CB304429

Overview
NameCB304429
Unique NameCB304429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:254..939. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304429 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.576e-37
Identity = 76/157 (48.41%), Postives = 106/157 (67.52%), Query Frame = -2
Query:  215 GLAKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 685
            GL  P NT+   GV  + ANV   PGLNTLG+S   +++AP G  PPH HPRA+E  +V+EG+++VGF+T+   NNTL +KVLN G++FV P+GL+HFQ+N+GK  A   ++ NSQ PG   +  T+FG+NP+I    L K F+ D   V  L++KF
Sbjct:   65 GLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTT---NNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFRTDDVTVNKLKSKF 218          
BLAST of CB304429 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.576e-37
Identity = 81/158 (51.27%), Postives = 104/158 (65.82%), Query Frame = -2
Query:  215 GLAKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 685
            GLA    TAN  +G   T ANVE++PGLNTLG+S  RIDYAP G  PPH+HPRASE   VLEG L+VGF+T+      LI+K +NKGDVFVFP+ L+HFQ N  K  A+  +A +SQ PG   +  ++FG+NP I  D L KAF      ++ ++ KF
Sbjct:   61 GLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTT---TGKLISKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGSNPPIPDDLLAKAFGAAAPEIQKIKGKF 215          
BLAST of CB304429 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.495e-36
Identity = 81/158 (51.27%), Postives = 103/158 (65.19%), Query Frame = -2
Query:  215 GLAKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 685
            G+ KP    N +G   T ANVE+I GLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N L AK + KG+VFVFP+GLIH+Q N  K   A+  SA NSQ PG  +IA T+F A P+I    L   FQ+  K ++ +++KF
Sbjct:   61 GIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITT---ANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKF 215          
BLAST of CB304429 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.115e-35
Identity = 75/160 (46.88%), Postives = 105/160 (65.62%), Query Frame = -2
Query:  203 LAKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 682
            LAK GNT+   G   TD NV + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+     NSQ P  V +  T+FG+NP I    L KA +++  +V+ L++KF  G+
Sbjct:   65 LAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRVEAGVVELLKSKFAGGS 224          
BLAST of CB304429 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 74/159 (46.54%), Postives = 107/159 (67.30%), Query Frame = -2
Query:  206 LAKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 682
            LAK GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++ ++V+ L++KF  G
Sbjct:   65 LAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEARVVELLKSKFAAG 223          
BLAST of CB304429 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.713e-35
Identity = 78/163 (47.85%), Postives = 113/163 (69.33%), Query Frame = -2
Query:  215 GLAKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYG-QRPPHIHPRASEIFLVLEGTLYVGFV--TSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG-ANPSINPDFLGKAFQLDPKIVKDLQNKF 685
            GL KP +  + N +G   T A VE+IPGLNTLG+S  R+DYAP+G   PPH HPRA+EI  V +G L VGFV  T+   ++ LI +V+ KG VFVFP+GL+H++ ++G+  A A SA +SQ PG    AD +FG ++P++  D L +AFQ+D  +V+++++KF
Sbjct:   70 GLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSSSPAVPTDVLARAFQVDGGVVENIKSKF 232          
BLAST of CB304429 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.050e-34
Identity = 73/159 (45.91%), Postives = 106/159 (66.67%), Query Frame = -2
Query:  206 LAKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 682
            LAK GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPH+HPRA+EI +V++G L VG + S    N L ++V+  G+ F+ P+GL+HFQFN+GKT A+   + NSQ PG V +  T+FG+NP I    L KA +++  +V+ L++KF  G
Sbjct:   65 LAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRVEAGVVELLKSKFAAG 223          
BLAST of CB304429 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.989e-34
Identity = 73/160 (45.62%), Postives = 105/160 (65.62%), Query Frame = -2
Query:  203 LAKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 682
            L K GNT+   G   T+ +V + PG NTLG+S  R+D+AP G  PPHIHPRA+EI +V++G L VG + S    N L ++V+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG++P I    L KA +++  +V+ L++KF  G+
Sbjct:   42 LTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS 201          
BLAST of CB304429 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.989e-34
Identity = 74/157 (47.13%), Postives = 100/157 (63.69%), Query Frame = -2
Query:  215 GLAKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 685
            GLA   +T NR G + T AN E  PGLNTLG+S  R+D AP G  P H HPRA+E+  V+ G +  GFV++        +KVL +G+ FV P+G+IHFQ+N+G   A   +A NSQ PG V    T+FG++P I    L K+FQ+D KI+K L++KF
Sbjct:   72 GLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVSTA---GEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF 225          
BLAST of CB304429 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.210e-34
Identity = 75/129 (58.14%), Postives = 89/129 (68.99%), Query Frame = -2
Query:  299 GLAKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG 685
            GLAKPG T N  G   T ANV  IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEGTL VGF+T+    N LI++ L KGDVF FP+GL+HFQ N G   A+  +A NSQ PG  ++  T+FG
Sbjct:   62 GLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTT---ANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFG 187          
The following BLAST results are available for this feature:
BLAST of CB304429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLT2_ARATH6.576e-3748.41Germin-like protein subfamily T member 2 OS=Arabid... [more]
GL23_ARATH6.576e-3751.27Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL24_ARATH9.495e-3651.27Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
GER3_WHEAT2.115e-3546.88Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GER2_WHEAT2.763e-3546.54Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
GL14_ORYSJ4.713e-3547.85Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
OXO2_HORVU1.050e-3445.91Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
OXO1_HORVU3.989e-3445.63Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL38_ORYSJ3.989e-3447.13Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL21_ARATH5.210e-3458.14Germin-like protein subfamily 2 member 1 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IIIaR_F11 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IIIaR_F11 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304429 ID=CB304429; Name=CB304429; organism=Citrus sinensis; type=EST; length=686bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAATAAAAACAATAACAAT
TATGTTTATTACATGGCCACAGTCAGCCTGGAGAGAGGTTCATGAGAGAC
CTCTTTTATTACATTAATTAAGATATGATAATCTGGAGATAAAGTAATAC
AGCCACTAGTGAAGAGGCCATTTATATTAAAGCTCATTAATTCCTTCTCC
TAATTGCCATTAATGAACTTATTTTGAAGATCTTTCACTATCTTTGGGTC
CAACTGGAATGCCTTGCCAAGAAAATCGGGATTGATTGAAGGATTGGCTC
CAAAGACTGTGTCGGCTATGGTAACTTCACCCGGGAATTGGCTGTTTAGA
GCAGAATAGGCAGCTGCATTTGTTTTTCCAATGTTGAATTGGAAGTGAAT
CAAACCTTGTGGAAACACAAAAACATCTCCCTTATTTAGAACTTTTGCGA
TGAGTGTGTTATTCAGTTGGTCTGATGTCACAAAACCGACATAAAGAGTT
CCTTCCAGGACTAAGAAGATTTCGCTGGCACGGGGGTGAATGTGAGGTGG
CCTTTGGCCATATGGTGCATAGTCAATACGGAATGCTGATATGCCAAGGG
TGTTGAGTCCTGGAATTTGCTCAACATTTGCATCTGTTTCATCAACACCA
AGTCGATTTGCTGTGTTTCCAGGCTTGGCTAGCCCT
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