CB304393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P_RAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 1.815e-33 Identity = 71/106 (66.98%), Postives = 82/106 (77.36%), Query Frame = -3 Query: 334 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 651 GMAFRVPT +VSVVDLT RLEK A YD+IK +K +EG LKGILGYTED VVS DF +S SS F A AGI L+ FVKL+SWYDNE+GYS RVVDL+ +MA + Sbjct: 228 GMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQAAEGPLKGILGYTEDQVVSCDFNSNSHSSTFDAGAGIALNDNFVKLISWYDNEYGYSNRVVDLMAYMASKE 333
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P_PONAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo abelii GN=GAPDH PE=2 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 2.371e-33 Identity = 71/106 (66.98%), Postives = 81/106 (76.42%), Query Frame = -3 Query: 334 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 651 GMAFRVPT +VSVVDLT RLEK A YD+IK +K SEG LKGILGYTE VVS+D D+ SS F A AGI L+ FVKL+SWYDNE+GYS RVVDL+ HMA + Sbjct: 230 GMAFRVPTANVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDLNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE 335
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.371e-33 Identity = 70/102 (68.63%), Postives = 83/102 (81.37%), Query Frame = -3 Query: 346 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHM 651 GMAFRVPT DVSVVDLT RL + A Y IK A+KA ++G + GIL YTED+VVSTDF+GD+ SSIF AKAGI L+ FVKL+SWYDNE+GYS RVVDL+ +M Sbjct: 302 GMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRYM 403
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P4_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 4 OS=Caenorhabditis elegans GN=gpd-4 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.371e-33 Identity = 73/103 (70.87%), Postives = 82/103 (79.61%), Query Frame = -3 Query: 343 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 651 GMAFRVPT DVSVVDLTVRLEK AS D+IK +KA ++G +KGIL YTED VVSTDFV D SSIF A I L+ FVKLVSWYDNE+GYS RVVDLI ++A Sbjct: 236 GMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDFVSDPHSSIFDTGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIA 338
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P_ERYGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Erysiphe graminis subsp. hordei GN=GPD PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.096e-33 Identity = 68/103 (66.02%), Postives = 84/103 (81.55%), Query Frame = -3 Query: 343 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 651 GMA RVPT +VSVVDLT R+EK A+YDEIK AIK + +L+GIL YTED++VSTD +G++ SSIF AKAGI L+ FVKLV+WYDNEW YS RV+DLI ++A Sbjct: 230 GMAMRVPTANVSVVDLTCRIEKSATYDEIKKAIKIAAGNELQGILSYTEDEIVSTDLIGNNHSSIFDAKAGISLNDNFVKLVAWYDNEWAYSRRVIDLISYIA 332
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3PA_GUITH (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Guillardia theta GN=GAPC1 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.096e-33 Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = -3 Query: 340 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 651 GMAFRVPT+DVSVVDLT RL KDA+Y+EI A +K + G +KG LGYT++ +VSTDF + SS F A+AGI L+ +FVKLV+WYDNEWGYS RV DL+VH+AK Sbjct: 276 GMAFRVPTIDVSVVDLTCRLAKDATYEEICAEVKRRANGDMKGFLGYTDEPLVSTDFETEPISSTFDAEAGISLNPRFVKLVAWYDNEWGYSNRVKDLMVHVAK 379
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.282e-33 Identity = 73/104 (70.19%), Postives = 84/104 (80.77%), Query Frame = -3 Query: 343 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEG-KLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 651 GM+FRVPT DVSVVDL R+EK ASY+EIK IK SE +LKGILGYTED VVSTDF+G + SSIF A+AGI L+ FVKLVSWYDNE+GYS RV DLI ++A Sbjct: 229 GMSFRVPTSDVSVVDLVCRIEKGASYEEIKNVIKKASESPELKGILGYTEDAVVSTDFIGSTESSIFDAQAGIALNANFVKLVSWYDNEYGYSRRVCDLISYIA 332
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3PT_RAT (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.282e-33 Identity = 72/102 (70.59%), Postives = 82/102 (80.39%), Query Frame = -3 Query: 346 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHM 651 GMAFRVPT +VSVVDLT RL + ASY IK A+KA ++G + GIL YTED VVSTDF GDS SSIF AKAGI L+ FVKLVSWYDNE+GYS RVVDL+ +M Sbjct: 326 GMAFRVPTPNVSVVDLTCRLAQPASYTAIKEAVKAAAKGPMAGILAYTEDQVVSTDFNGDSHSSIFDAKAGIALNDNFVKLVSWYDNEYGYSHRVVDLLRYM 427
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P_PHARH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaffia rhodozyma GN=GPD PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.898e-33 Identity = 72/104 (69.23%), Postives = 82/104 (78.85%), Query Frame = -3 Query: 343 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEG-KLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 651 GMAFRVPT DVSVVDL VR+EK ASY+EIK IK S+ +LKGIL YT+D VVSTDF GDS SS F A+ GI L+ FVKLVSWYDNEWGYS RV DL+ ++A Sbjct: 229 GMAFRVPTPDVSVVDLVVRIEKGASYEEIKETIKKASQTPELKGILNYTDDQVVSTDFTGDSASSTFDAQGGISLNGNFVKLVSWYDNEWGYSARVCDLVSYIA 332
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P1_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agaricus bisporus GN=gpd1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.898e-33 Identity = 68/108 (62.96%), Postives = 88/108 (81.48%), Query Frame = -3 Query: 340 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKL----KGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 651 G+AFRVPT+DVSVVDL VRLEK+ SYD++K A++ ++GK KGI+ YTE+DVVSTDFVG + S IF AKAGI L+ +F+KLV+WYDNEWGY+ RV D +V++AK Sbjct: 228 GLAFRVPTLDVSVVDLVVRLEKETSYDDVKKAMRDAADGKHPGIEKGIVDYTEEDVVSTDFVGSNYSMIFDAKAGIALNSRFMKLVAWYDNEWGYARRVCDEVVYVAK 335 The following BLAST results are available for this feature:
BLAST of CB304393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304393 ID=CB304393; Name=CB304393; organism=Citrus sinensis; type=EST; length=653bpback to top |