CB304393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_VIBVU (D-erythrose-4-phosphate dehydrogenase OS=Vibrio vulnificus GN=epd PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.929e-13 Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = -3 Query: 334 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 648 ++ RVPTV+V+ +DL+V + + +++ I S+ L+GI+ YTE +VS DF D S+I V + VK++ W DNEWG++ R++D + M Q Sbjct: 242 ISVRVPTVNVTAMDLSVTINTNVKVNDVNQTIVNASQCTLRGIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTALAMQAAQ 346
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_ECOK1 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=epd PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.929e-13 Identity = 35/102 (34.31%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 343 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 648 +A RVPT++V+ +DL+V ++K +E+ ++ ++G GI+ Y E +VS DF D S+I V +K + W DNEWG++ R++D + MA Sbjct: 233 IAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYAELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA 334
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_ECO45 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=epd PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.929e-13 Identity = 35/102 (34.31%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 343 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 648 +A RVPT++V+ +DL+V ++K +E+ ++ ++G GI+ Y E +VS DF D S+I V +K + W DNEWG++ R++D + MA Sbjct: 233 IAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYAELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA 334
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P1_STAES (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.036e-12 Identity = 41/108 (37.96%), Postives = 67/108 (62.04%), Query Frame = -3 Query: 340 GMAFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLS---KKFVKLVSWYDNEWGYSTRVVDLIVHMAK 651 G A RVP S+ +LTV L+K D + D++ +A+K S+ GYTED++VS+D VG + S+F A V++ ++ VK+ +WYDNE Y+ ++V + H+A+ Sbjct: 230 GGAQRVPVATGSLTELTVVLDKQDVTVDQVNSAMKQASDESF----GYTEDEIVSSDIVGMTYGSLFDATQTRVMTVGDRQLVKVAAWYDNEMSYTAQLVRTLAHLAE 333
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P1_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.036e-12 Identity = 41/108 (37.96%), Postives = 67/108 (62.04%), Query Frame = -3 Query: 340 GMAFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLS---KKFVKLVSWYDNEWGYSTRVVDLIVHMAK 651 G A RVP S+ +LTV L+K D + D++ +A+K S+ GYTED++VS+D VG + S+F A V++ ++ VK+ +WYDNE Y+ ++V + H+A+ Sbjct: 230 GGAQRVPVATGSLTELTVVLDKQDVTVDQVNSAMKQASDESF----GYTEDEIVSSDIVGMTYGSLFDATQTRVMTVGDRQLVKVAAWYDNEMSYTAQLVRTLAHLAE 333
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_VIBVY (D-erythrose-4-phosphate dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=epd PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.766e-12 Identity = 36/101 (35.64%), Postives = 60/101 (59.41%), Query Frame = -3 Query: 346 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHM 648 ++ RVPTV+V+ +DL+V + + +++ I S+ L+GI+ YTE +VS DF D S+I V + VK++ W DNEWG++ R++D + M Sbjct: 242 ISVRVPTVNVTAMDLSVTINTNVKVNDVNQTIVNASQCTLRGIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTALAM 342
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_PHOLL (D-erythrose-4-phosphate dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=epd PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.766e-12 Identity = 34/102 (33.33%), Postives = 61/102 (59.80%), Query Frame = -3 Query: 343 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 648 ++ RVPT++V+ +DL+V ++ + ++I ++ + +GI+ YTE +VSTDF D S+I V + +K + W DNEWG++ R++D + MA Sbjct: 233 ISVRVPTINVTAIDLSVTVKSSVTVNKINELMQKSAATSFRGIVDYTELPLVSTDFNHDPHSAIVDGTQTRVSGQHLIKTLVWCDNEWGFANRMLDTTLAMA 334
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_TOLAT (D-erythrose-4-phosphate dehydrogenase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=epd PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.013e-12 Identity = 34/103 (33.01%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 340 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 648 ++ RVPT++V+ +DL+V + S ++ ++ ++G + I+ YTE +VS DF D S+I V K +K + W DNEWG++ R++D + MA+ Sbjct: 233 ISVRVPTINVTAIDLSVTVTNAVSVLDVNTMLQRAAKGDFRSIVDYTELPLVSIDFNHDPHSAIVDGTQTRVSGKHLIKTLVWCDNEWGFANRMLDTTLMMAR 335
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_VIBPA (D-erythrose-4-phosphate dehydrogenase OS=Vibrio parahaemolyticus GN=epd PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.935e-12 Identity = 35/101 (34.65%), Postives = 60/101 (59.41%), Query Frame = -3 Query: 346 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHM 648 ++ RVPTV+V+ +DL+V + + +++ I S+ L+ I+ YTE +VS DF D S+I V + + VK++ W DNEWG++ R++D + M Sbjct: 237 ISVRVPTVNVTAMDLSVTINTNVKVNDVNQTIVNASQCTLRNIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSNGQLVKMLVWCDNEWGFANRMLDTALAM 337
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_VIBHB (D-erythrose-4-phosphate dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=epd PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.140e-12 Identity = 35/101 (34.65%), Postives = 60/101 (59.41%), Query Frame = -3 Query: 346 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHM 648 ++ RVPTV+V+ +DL+V + + +++ I S+ L+ I+ YTE +VS DF D S+I V + + VK++ W DNEWG++ R++D + M Sbjct: 237 ISVRVPTVNVTAMDLSVTISTNVKVNDVNQTIVNASQCTLRDIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSNGQLVKMLVWCDNEWGFANRMLDTALAM 337 The following BLAST results are available for this feature:
BLAST of CB304393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304393 ID=CB304393; Name=CB304393; organism=Citrus sinensis; type=EST; length=653bpback to top |