CB304435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_AERPE (30S ribosomal protein S19P OS=Aeropyrum pernix GN=rps19p PE=3 SV=3) HSP 1 Score: 116.701 bits (291), Expect = 8.195e-26 Identity = 63/136 (46.32%), Postives = 83/136 (61.03%), Query Frame = -1 Query: 160 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPG--EKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 561 +KKF +RG L+ LL M +EL +LF AR RR RGL L+ G ++P +RTH+R+M+I+PEM+G I VYNGK F V+I PEMIGHYL EFS + + V+HG PG+ AT SS + K Sbjct: 9 WKKFRYRGRTLEELLKMDIEELARLFPARQRRSLLRGLTPAQQKLLLKVRKIRRRLEEGRLKRPPVIRTHVRDMVILPEMVGLTIAVYNGKEFIPVKIVPEMIGHYLGEFSPTTRIVQHGEPGLKATRSSLHVASK 144
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_METS5 (30S ribosomal protein S19P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps19p PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.398e-25 Identity = 57/134 (42.54%), Postives = 83/134 (61.94%), Query Frame = -1 Query: 160 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 561 +KKF +RG L+ LL+M D+ +KL AR RR ++G LI + +P++TH+R+++I+PEM+G VYNGK F + ++ PEMIGHYL EFSI + V+HG PG+ AT SS F+ +K Sbjct: 9 WKKFRYRGKSLEELLNMPMDDFIKLLPARQRRSLRKGFTPSERTLIEKIRKIRRD---SKADKPIKTHVRSLVILPEMVGLKFAVYNGKQFVEFQVVPEMIGHYLGEFSIPIQKVEHGEPGLKATRSSLFMAMK 139
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_THEAC (30S ribosomal protein S19P OS=Thermoplasma acidophilum GN=rps19p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.114e-25 Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 K+F+++G L+ L MS +EL+K+ ARARR R + L+ E V+TH+R++II+P +G I+ VYNG ++ + EIKPEMIGHYL EF ++ K VKH PG+GAT SS+F+PLK Sbjct: 28 KEFTYKGYSLEDLQKMSMEELIKILPARARRTLLREPNYEQKKLMEKLE---------SDEEDVKTHVRDVIILPNYVGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPLK 151
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_SULSO (30S ribosomal protein S19P OS=Sulfolobus solfataricus GN=rps19p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.067e-25 Identity = 57/134 (42.54%), Postives = 83/134 (61.94%), Query Frame = -1 Query: 160 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 561 +K F +RG +D LL+M DE +KL +R RR +RG L+ G+ + ++TH+RN++I+PE+IG + VYNGK F + + PEMIGHYL E+SI+ K V+HG PG+ AT SS F+ +K Sbjct: 9 WKNFKYRGKSIDELLNMPMDEFIKLLPSRQRRSLKRGFTDAQRHLLEKVRKYRRE---GKFNKTIKTHVRNLVILPELIGLKMAVYNGKEFVEFTVTPEMIGHYLGEYSITTKKVEHGEPGLKATRSSLFLAMK 139
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_IGNH4 (30S ribosomal protein S19P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps19p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.067e-25 Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = -1 Query: 160 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 561 +KKF +RG L+ LL+M D+ ++L AR RR +RG L+ G+K + +RTH+R+M+I+P M+G I VYNGK F V+I PEMIGHYL EFS + VKHG PG+ AT SS F+ K Sbjct: 7 WKKFRYRGKTLEELLEMPLDDFIELLPARQRRSLKRGFNDAQRRLLEKVLKARKEMEKGKKVK-IRTHVRDMVILPIMVGLTIEVYNGKEFVPVKIVPEMIGHYLGEFSHTTAVVKHGEPGLKATRSSLFVAAK 139
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_ARCFU (30S ribosomal protein S19P OS=Archaeoglobus fulgidus GN=rps19p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.312e-25 Identity = 57/133 (42.86%), Postives = 82/133 (61.65%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 + F +RG L+ L M +EL KL AR RR+ +RG + L+ K RTH R+M+++PEM+G ++ V+NGK F +VEIKPEMIGH L EF+++ + KH PG+GAT SS+++PLK Sbjct: 11 RDFKYRGYTLEELQKMPLEELAKLLPARERRKIKRGFTEQEEKLLRKL----------RKKGTARTHCRDMVVLPEMVGKVVFVHNGKEFVRVEIKPEMIGHRLGEFALTRRFEKHSGPGVGATRSSKYVPLK 133
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_HALWD (30S ribosomal protein S19P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps19p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.183e-24 Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = -1 Query: 160 KFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 555 +F++RG LD L MS +++ L AR RR +RGL + L + P+RTHLR+M I+P + I VYNG++F +V I+PEMIGHYL EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 12 EFTYRGHTLDELQAMSLEDITALLPARQRRTIERGLTTEQQKLRETVRDADPQKTAND---PIRTHLRDMPILPSFVEKTIAVYNGQSFERVRIEPEMIGHYLGEFQLTRTSVEHGQAGIGATRSSKFVPLK 140
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_KORCO (30S ribosomal protein S19P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps19p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.019e-24 Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 ++F +RG L+ L M+ DEL + +R RR +RGL + L+ + +RTH R+M I+PEM+GS I V+NGK F ++ I PEMIGHYL EF+++ + V+HG+PG GAT SS+F+PLK Sbjct: 4 REFRYRGYTLEQLQTMTLDELANVMPSRIRRTLKRGLSIENKKLLDKIRKYKAMGID----KVIRTHRRDMPILPEMVGSKIAVHNGKEFVEITIVPEMIGHYLGEFAMTNRIVRHGKPGKGATRSSKFVPLK 132
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_CENSY (30S ribosomal protein S19P OS=Cenarchaeum symbiosum GN=rps19p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.019e-24 Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 KKF +RG + L M D L +LF++R RR RG+ LI G++ P++THLR++I++P M G + V++GK F VEI EMIGHYL E+ I+ K V HG PG+GA+ SS ++PLK Sbjct: 3 KKFEYRGKPAEELESMPLDSLFRLFNSRQRRSLTRGITDGKRKLIREIKDARA----GKEGNPIKTHLRDLIVLPSMTGVTVNVFSGKEFRPVEITTEMIGHYLGEYVITNKRVSHGAPGVGASRSSLYVPLK 131
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_THEPD (30S ribosomal protein S19P OS=Thermofilum pendens (strain Hrk 5) GN=rps19p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.636e-24 Identity = 58/136 (42.65%), Postives = 83/136 (61.03%), Query Frame = -1 Query: 160 KFSFRGVDLDALLDMSNDELVKLFSARARRR----FQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 555 KF++RG L+ L M ++L ++ AR RR F++G + + L+ G+K ++THLR+ II+PEM+G I V+NGK F VEI PE IGHYL EF+++ K V+HG PG+ AT SS F+ LK Sbjct: 6 KFTYRGYTLEELRQMPIEKLAEIMPARQRRSLLRVFKQGTSEEHLKLLEKIRRAAKLASEGKKQPVIKTHLRDFIILPEMVGLTIHVHNGKEFVPVEITPEKIGHYLGEFALTTKKVEHGEPGLKATRSSMFVALK 141 The following BLAST results are available for this feature:
BLAST of CB304435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304435 ID=CB304435; Name=CB304435; organism=Citrus sinensis; type=EST; length=570bpback to top |