CB304453

Overview
NameCB304453
Unique NameCB304453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: BIP1_TOBAC (Luminal-binding protein 1 (Fragment) OS=Nicotiana tabacum GN=BIP1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.621e-29
Identity = 56/108 (51.85%), Postives = 87/108 (80.56%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            DKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNM+N + D +K+  KL+  +K+KIE A  +A++WLD NQ AE +++E K+KE+E+ICNPII  +YQ
Sbjct:  162 DKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAICNPIITAVYQ 269          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 1.257e-28
Identity = 60/107 (56.07%), Postives = 81/107 (75.70%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            DKGRLSK+EIEKMV EAEK+K EDE+   +V+AKN LE+YAY+++NT+ +E+  SKLD ++ +++  A D+ I WLDSNQ A  +EF  + KELES  NPI+ K YQ
Sbjct:  504 DKGRLSKEEIEKMVSEAEKFKEEDEKEASRVQAKNQLESYAYSLKNTLGEEQFKSKLDASEIEEVTKAADETIAWLDSNQTATQEEFADQQKELESKANPIMTKAYQ 610          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.257e-28
Identity = 54/107 (50.47%), Postives = 84/107 (78.50%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            DKGRLS++EI++MV+EAEKYK EDE+ +K VE+K+ LENY Y+M+NT+ ++++  KL   +     + I +A++W+++NQLAE DEFE K+K +E +CNP++ K+YQ
Sbjct:  507 DKGRLSQEEIDRMVEEAEKYKEEDEKRRKCVESKHKLENYCYSMKNTLSEDQVKQKLGADEVDNALNTITEALKWVETNQLAEHDEFEDKLKHVEGVCNPLVTKLYQ 613          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.257e-28
Identity = 55/108 (50.93%), Postives = 87/108 (80.56%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            DKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNMRN + D +K+  KL+  +K+KIE A  +A++WLD NQ AE ++++ K+KE+E++CNPII  +YQ
Sbjct:  538 DKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQ 645          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: BIP2_TOBAC (Luminal-binding protein 2 (Fragment) OS=Nicotiana tabacum GN=BIP2 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.257e-28
Identity = 55/108 (50.93%), Postives = 87/108 (80.56%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            DKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNM+N + D +K+  KL+  +K+KIE A  +A++WLD NQ AE +++E K+KE+E++CNPII  +YQ
Sbjct:  162 DKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 269          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: MAG29_DERFA (Allergen MAG29 (Fragment) OS=Dermatophagoides farinae GN=MAG29 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.641e-28
Identity = 56/101 (55.45%), Postives = 79/101 (78.22%), Query Frame = -2
Query:  310 KDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 612
            KD+IE+MV+EAE YK ED++ + ++ AKN+LE YA+ M+ T+ +E I SK+   D+KKI D +D+ ++WLD+N LAE DEFE + KELES+CNPII K+YQ
Sbjct:    1 KDDIERMVKEAESYKEEDDKQRDRIAAKNSLEGYAFQMKATLDEEAIKSKVSEEDRKKILDKVDEVLKWLDANALAEKDEFEHQRKELESVCNPIITKLYQ 101          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.799e-28
Identity = 56/106 (52.83%), Postives = 81/106 (76.42%), Query Frame = -2
Query:  313 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMY 630
            DKGRLSK++IE+M+ +AEKYKAEDE    +++AKN LE+YAY+++NT+ + ++  ++   DKKK+ D ID+ I WLD+NQ AE DE+E + KELE + NPII+  Y
Sbjct:  504 DKGRLSKEDIERMLADAEKYKAEDEAEAARIQAKNGLESYAYSLKNTISEGQL--QISEDDKKKVSDKIDEVISWLDNNQTAEKDEYESQQKELEGVANPIISAAY 607          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.656e-28
Identity = 54/106 (50.94%), Postives = 79/106 (74.53%), Query Frame = -2
Query:  313 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMY 630
            DKGRLSK+EIE+M+ +AEKYK EDE    +++AKN LE+YAY+++NTV D K+  KL   DK+ +  AID+ + W+D NQ A  +E+E + K+LES+ NP++ K+Y
Sbjct:  505 DKGRLSKEEIERMLADAEKYKEEDEAEAGRIQAKNGLESYAYSLKNTVSDPKVEEKLSAEDKETLTGAIDKTVAWIDENQTATKEEYEAEQKQLESVANPVMMKIY 610          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.236e-28
Identity = 54/107 (50.47%), Postives = 79/107 (73.83%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            DKGRLSK++IE+MV +AE Y+  DE+ + ++ AKN LE+Y + +R+T+ DE + S+  PAD++ I+    + I WLD+NQLAE  EFE K +ELE IC+PII ++YQ
Sbjct:  506 DKGRLSKEDIERMVNDAEAYRQADEQQRDRINAKNQLESYCFQLRSTLDDEHLSSRFSPADRETIQQRSSETIAWLDANQLAERQEFEHKQQELERICSPIITRLYQ 612          
BLAST of CB304453 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.236e-28
Identity = 55/108 (50.93%), Postives = 87/108 (80.56%), Query Frame = -2
Query:  310 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEGKMKELESICNPIIAKMYQ 630
            +KGRLS++EI++MV+EAE++  ED++ K+K++A+NALE Y YNM+N V D +K+  KL+  +K+KIE A  +A++WLD NQ +E +E++ K+KE+E++CNPII  +YQ
Sbjct:  537 EKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
The following BLAST results are available for this feature:
BLAST of CB304453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
BIP1_TOBAC9.621e-2951.85Luminal-binding protein 1 (Fragment) OS=Nicotiana ... [more]
HSP72_CANAL1.257e-2856.07Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_THEPA1.257e-2850.47Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
BIP5_TOBAC1.257e-2850.93Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
BIP2_TOBAC1.257e-2850.93Luminal-binding protein 2 (Fragment) OS=Nicotiana ... [more]
MAG29_DERFA1.641e-2855.45Allergen MAG29 (Fragment) OS=Dermatophagoides fari... [more]
HSP70_EMENI2.799e-2852.83Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP70_CLAHE3.656e-2850.94Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP7A_DROME6.236e-2850.47Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
BIP2_ARATH6.236e-2850.93Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IIaR_A10 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IIaR_A10 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304453 ID=CB304453; Name=CB304453; organism=Citrus sinensis; type=EST; length=631bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGGACCGAAAAATATTCAT
TATATAAATTGGTCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAA
GGAAAAATTAATATTCATCCTAAGGCTAAAACAACATAAGATAAAAACCA
AACGTCCAGTTTTCCCACCGTCAAAAAGCCGACCTCCCACAAACACAACA
AAATAAAACTGGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGCGGCA
CTGCCACCAGCTGGAGGAGCATCATCATCCATGCCACCGCCCATATCACC
ACCAGCACCTTGATACATCTTGGCAATGATGGGATTGCAGATGCTCTCAA
GCTCCTTCATCTTGCCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTA
TCAAGCCATTGAATTGCCTGATCAATGGCATCCTCAATCTTCTTCTTGTC
AGCTGGATCAAGTTTGGAGCCGATCTTCTCGTCCTTGACAGTGTTCCTCA
TATTGTAGGCATAGTTTTCCAAGGCATTCTTGGCCTCGACCTTCTTCTTG
TGCTCCTCGTCTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTC
AATTTCATCCTTTGACAATCTACCCTTATCG
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