CB291065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291065 vs. ExPASy Swiss-Prot
Match: KATL2_HUMAN (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens GN=KATNAL2 PE=2 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 4.074e-20 Identity = 58/149 (38.93%), Postives = 93/149 (62.42%), Query Frame = -1 Query: 491 EKYVKAVFSLASKIAPSVVFVDEVDSMLGRR--ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE------ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCP 913 EK V+ +F LA APS +F+DE++S++ +R + GEHE +MK E +V DGL + ++ V VLAA+N P++LD A++RRL +R++V+LP R+ +I L EL ++++ ++ +GYSGSD+K +C AA P Sbjct: 332 EKLVRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGL-ARSEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSREARQAMIYHWLPPVSKSRALELHTELEYSVLSQETEGYSGSDIKLVCREAAMRP 479
BLAST of CB291065 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19 Identity = 54/140 (38.57%), Postives = 82/140 (58.57%), Query Frame = -1 Query: 500 EKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 913 EK ++ F A ++AP+V+F DE+DS+ R G + ++ N+ + DGL ++ E V+V+AATNRP +D A++R R R + V P RE+I+++ LA+DV L +A ADGY GSDL N+ AA Sbjct: 541 EKAIRQTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGL--EEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAA 678 HSP 2 Score: 77.0258 bits (188), Expect = 1.658e-13 Identity = 61/212 (28.77%), Postives = 109/212 (51.42%), Query Frame = -1 Query: 287 EKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN-PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPXXXXXXXXXXXXXXXXXENRASPPLYSSVDVRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNELYG 913 E+ ++ +F A +PS++F+DE+DS+ +RE+ GE E R++ + + DGL + + +V+V+AATNR +D A+ R R R + + +PD RE+I+++ L+ DV+L +A+ G+ G+D+++L AA + PP S +D +K +DFK A +V S E + W+++ G Sbjct: 268 EQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTGEVE--RRVVAQLLTMMDGL--EGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAA-------MRALRRYLPEIDLDEEDIPP--SLIDRMIVKREDFKGALSEVEPSAMREVLVELPKITWDDVGG 466
BLAST of CB291065 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 2.022e-19 Identity = 52/131 (39.69%), Postives = 81/131 (61.83%), Query Frame = -1 Query: 524 EKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVIL-AKEELASDVDLEGIANMADGYSGSDL 913 EK VK +F LA + PS++F+DE+DS+ G R E EA R++K EF+V G+ D + +LVL ATN P+ LD A+ RR +R+ + LP+A R + R+ L + + ++ D + + DGYSG+D+ Sbjct: 213 EKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMQGVGV-DNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADI 341
BLAST of CB291065 vs. ExPASy Swiss-Prot
Match: KATL2_MOUSE (Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus GN=Katnal2 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 2.022e-19 Identity = 58/149 (38.93%), Postives = 91/149 (61.07%), Query Frame = -1 Query: 491 EKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP--GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE------ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCP 913 EK V+ +F LA APS +F+DE++S++ +R GEHE +MK E +V DGL + ++ V VLAA+N P++LD A++RRL +R++V+LP R+ +I L EL + ++ ++ +GYSGSD+K +C AA P Sbjct: 333 EKLVRVLFELARYHAPSTIFLDELESVMSQRGMVPGGEHEGSLRMKTELLVQMDGL-ARSEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSQEARQAMIYHWLPPVSKNHALELHTQLEYSVLSQETEGYSGSDIKLVCREAAMRP 480
BLAST of CB291065 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.641e-19 Identity = 57/141 (40.43%), Postives = 85/141 (60.28%), Query Frame = -1 Query: 500 GEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 916 G + V+ +FS A K +P ++F+DE+D++ G R NP + + M+ N+ +V DG K E ++V+AATN P LD+A+VR R R ++V PD R +I+ ++K A DVDL IA G+SG+DL NL AA Sbjct: 304 GARRVRDLFSAAKKCSPCIIFIDEIDAIGGSR-NPKDQQYMKMTLNQMLVELDGF--KQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAA 441
BLAST of CB291065 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.504e-19 Identity = 50/136 (36.76%), Postives = 86/136 (63.24%), Query Frame = -1 Query: 512 EKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLC 913 EK+V+ +F A ++AP V+F DE+DS+ RR G+ ++ ++ + DGL ++ + V+V+AATNRP +D A++R RL R + + PD R +I ++ L + LA DV++E +A +GYSG+D++ +C Sbjct: 534 EKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGL--EELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVC 667 HSP 2 Score: 92.8189 bits (229), Expect = 2.920e-18 Identity = 54/141 (38.30%), Postives = 87/141 (61.70%), Query Frame = -1 Query: 500 EKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN-PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 913 E+ ++ +F A + APS++F+DE+DS+ +RE GE E R++ + + DGL + V+V+AATNRP +D A+ R R R + + +PD R++I+ + K LA DVDLE +A + +G+ G+DL+ LC AA Sbjct: 261 EQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVE--RRVVAQLLALMDGLEARGD--VIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAA 397
BLAST of CB291065 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.883e-19 Identity = 56/144 (38.89%), Postives = 87/144 (60.42%), Query Frame = -1 Query: 500 GEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPG---EHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 916 G V+ +F A K AP ++F+DE+D++ GR+ G H+ + N+ +V DG + E ++V+AATNRP LD A++R R R+++V LPD RE+I++V + + LA+D+D IA G+SG+DL NL AA Sbjct: 229 GASRVRDMFEQAKKAAPCIIFIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGF--EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAA 369
BLAST of CB291065 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.883e-19 Identity = 56/144 (38.89%), Postives = 87/144 (60.42%), Query Frame = -1 Query: 500 GEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPG---EHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 916 G V+ +F A K AP ++F+DE+D++ GR+ G H+ + N+ +V DG + E ++V+AATNRP LD A++R R R+++V LPD RE+I++V + + LA+D+D IA G+SG+DL NL AA Sbjct: 229 GASRVRDMFEQAKKAAPCIIFIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGF--EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAA 369
BLAST of CB291065 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.683e-19 Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = -1 Query: 500 GEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPG---EHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 916 G V+ +F A K AP ++F+DE+D++ GR+ G H+ + N+ +V DG D V+V+AATNRP LD A+ R R R+++V LPD RE+I++V + K +A DVD +A GYSG+DL NL AA Sbjct: 228 GASRVRDMFEQAKKNAPCLIFIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDG--VIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAA 368
BLAST of CB291065 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.003e-18 Identity = 56/144 (38.89%), Postives = 86/144 (59.72%), Query Frame = -1 Query: 500 GEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPG---EHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAA 916 G V+ +F A K AP ++F+DE+D++ GR+ G H+ + N+ +V DG + E ++V+AATNRP LD A++R R R+++V LPD RE+I++V + + LA D+D IA G+SG+DL NL AA Sbjct: 229 GASRVRDMFEQAKKAAPCIIFIDEIDAV-GRQRGAGLGGGHDEREQTLNQMLVEMDGF--EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA 369 The following BLAST results are available for this feature:
BLAST of CB291065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 300
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB291065 ID=CB291065; Name=CB291065; organism=Citrus sinensis; type=EST; length=916bpback to top |