CB304435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS15B_SCHPO (40S ribosomal protein S15-B OS=Schizosaccharomyces pombe GN=rps15b PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.876e-46 Identity = 89/137 (64.96%), Postives = 105/137 (76.64%), Query Frame = -1 Query: 160 KRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 570 KRTF+ F++RGV+L+ LLD+S ++LV LF ARARRR RGL I EKP V+THLRNMII+PEM+GS++G+YNGK FNQVEI+PEMIGHYL EFSI+YKP KHGRPGIGATHSSRFIPLK Sbjct: 18 KRTFRTFAYRGVELEQLLDLSAEQLVDLFHARARRRMLRGLGPNASRFIRKLRKAKSEAPLNEKPATVKTHLRNMIILPEMVGSVVGIYNGKLFNQVEIRPEMIGHYLGEFSITYKPTKHGRPGIGATHSSRFIPLK 154
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS15A_SCHPO (40S ribosomal protein S15-A OS=Schizosaccharomyces pombe GN=rps15a PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 5.459e-46 Identity = 88/137 (64.23%), Postives = 105/137 (76.64%), Query Frame = -1 Query: 160 KRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 570 KR+F+ F++RGV+L+ LLD+S ++LV LF ARARRR RGL I EKP V+THLRNMII+PEM+GS++G+YNGK FNQVEI+PEMIGHYL EFSI+YKP KHGRPGIGATHSSRFIPLK Sbjct: 17 KRSFRTFAYRGVELEQLLDLSAEQLVDLFHARARRRMLRGLGPNASRFIRKLRKAKTEAPLNEKPATVKTHLRNMIILPEMVGSVVGIYNGKLFNQVEIRPEMIGHYLGEFSITYKPTKHGRPGIGATHSSRFIPLK 153
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS15_YEAST (40S ribosomal protein S15 OS=Saccharomyces cerevisiae GN=RPS15 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 8.157e-42 Identity = 83/137 (60.58%), Postives = 99/137 (72.26%), Query Frame = -1 Query: 160 KRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 570 KR FK S+RGVDL+ LL+MS ++ VKL AR RRRF RG+ KP + EKP PVRTH+RNMIIVPEMIGS++G+YNGK FNQVEI+PEM+GHYL EFSI+Y PV+HGR G +SRFIPLK Sbjct: 9 KRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAAPENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGRAG---ATTSRFIPLK 142
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS15_DICDI (40S ribosomal protein S15 OS=Dictyostelium discoideum GN=rps15 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.100e-41 Identity = 82/138 (59.42%), Postives = 101/138 (73.19%), Query Frame = -1 Query: 160 KRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXP-GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 570 KRTFKKF++ GV L++LLD+ ++L+ L RARR+ +R K + + GEKP V+TH RN++IVPEMIGS+IG+YNGK FNQVE+KPEMIGHY EFS+SYK V HGRPGIGATHSSRFIPLK Sbjct: 7 KRTFKKFTYSGVALESLLDLKEEQLISLLRCRARRKLRRETPIKHVNFLKKCRASKAAVTQVGEKPALVKTHARNILIVPEMIGSVIGIYNGKVFNQVEVKPEMIGHYTGEFSLSYKSVNHGRPGIGATHSSRFIPLK 144
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS156_ARATH (40S ribosomal protein S15-6 OS=Arabidopsis thaliana GN=RPS15F PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 5.846e-40 Identity = 87/143 (60.84%), Postives = 104/143 (72.73%), Query Frame = -1 Query: 160 KRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEK--PEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGA----THSSRFIPLK 570 KRTFKKFSFRG ++DALL MSN +L KLF+AR RRRF RGLK++P+ LI K PE V+THLRNMIIVPEMIGS++GV+NGK FN++ IKPEMIGHYLAEFS++ K V H RP I S+RFIPL+ Sbjct: 18 KRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEASDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKKVNHHRPRICGCCCFRRSTRFIPLR 160
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS15_NAEGR (40S ribosomal protein S15 (Fragment) OS=Naegleria gruberi GN=RPS15 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.484e-30 Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = -1 Query: 160 MSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 513 M NDEL LF++ RR +G+ +K LI GEKP+ V+THLR+MII+P MIG +IGVY GK + VEIKPEM+G L++FS++Y+PVKHG+P IGAT SS F+PLK Sbjct: 3 MENDELKNLFTSALRRIIGKGISKKYKTLIEKAQKKRDTAPYGEKPDAVKTHLRDMIILPSMIGCVIGVYQGKDYVSVEIKPEMVGMKLSDFSLTYRPVKHGKPSIGATSSSGFVPLK 120
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_THEGJ (30S ribosomal protein S19P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps19p PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.555e-29 Identity = 65/133 (48.87%), Postives = 88/133 (66.17%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 K+F +RG LD LL+MS +E KL AR RR +RGL + L+ G+ +P+RTH R+MI++PEM+G I V+NGK F +EIKPEMIGHYL EF+++ K V+HG PG+GAT SS F+ +K Sbjct: 5 KEFRYRGYTLDELLNMSLEEFAKLLPARQRRSLKRGLSPEQKKLLRKIRLAKK----GKYNKPIRTHSRDMIVLPEMVGITIHVHNGKEFVPIEIKPEMIGHYLGEFALTRKIVQHGSPGVGATRSSMFVAVK 133
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_PYRFU (30S ribosomal protein S19P OS=Pyrococcus furiosus GN=rps19p PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.555e-29 Identity = 66/133 (49.62%), Postives = 89/133 (66.92%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 K+F +RG L+ L++MS +EL +LF AR RR +RGL + L+ G+ +P+RTH R+MII+PEM+G I V+NGK F VEIKPEMIGHYL EF+ + K V+HG PG+GAT SS F+ +K Sbjct: 4 KEFRYRGYTLEQLMNMSLEELARLFPARQRRSLKRGLTPEQKKLLRKIRLAKK----GKYKKPIRTHCRDMIILPEMVGLTIYVHNGKEFVPVEIKPEMIGHYLGEFAPTRKKVEHGAPGVGATRSSMFVAVK 132
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_PYRKO (30S ribosomal protein S19P OS=Pyrococcus kodakaraensis GN=rps19p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.034e-28 Identity = 65/133 (48.87%), Postives = 87/133 (65.41%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 K+F +RG LD LL+MS +E KL +R RR +RGL + L+ G+ +P+RTH R+MI++PEM+G I VYNGK F VEIK EMIGHYL EF+++ K V+HG PG+GAT SS F+ +K Sbjct: 5 KEFRYRGYTLDELLNMSLEEFAKLLPSRQRRSLKRGLSPEQKKLLRKIRLAKK----GKYNKPIRTHSRDMIVLPEMVGMTIHVYNGKEFVPVEIKEEMIGHYLGEFAMTRKVVQHGSPGVGATRSSMFVAVK 133
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_PYRAB (30S ribosomal protein S19P OS=Pyrococcus abyssi GN=rps19p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.351e-28 Identity = 66/133 (49.62%), Postives = 88/133 (66.17%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 K+F +RG L+ L++MS +EL KL AR RR +RGL + L+ G+ +P+RTH R+MI++PEM+G I V+NGK F VEIKPEMIGHYL EF+ + K V+HG PGIGAT SS F+ +K Sbjct: 4 KEFRYRGYTLEQLMNMSLEELAKLLPARQRRSLKRGLTPEQKKLLRKIRLAKK----GKYNKPIRTHCRDMIVLPEMVGLTIYVHNGKEFVPVEIKPEMIGHYLGEFAPTRKRVQHGAPGIGATRSSMFVAVK 132 The following BLAST results are available for this feature:
BLAST of CB304435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304435 ID=CB304435; Name=CB304435; organism=Citrus sinensis; type=EST; length=570bpback to top |