CB304393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_VIBFM (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=epd PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.140e-12 Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = -3 Query: 340 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 648 ++ RVPTV+V+ +DL+V + + ++I I S L I+ YTE +VS DF D S+I V + VK++ W DNEWG++ R++D + M+K Sbjct: 237 ISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTALAMSK 339
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_VIBF1 (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=epd PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.140e-12 Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = -3 Query: 340 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 648 ++ RVPTV+V+ +DL+V + + ++I I S L I+ YTE +VS DF D S+I V + VK++ W DNEWG++ R++D + M+K Sbjct: 237 ISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTALAMSK 339
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_ALISL (D-erythrose-4-phosphate dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=epd PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12 Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = -3 Query: 340 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 648 ++ RVPTV+V+ +DL+V + + ++I I S+ L I+ YTE +VS DF D S+I V + VK++ W DNEWG++ R++D + M K Sbjct: 237 ISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASQCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTALVMKK 339
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P_CLOPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium pasteurianum GN=gap PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11 Identity = 44/107 (41.12%), Postives = 61/107 (57.01%), Query Frame = -3 Query: 340 GMAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGA---KAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 651 G A RVP SV +L L+K+ + +EI AA+K + GYTED++VS D VG S S+F A K V + VK VSWYDNE Y++++V + + AK Sbjct: 229 GNAQRVPVPTGSVTELISVLKKNVTVEEINAAMKEAANESF----GYTEDEIVSADVVGISYGSLFDATLTKIVDVDGSQLVKTVSWYDNEMSYTSQLVRTLEYFAK 331
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: E4PD_EDWI9 (D-erythrose-4-phosphate dehydrogenase OS=Edwardsiella ictaluri (strain 93-146) GN=epd PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.145e-11 Identity = 33/103 (32.04%), Postives = 59/103 (57.28%), Query Frame = -3 Query: 340 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 648 ++ RVPT++V+ +DL+V + +++ ++ + GI+ YTE +VSTDF D S+I V + +K + W DNEWG++ R++D + MA+ Sbjct: 233 ISVRVPTLNVTAIDLSVSVRTPVRVEQVNHLLQKAASTAFHGIVDYTELPLVSTDFNHDPHSAIVDGTQTRVSGRHLIKTLVWCDNEWGFANRMLDTTLAMAR 335
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P1_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MW2) GN=gapA1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.495e-11 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 340 GMAFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLS---KKFVKLVSWYDNEWGYSTRVVDLIVHMAK 651 G A RVP S+ +LTV LEK D + +++ A+K S GYTED++VS+D VG + S+F A V+S ++ VK+ +WYDNE Y+ ++V + ++A+ Sbjct: 230 GGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESF----GYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAE 333
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P1_STAAU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus GN=gapA1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.495e-11 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 340 GMAFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLS---KKFVKLVSWYDNEWGYSTRVVDLIVHMAK 651 G A RVP S+ +LTV LEK D + +++ A+K S GYTED++VS+D VG + S+F A V+S ++ VK+ +WYDNE Y+ ++V + ++A+ Sbjct: 230 GGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESF----GYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAE 333
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P1_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MSSA476) GN=gapA1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.495e-11 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 340 GMAFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLS---KKFVKLVSWYDNEWGYSTRVVDLIVHMAK 651 G A RVP S+ +LTV LEK D + +++ A+K S GYTED++VS+D VG + S+F A V+S ++ VK+ +WYDNE Y+ ++V + ++A+ Sbjct: 230 GGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESF----GYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAE 333
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P1_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MRSA252) GN=gapA1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.495e-11 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 340 GMAFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLS---KKFVKLVSWYDNEWGYSTRVVDLIVHMAK 651 G A RVP S+ +LTV LEK D + +++ A+K S GYTED++VS+D VG + S+F A V+S ++ VK+ +WYDNE Y+ ++V + ++A+ Sbjct: 230 GGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESF----GYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAE 333
BLAST of CB304393 vs. ExPASy Swiss-Prot
Match: G3P1_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain N315) GN=gapA1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.495e-11 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 340 GMAFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSIFGAKAGIVLS---KKFVKLVSWYDNEWGYSTRVVDLIVHMAK 651 G A RVP S+ +LTV LEK D + +++ A+K S GYTED++VS+D VG + S+F A V+S ++ VK+ +WYDNE Y+ ++V + ++A+ Sbjct: 230 GGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESF----GYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAE 333 The following BLAST results are available for this feature:
BLAST of CB304393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304393 ID=CB304393; Name=CB304393; organism=Citrus sinensis; type=EST; length=653bpback to top |