CB304435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_METBF (30S ribosomal protein S19P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps19p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.145e-20 Identity = 50/132 (37.88%), Postives = 79/132 (59.85%), Query Frame = -1 Query: 160 KFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 555 ++++RG + L ++S +E +L +R RR +RG ++ ++ + VRTH R++II+PEMIG I ++NGK F V+++PEMIGH EF+ + V HG G+GAT SS+F+PLK Sbjct: 15 EYTYRGKTVSELQELSLEEFAELLPSRERRSIKRGFTDGQKKVLHEF----------KEGKKVRTHHRDLIILPEMIGQTIEIHNGKGFVSVDLQPEMIGHRFGEFAPTRSRVSHGSAGVGATRSSKFVPLK 136
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_METVS (30S ribosomal protein S19P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps19p PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.720e-20 Identity = 45/132 (34.09%), Postives = 73/132 (55.30%), Query Frame = -1 Query: 160 KFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 555 +F ++G L L +M + +++ AR RR RG+ L+ G++P +RTH R+ +I PEMIG I +Y GK F ++++ E +G +L E + + V+HG PG+GAT S F+P+K Sbjct: 29 EFKYKGFTLPELQEMPIKKFIEIVPARQRRTMSRGITPNQRKLVMKIKKARRLVNRGKEPRVIRTHCRDFVITPEMIGLTISIYTGKQFKEIKLVEETLGRFLGEMAPTRGIVQHGSPGMGATRGSMFVPIK 160
BLAST of CB304435 vs. ExPASy Swiss-Prot
Match: RS19_METLZ (30S ribosomal protein S19P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps19p PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.776e-20 Identity = 51/133 (38.35%), Postives = 79/133 (59.40%), Query Frame = -1 Query: 160 KKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIXXXXXXXXXXXPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 558 +++++ G +++ L MS DEL+ + + ARR+ RG R + + + VRTH R+MII+PEM+G + +Y+GK F VEI E + HY EF+++ K V HG GIGAT SS+++PLK Sbjct: 14 EEYTYHGYNIEQLKAMSMDELLAIMPSGARRKVLRGFTRDEEDVRAKIA----------EGDGVRTHSRSMIILPEMVGKNVAIYSGKEFINVEIPVEGVFHYFGEFALTRKKVTHGSAGIGATKSSKYVPLK 136 The following BLAST results are available for this feature:
BLAST of CB304435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304435 ID=CB304435; Name=CB304435; organism=Citrus sinensis; type=EST; length=570bpback to top |