CB304453

Overview
NameCB304453
Unique NameCB304453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.300e-25
Identity = 54/107 (50.47%), Postives = 80/107 (74.77%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            DKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++ +V+    G KLD ADK  + D  ++ I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q
Sbjct:  504 DKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQ 609          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.300e-25
Identity = 54/107 (50.47%), Postives = 80/107 (74.77%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            DKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++ +V+    G KLD ADK  + D  ++ I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q
Sbjct:  504 DKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQ 609          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.897e-25
Identity = 53/108 (49.07%), Postives = 82/108 (75.93%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            D+ RLS ++IE+M+ +AEK+  +D++ K K EA+N LE+YAYN++N ++D EK+G KLD  DKK IE+A+++AI WL SN  A A+E + + K+LES   PI++K+Y+
Sbjct:  534 DQNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.897e-25
Identity = 47/106 (44.34%), Postives = 80/106 (75.47%), Query Frame = -2
Query:  313 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMY 630
            DKGRLSK+E+E+MV+EAE+YKAEDE  + +V AKN+LE + ++++ ++++E +  K+   D+ K++D   + + WL+ NQLA+ +E+E + +ELE IC PI +++Y
Sbjct:  508 DKGRLSKEEVERMVREAEQYKAEDEAQRDRVAAKNSLETHVFHVKGSLQEESLRDKIPKEDRHKVQDKCQEVLAWLEHNQLADKEEYEHQKRELEQICRPIFSRLY 613          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 2.897e-25
Identity = 52/107 (48.60%), Postives = 79/107 (73.83%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            DKGRLSK++IEKMV EAEK+K EDE+  +++ +KN LE+ AY+++NT+ +   G KL+ ADK  +    ++ I WLDSN  A  +EF+ ++KEL+ + NPI++K+YQ
Sbjct:  503 DKGRLSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNTISE--AGDKLEQADKDAVTKKAEETIAWLDSNTTATKEEFDDQLKELQEVANPIMSKLYQ 607          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.783e-25
Identity = 48/106 (45.28%), Postives = 80/106 (75.47%), Query Frame = -2
Query:  313 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMY 630
            DKGRLSK+E+E+MV EAE+YKAEDE  + +V AKN+LE + ++++ ++++E +  K+   D++K++D   + + WL+ NQLAE +E+E + +ELE IC PI +++Y
Sbjct:  508 DKGRLSKEEVERMVHEAEQYKAEDEAQRDRVAAKNSLEAHVFHVKGSLQEESLRDKIPEEDRRKMQDKCREVLAWLEHNQLAEKEEYEHQKRELEQICRPIFSRLY 613          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP70_SCHJA (Heat shock 70 kDa protein (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.783e-25
Identity = 51/106 (48.11%), Postives = 81/106 (76.42%), Query Frame = -2
Query:  316 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKK-KIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKM 630
            DKGRLSK+EI++M+ EA++YK+EDE+ K ++ AKN+LE+Y Y+M+ +V+ +++  K+  +D+K +I    ++ I+W+D+NQLAE +EFE K  ELE +C PII  M
Sbjct:   61 DKGRLSKEEIDRMINEADRYKSEDEKQKNRICAKNSLESYVYSMKQSVEGDEMKDKISESDRKNRILSKCEETIRWMDNNQLAEKEEFEEKKSELEKVCMPIITAM 166          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.941e-25
Identity = 51/106 (48.11%), Postives = 75/106 (70.75%), Query Frame = -2
Query:  313 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMY 630
            DKGRLSK+EI++MV EAEKYK EDE+   ++ AKN LE+YAY+++ T  +++   K+D + ++ +  AI++ I WLD+NQ A  DE+E K KELE I N  +  +Y
Sbjct:  506 DKGRLSKEEIDRMVAEAEKYKEEDEKEAARIAAKNGLESYAYSLKQTASEKQFEEKVDASKRESLNKAIEETISWLDNNQSATTDEYEDKRKELEGIANDALKDLY 611          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 6.453e-25
Identity = 53/107 (49.53%), Postives = 78/107 (72.90%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            DKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++  V+    G KLD ADK  + D  +  I+WLDSN  AE +EF+ K++EL   C+PI+ KM+Q
Sbjct:  504 DKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQAVEQAPAG-KLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKLEELTRHCSPIMTKMHQ 609          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 6.453e-25
Identity = 53/107 (49.53%), Postives = 78/107 (72.90%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            DKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++  V+    G KLD ADK  + D  +  I+WLDSN  AE +EF+ K++EL   C+PI+ KM+Q
Sbjct:  504 DKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQAVEQAPAG-KLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKLEELTRHCSPIMTKMHQ 609          
The following BLAST results are available for this feature:
BLAST of CB304453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
HSP73_DROME1.300e-2550.47Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROME1.300e-2550.47Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP7C_CAEEL2.897e-2549.07Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP76_SAGOE2.897e-2544.34Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP72_YEAST2.897e-2548.60Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP76_HUMAN3.783e-2545.28Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]
HSP70_SCHJA3.783e-2548.11Heat shock 70 kDa protein (Fragment) OS=Schistosom... [more]
HSP71_PICAN4.941e-2548.11Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP71_DROME6.453e-2549.53Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME6.453e-2549.53Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IIaR_A10 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IIaR_A10 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304453 ID=CB304453; Name=CB304453; organism=Citrus sinensis; type=EST; length=631bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGGACCGAAAAATATTCAT
TATATAAATTGGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAA
GGAAAAATTAATATTCATCCTAAGGCTAAAACAACATAAGATAAAAACCA
AACGTCCAGTTTTCCCACCGTCAAAAAGCCGACCTCCCACAAACACAACA
AAATAAAACTGGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGCGGCA
CTGCCACCAGCTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACC
ACCAGCACCTTGATACATCTTGGCAATGATGGGATTGCAGATGCTCTCAA
GCTCCTTCATCTTGCCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTA
TCAAGCCATTGAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTC
AGCTGGATCAAGTTTGGAGCCGATCTTCTCGTCCTTGACAGTGTTCCTCA
TATTGTAGGCATAGTTTTCCAAGGCATTCTTGGCCTCGACCTTCTTCTTG
TGCTCCTCGTCTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTC
AATTTCATCCTTTGACAATCTACCCTTATCG
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