CB291113

Overview
NameCB291113
Unique NameCB291113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11
Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = -1
Query:  304 KFFNAVAAEDLIVKGG--RVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQ 690
            K  + V  +D+I +    RV GV   W    M       +DP  + AK VV   GHD    +   +++  +G++  +PG K+     AE++ V    +V  G+    M V E+ G PRMGP FG M++SG+
Sbjct:  125 KIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYATGMAVTEVKGLPRMGPIFGAMVLSGK 250          
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11
Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = -1
Query:  304 KFFNAVAAEDLIVKGG--RVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQ 690
            K  + V  +D+I +    RV GV   W    M       +DP  + AK VV   GHD    +   +++  +G++  +PG K+     AE++ V    +V  G+    M V E+ G PRMGP FG M++SG+
Sbjct:  125 KIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGK 250          
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11
Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = -1
Query:  304 KFFNAVAAEDLIVKGG--RVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQ 690
            K  + V  +D+I +    RV GV   W    M       +DP  + AK VV   GHD    +   +++  +G++  +PG K+     AE++ V    +V  G+    M V E+ G PRMGP FG M++SG+
Sbjct:  125 KIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGK 250          
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11
Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = -1
Query:  304 KFFNAVAAEDLIVKGG--RVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQ 690
            K  + V  +D+I +    RV GV   W    M       +DP  + AK VV   GHD    +   +++  +G++  +PG K+     AE++ V    +V  G+    M V E+ G PRMGP FG M++SG+
Sbjct:  125 KIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGK 250          
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_SULIK (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1717 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11
Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = -1
Query:  304 KFFNAVAAEDLIVKGG--RVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQ 690
            K  + V  +D+I +    RV GV   W    M       +DP  + AK VV   GHD    +   +++  +G++  +PG K+     AE++ V    +V  G+    M V E+ G PRMGP FG M++SG+
Sbjct:  125 KIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGK 250          
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_SULIA (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1786 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11
Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = -1
Query:  304 KFFNAVAAEDLIVKGG--RVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQ 690
            K  + V  +D+I +    RV GV   W    M       +DP  + AK VV   GHD    +   +++  +G++  +PG K+     AE++ V    +V  G+    M V E+ G PRMGP FG M++SG+
Sbjct:  125 KIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGK 250          
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_NATPD (Putative thiazole biosynthetic enzyme OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=NP5174A PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.363e-11
Identity = 48/153 (31.37%), Postives = 71/153 (46.41%), Query Frame = -1
Query:  304 KFFNAVAAEDLIVKGG-RVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHD----------GPFGAPGVKRL--KSIGMIE-----------EVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQ 690
            K  N     D++++   RVGG+V NW  V   P   +C+DP  +EA +V+   GHD          G   APG++     + GM +           + PG  ++ +  +ED  V        G+IV  M  A   G PRMGP FG M++SG+
Sbjct:  129 KMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVEADLVIDATGHDAVAVSKLQERGVLNAPGIEHADEHNTGMDQTGDDSYGAPGHDSPGHDSMWVGQSEDAVVEHTGLAHEGLIVTGMATATTYGLPRMGPTFGAMLLSGK 281          
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11
Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = -1
Query:  304 KFFNAVAAEDLIVK-GGRVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEE-VPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQ 690
            +  N V+ ED++++ G R+ G+V NW    M       +DP  + A+VV+   GHD        K++    + E  V G K +     E + V   REV PG+IV  M    +   PRMGP FG M++SG+
Sbjct:  120 ELINLVSVEDVMIREGDRIVGLVINWTAADM---AGIHVDPLAIRARVVIDGTGHDAAVCRVVQKKIPGAIVGESGVIGEKPMWAALGEKIVVDATREVYPGLIVAGMAATTVAAGPRMGPIFGGMLLSGE 247          
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_HALMA (Putative thiazole biosynthetic enzyme OS=Haloarcula marismortui GN=rrnAC1782 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11
Identity = 47/151 (31.13%), Postives = 72/151 (47.68%), Query Frame = -1
Query:  304 KFFNAVAAEDLIVKGG-RVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHD----------GPFGAPGVKRLKSIGMIE-----------EVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQ 690
            K  N     D++++   RVGG+V NW  V   P   +C+DP  +EA +V+   GHD          G   APG++  ++ GM +           + PG  ++ +  +ED  V        G++V  M  A   G PRMGP FG M++SG+
Sbjct:  132 KMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVEADLVIDATGHDAMAVKKLDERGVLNAPGLED-EASGMDQTDDDTYGAPGHDSPGHDSMWVGESEDAVVEHTGLAHDGLVVTGMATATTYGLPRMGPTFGAMLVSGK 281          
BLAST of CB291113 vs. ExPASy Swiss-Prot
Match: THI4_SULTO (Putative thiazole biosynthetic enzyme OS=Sulfolobus tokodaii GN=ST0361 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11
Identity = 45/144 (31.25%), Postives = 69/144 (47.92%), Query Frame = -1
Query:  304 MSKLLARP---NVKFFNAVAAEDLIVKGG--RVGGVVTNWALVSMNPDPQSCMDPNVMEAKVVVSFCGHDGPFGAPGVKRLKSIGMIEEVPGMKALAMNFAEDVFVRLPREVVPGMIVPAMEVAEIDGAPRMGPPFGPMMISGQ 720
            M+KL A       K  + V  +D+I +    +V GV   W    M       +DP  + AK VV   GHD    +   +++  + ++  +PG K+     AE++ V     V PG+    M V E+ G PRMGP FG M++SG+
Sbjct:  115 MAKLAASAIDAGAKIIHGVTVDDVIFRENPLKVVGVAVEWTATQM---AGLHVDPLFISAKAVVDATGHDAEVISVAARKIPELNIV--IPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPRMGPIFGAMVLSGK 253          
The following BLAST results are available for this feature:
BLAST of CB291113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
THI4_SULSO1.363e-1132.06Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIY1.363e-1132.06Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIM1.363e-1132.06Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIL1.363e-1132.06Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIK1.363e-1132.06Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIA1.363e-1132.06Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_NATPD1.363e-1131.37Putative thiazole biosynthetic enzyme OS=Natronomo... [more]
THI4_METTP1.780e-1133.59Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_HALMA1.780e-1131.13Putative thiazole biosynthetic enzyme OS=Haloarcul... [more]
THI4_SULTO3.035e-1131.25Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02be10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02be10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291113 ID=CB291113; Name=CB291113; organism=Citrus sinensis; type=EST; length=720bp
TTTTTTTTTTTTTTTTTCTTTTGGACCGGAAACAAACACTTTATTCACAA
AACCTCACAACATTATCTCATTATTCGCATCAACCATCCATCACAACCAC
CTAAATACAACTACTTTTTTGCCAAAGTTTATTTGCATGCACCCAGCTGA
TGAGTGATGATGCCTGGTATTACCAAATTAAGCATCAGCAGTCTCAACAA
AATCAGCTGCAGCTAAAATCAGCTCAGGGGGAACGCCCCCCACATATGTA
CCGTCTAATGCATTCGGGTGGGCCAGGGACTTCAACGCCAAATGGGCAGC
CTTCTGCCCCGAAATCATCATTGGTCCAAATGGTGGCCCCATTCGAGGAG
CACCATCAATCTCGGCAACTTCCATGGCGGGAACTATCATACCAGGCACA
ACCTCCCTGGGCAGCCTCACAAAAACATCTTCTGCAAAGTTCATGGCCAG
GGCCTTCATTCCAGGCACTTCCTCAATCATTCCGATACTCTTCAACCTCT
TTACTCCAGGGGCCCCAAAAGGCCCATCATGGCCACAAAAGCTCACAACC
ACCTTCGCTTCCATTACATTGGGATCCATGCAAGACTGGGGATCGGGATT
CATTGACACCAACGCCCAGTTGGTCACCACACCACCAACTCTGCCGCCTT
TGACTATCAAGTCCTCGGCTGCCACTGCATTAAAAAACTTGACGTTGGGG
CGGGCCAGGAGCTTGCTCAT
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