CB304393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P2_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain N315) GN=gapA2 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.396e-17 Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = -3 Query: 358 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDL 651 GMA RVPT +VS+VDL V LEK+ + +E+ A E+ G L+GI+ +VS DF + S+I AK+ +V+S VK+++WYDNEWGYS RVVD+ Sbjct: 230 GMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAF--ENAG-LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDV 324
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P2_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA2 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.396e-17 Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = -3 Query: 358 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDL 651 GMA RVPT +VS+VDL V LEK+ + +E+ A E+ G L+GI+ +VS DF + S+I AK+ +V+S VK+++WYDNEWGYS RVVD+ Sbjct: 230 GMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAF--ENAG-LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDV 324
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P2_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain COL) GN=gapA2 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.396e-17 Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = -3 Query: 358 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDL 651 GMA RVPT +VS+VDL V LEK+ + +E+ A E+ G L+GI+ +VS DF + S+I AK+ +V+S VK+++WYDNEWGYS RVVD+ Sbjct: 230 GMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAF--ENAG-LEGIIEVEHQPLVSVDFNTNPNSAIIDAKSTMVMSGNKVKVIAWYDNEWGYSNRVVDV 324
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.824e-17 Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = -3 Query: 358 GMAFRVPTVDVSVVDLTVRL-EKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDL 651 G+A RVPT +VSVVDL V + +K + +++ AA + ++G LKG+L ++ +VS DF SS + +V+ VK+V+WYDNEWGYS RVVDL Sbjct: 285 GIALRVPTPNVSVVDLVVNVAKKGITAEDVNAAFRKAADGPLKGVLAVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 383
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.111e-17 Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = -3 Query: 358 GMAFRVPTVDVSVVDLTVRL-EKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDL 651 G+A RVPT +VSVVDL V + +K S +++ AA + +EG LKGIL + +VS DF S+ + +V+ VK+V+WYDNEWGYS RVVDL Sbjct: 316 GIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGILDVCDVPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 414
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.111e-17 Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = -3 Query: 358 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDL 648 + RVPT +VSVVDL V++ K +E+ AA + ++ +LKGIL ++ +VS DF SS A +V+ VK+++WYDNEWGYS RVVDL Sbjct: 287 LPLRVPTPNVSVVDLVVQVSKKTFAEEVNAAFREAADKELKGILDVCDEPLVSVDFRCSDVSSTVDASLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 383
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_SHEFN (D-erythrose-4-phosphate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=epd PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.111e-17 Identity = 42/105 (40.00%), Postives = 67/105 (63.81%), Query Frame = -3 Query: 334 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 648 ++ RVPT++V+ +DL+V LEK + ++I + ++ S G GILGYT++ +VS DF D RSSI V + VKL+ W DNEWG++ R++D + M + + Sbjct: 232 ISVRVPTINVTAIDLSVTLEKKVNIEQINSVLQRASNGSFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGHLVKLLLWCDNEWGFANRMLDTSLAMIQAK 336
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P_CAVPO (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Cavia porcellus GN=GAPDH PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17 Identity = 44/61 (72.13%), Postives = 48/61 (78.69%), Query Frame = -3 Query: 469 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDS 651 GMAFRVPT +VSVVDLT RLEK A YD+IK +K SEG LKGILGYTED VVS DF D+ Sbjct: 62 GMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQASEGSLKGILGYTEDQVVSCDFNSDT 122
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P3_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap3 PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = -3 Query: 358 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESE-GKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDL 651 G+A RVP ++ S+ D + + + +EI A +KA SE L+GILGY E +VS D+ D RSSI A + +V+ + VK+++WYDNEWGY R+V+L Sbjct: 230 GIAVRVPLLNASLTDCVFEVNRPTTVEEINALLKAASEQAPLQGILGYEERPLVSIDYKDDPRSSIIDALSTMVVDETQVKILAWYDNEWGYVNRMVEL 328
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P3_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena sp. (strain PCC 7120) GN=gap3 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.930e-17 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = -3 Query: 358 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESE-GKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDL 651 G+A RVP ++ S+ D + + + +EI A +KA SE L+GILGY E +VS D+ D RSSI A + +V+ + VK+++WYDNEWGY R+V+L Sbjct: 230 GIAVRVPLLNASLTDCVFEVTRPTTVEEINALLKAASEQAPLQGILGYEERPLVSIDYKDDPRSSIIDALSTMVVDETQVKILAWYDNEWGYVNRMVEL 328 The following BLAST results are available for this feature:
BLAST of CB304393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304393 ID=CB304393; Name=CB304393; organism=Citrus sinensis; type=EST; length=653bpback to top |