRINEAREELQSMLNEDELKDAVLLVLANKQDLPNAMNAAEITEKMGLHSI-MNRPWFIQATCATTGDGLYEGLEWLSNQV 177          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARF5_CHICK (ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.269e-31
Identity = 70/162 (43.21%), Postives = 102/162 (62.96%), Query Frame = -3
Query:  254 LRVGLDNSGKTTIVLKIN-GEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 736
            L VGLD +GKTTI+ K+  GE  + I  T+GFN++T+ Y+     +WDVGGQ  IR  WR+YF+ T GL++VVDS+D  R+ +   EL   L+E+ L  A LL+ ANKQD+  A   +E+   L L+A+ ++R W +    A  G GL +G DWL  +++ R
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESAEELQKMLQEDELRDAVLLVFANKQDMPNAMVVSELTDKLGLQAL-RSRTWYVQATCATQGTGLYDGLDWLSHELSKR 180          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARL1_CAEEL (ADP-ribosylation factor-like protein 1 OS=Caenorhabditis elegans GN=arl-1 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.963e-31
Identity = 68/161 (42.24%), Postives = 99/161 (61.49%), Query Frame = -3
Query:  254 LRVGLDNSGKTTIVLKINGEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 736
            L +GLD +GKTTI+ ++   +      T+GFN++ + Y+     +WD+GGQ +IR YWR Y+  TD +++VVDS+D  R+   + ELA  L+E+ L GA L +LANKQDI G  T TE+ K L L+A+ + R  +I   SA  GEGL    DWL   +  +
Sbjct:   20 LILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQEDELQGAVLAVLANKQDIAGCLTETEVYKALGLDAL-RNRTIQIFKTSASKGEGLDPAMDWLANQLQQK 179          
BLAST of CB291055 vs. ExPASy Swiss-Prot
Match: ARF_CRYNE (ADP-ribosylation factor OS=Cryptococcus neoformans GN=ARF PE=1 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 3.870e-31
Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = -3
Query:  275 LRVGLDNSGKTTIVLKIN-GEDTSVISLTLGFNIKTITYQKSTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELANFLKEERLSGASLLILANKQDINGAFTPTEIAKVLTLEAMDKTRHWKIVGCSAYTGEGLLEGFDWL 736
            L VGLD +GKTTI+ K+  GE  + I  T+GFN++T+ Y+  +  +WDVGGQ  IR  WR+YF+ T G+++VVDS+D  R+ + + EL   L E+ L  A LL+ ANKQD+  A    EI   L L ++ + R W I    A +G+GL EG +WL
Sbjct:   21 LMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRSWYIQAACATSGDGLYEGLEWL 173          
The following BLAST results are available for this feature:
BLAST of CB291055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF2_RAT1.019e-3143.21ADP-ribosylation factor 2 OS=Rattus norvegicus GN=... [more]
ARF2_MOUSE1.019e-3143.21ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 ... [more]
ARF2_BOVIN1.019e-3143.21ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE... [more]
ARF_GIALA1.330e-3143.59ADP-ribosylation factor OS=Giardia lamblia PE=3 SV... [more]
ARF_NEUCR1.737e-3142.24ADP-ribosylation factor OS=Neurospora crassa GN=NC... [more]
ARFH_DICDI1.737e-3140.12ADP-ribosylation factor H OS=Dictyostelium discoid... [more]
ARF_CANAL2.269e-3144.03ADP-ribosylation factor OS=Candida albicans GN=ARF... [more]
ARF5_CHICK2.269e-3143.21ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5... [more]
ARL1_CAEEL2.963e-3142.24ADP-ribosylation factor-like protein 1 OS=Caenorha... [more]
ARF_CRYNE3.870e-3144.52ADP-ribosylation factor OS=Cryptococcus neoformans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02bb09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02bb09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291055 ID=CB291055; Name=CB291055; organism=Citrus sinensis; type=EST; length=774bp
GGGGAAAAATAATTACTTTTCAATGCATTTGTTCATAATCTTGCTCTCTG
GACAGCCATTTCAGCTGTAAGATGGATCACCATCTACCCAACGGGCTCAT
TCTTGTACAACAGATACAGCTCATGAGCCAATCAATCACATGGGCATACA
TCTCACATGGTTTTGTCCCATAAACCACACTCTTTTTTTCACATTACAAG
GAAAATTTAAAAAATTTTTCTTGTACAACAACGGGTTAATCAAGAAGGTA
GATCCGGGAGGCAATGTCCTGAACTAACCAATCAAATCCCTCTAGCAGTC
CCTCACCTGTGTAGGCACTGCAACCCACAATTTTCCAGTGTCGAGTTTTG
TCCATGGCTTCCAAGGTCAGAACTTTAGCAATCTCTGTTGGGGTAAAAGC
ACCATTGATGTCCTGCTTATTTGCTAAAATCAATAAGGATGCCCCTGATA
GCCTCTCTTCCTTTAAAAAATTGGCTAATTCCATTTTGCAATCATCCAGT
CTTCTAAGATCGGAACTATCAACCACCCACACCAAACCATCAGTTTGCTC
AAAGTAATTCCTCCAATATGATCTTATAGTCCTTTGGCCTCCTACATCCC
ATATGTTTAAAGTGGACTTTTGGTAAGTAATGGTTTTGATATTGAATCCC
AGGGTAAGACTGATAACGCTAGTATCTTCTCCGTTTATCTTCAAAACAAT
AGTGGTCTTCCCAGAATTATCAAGACCCACCCTAAGAATGCGCATTTCCT
TCTCTTTTTTCTTGATCTTCCTTA
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