CB304435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_METST (30S ribosomal protein S19P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps19p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.636e-24 Identity = 55/133 (41.35%), Postives = 81/133 (60.90%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 K F FRG L+ L +MS DE+++L +R RR +RG + ++ +P ++TH R+MI++P M+G G+YNG+ F +V I+PEMIG Y EF+ + V+HG PG+GAT SS F+PLK Sbjct: 4 KIFKFRGYTLEELQEMSLDEVIELLPSRQRRSLKRGFLPRQEKVLDKMEKVKDMKNDSGRPIVIKTHCRDMIVLPNMVGYTFGIYNGQEFVEVTIQPEMIGCYFGEFAQTRGRVQHGDPGMGATRSSMFVPLK 136
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_PYRAE (30S ribosomal protein S19P OS=Pyrobaculum aerophilum GN=rps19p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.873e-24 Identity = 62/131 (47.33%), Postives = 80/131 (61.07%), Query Frame = -1 Query: 160 FSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 552 F +RG L+ LL+MS DE +KL AR RR +RGLK + L+ G+K +RTH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+++ K V+HG PG+ AT SS I K Sbjct: 29 FRYRGKTLEELLNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKVV-IRTHCRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLHIAAK 158
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_NITMS (30S ribosomal protein S19P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps19p PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.232e-23 Identity = 54/133 (40.60%), Postives = 84/133 (63.16%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 K+F++RG+ + L +MS ++L +LF+AR RR RG+ LI G+ P++TH+R++II+P M+ + V++GK F V I+ EMIGHYL E+ I+ + V HG PG+GA+ SS ++PLK Sbjct: 3 KEFAYRGIPKEELDNMSLEKLFQLFNARQRRSLTRGITDGKRKLIEEIKAAKA----GKLKNPIKTHVRDLIILPYMVDVTVNVFSGKEFRPVTIRTEMIGHYLGEYVITNRKVSHGAPGVGASRSSLYVPLK 131
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_PYRIL (30S ribosomal protein S19P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps19p PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.915e-23 Identity = 61/131 (46.56%), Postives = 79/131 (60.31%), Query Frame = -1 Query: 160 FSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 552 F +RG L+ LL+M DE +KL AR RR +RGLK + L+ G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+I+ K V+HG PG+ AT SS I K Sbjct: 31 FRYRGKTLEELLNMPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKKLMAQGKKVV-IKTHCRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFAITTKIVQHGEPGLKATRSSLHIAAK 160
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_METTP (30S ribosomal protein S19P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps19p PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.915e-23 Identity = 56/136 (41.18%), Postives = 84/136 (61.76%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLK---RKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 ++F++RG + L M +E+ +L +R RR +RGL RK MA + +THLR+ I++PEM+G ++ ++NGKTF +VEI PEMIGHYL E++++ V HG G+GAT SS+F+PLK Sbjct: 14 EEFTYRGYRVSELAKMRLEEIAELLPSRQRRTLRRGLSKEHRKFMAKLRARGT-------------AKTHLRDAIVLPEMVGKVVEIHNGKTFQRVEIIPEMIGHYLGEYALTRARVIHGAAGVGATRSSKFVPLK 136
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_PYRAR (30S ribosomal protein S19P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps19p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.807e-23 Identity = 60/131 (45.80%), Postives = 79/131 (60.31%), Query Frame = -1 Query: 160 FSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 552 F +RG L+ LL+M DE +KL AR RR +RGLK + L+ G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+++ K V+HG PG+ AT SS I K Sbjct: 30 FRYRGKTLEELLNMPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKVV-IKTHCRDMIILPEMVGLTIQVYNGITYIPVYISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLHIAAK 159
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_CALMQ (30S ribosomal protein S19P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps19p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.807e-23 Identity = 61/134 (45.52%), Postives = 78/134 (58.21%), Query Frame = -1 Query: 160 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 561 +K F +RG D L+ M +E +KL AR RR +RGL+ L+ G K PVRTH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+I+ K V+HG PG+ AT S+ I K Sbjct: 55 WKNFKYRGFTFDELMKMPMNEFIKLLPARQRRTLKRGLRPCHRQLLEKIRKAKAFAAKG-KSIPVRTHCRDMIILPEMVGLTIFVYNGITYIPVPISPWHIGHYLGEFAITTKIVQHGEPGLKATKSTLHIAAK 187
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_NANEQ (30S ribosomal protein S19P OS=Nanoarchaeum equitans GN=rps19p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.493e-23 Identity = 59/133 (44.36%), Postives = 75/133 (56.39%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 K+F ++G L L MS +EL K+ AR RR R LK G+ +P++TH RN II+P M+G + VYNGK + V+IKPEMIGHYL EFS + K KH PGIGAT SS + K Sbjct: 8 KEFRYKGYTLQELEQMSLEELAKIMPARQRRTLLRRLKFGWSDQQKKLFKKILLAKEGKYKKPIKTHARNTIILPFMVGVTVHVYNGKEYVPVQIKPEMIGHYLGEFSFTTKRPKHSAPGIGATRSSAHVSKK 140
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_THENV (30S ribosomal protein S19P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps19p PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.481e-23 Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = -1 Query: 160 FSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 552 F +RG L+ LL++ DE +KL AR RR +RGLK + L+ G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+++ K V+HG PG+ AT SS I K Sbjct: 29 FRYRGKTLEELLNLPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKVT-IKTHSRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKVVQHGEPGLKATRSSLHIAAK 158
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_PYRCJ (30S ribosomal protein S19P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps19p PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.481e-23 Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = -1 Query: 160 FSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 552 F +RG L+ LL+M DE +KL AR RR +RGLK + L+ G+K ++TH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+++ + V+HG PG+ AT SS I K Sbjct: 29 FRYRGKTLEELLNMPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLMAQGKKVT-IKTHCRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTRIVQHGEPGLKATRSSLHIAAK 158 The following BLAST results are available for this feature:
BLAST of CB304435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304435 ID=CB304435; Name=CB304435; organism=Citrus sinensis; type=EST; length=570bpback to top |