CB304455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_SYNP2 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=trpA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.585e-17 Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTGAR S++ V LL ++++ T KP+ VGFG+S P +Q+ WGADGVIVGSA+VK L +P EGL +++F +SLK A+ Sbjct: 176 VSVTGVTGARTSVASRVGELLPKLRQVTDKPIGVGFGVSDPAQARQLKEWGADGVIVGSAVVKRLATG-TPAEGLAAVKEFCESLKEAI 263
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_PROMT (Tryptophan synthase alpha chain OS=Prochlorococcus marinus (strain NATL2A) GN=trpA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.752e-16 Identity = 43/88 (48.86%), Postives = 64/88 (72.73%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 535 VS GVTG R+S+ +V +L++++K+S++ P+AVGFGIS +H++QV WGADG IVGSA+VK + A S E ++E F K L++A Sbjct: 178 VSVTGVTGERSSLEDNVGSLVQQLKDSSSSPIAVGFGISDVKHIEQVREWGADGAIVGSALVKRIANA-SIEMKVEEAGSFCKELRAA 264
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_PROM1 (Tryptophan synthase alpha chain OS=Prochlorococcus marinus (strain NATL1A) GN=trpA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.752e-16 Identity = 43/88 (48.86%), Postives = 64/88 (72.73%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 535 VS GVTG R+S+ +V +L++++K+S++ P+AVGFGIS +H++QV WGADG IVGSA+VK + A S E ++E F K L++A Sbjct: 178 VSVTGVTGERSSLEDNVGSLVQQLKDSSSSPIAVGFGISDVKHIEQVREWGADGAIVGSALVKRIANA-SIEMKVEEAGSFCKELRAA 264
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_ANAVT (Tryptophan synthase alpha chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.288e-16 Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTG R+ + G V LL+++++ T KP+ VGFGIS+P QV WGAD IVGSA V+ L +P EGL + +F +SLK+A+ Sbjct: 176 VSVTGVTGMRSQVEGRVLDLLQKVRQVTDKPLGVGFGISQPAQATQVRDWGADAAIVGSAFVQRLATG-TPAEGLSAIAEFCQSLKAAI 263
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_PROMP (Tryptophan synthase alpha chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=trpA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.530e-15 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 535 VS GVTG R + V+ L+ +++E + PVAVGFGIS PEHV +V WGADGVI+GSA VK + + + +E + ++ KF + ++ A Sbjct: 190 VSVTGVTGERNKMENRVENLITKLQEISINPVAVGFGISSPEHVNKVRKWGADGVIIGSAFVKRISNS-NEKEVVNQIGKFCEEMRKA 276
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_PROMM (Tryptophan synthase alpha chain OS=Prochlorococcus marinus (strain MIT 9313) GN=trpA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.316e-15 Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 535 VS GVTG R+ + VQ+L++++K S + PVAVGFGIS P+ V+QV WGADG IVGSA+VK + A +P +E F K L++A Sbjct: 187 VSVTGVTGERSVMEDRVQSLVQQLKLSGSNPVAVGFGISGPQQVRQVRSWGADGAIVGSALVKRMA-AAAPGLVAQEAGLFCKELRNA 273
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_PORPU (Tryptophan synthase alpha chain OS=Porphyra purpurea GN=trpA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.362e-15 Identity = 36/89 (40.45%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS+ GVTG + ++G ++ L IK+ T KP+ +GFGIS E ++++ GW +G+++GSA VK L + PEEGL++++ F + KS + Sbjct: 184 VSTTGVTGQKPELTGKLKRLTETIKKMTQKPIILGFGISTAEQIKEIKGWNINGIVIGSAFVKRL-SSDFPEEGLRKIKDFCTTAKSII 271
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_PROMA (Tryptophan synthase alpha chain OS=Prochlorococcus marinus GN=trpA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.615e-15 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 535 VS GVTG R+++ VQ L+ E++ ++ PVAVGFGIS +HV QV WGADG I+GSA+VK + A + +E +E KF L A Sbjct: 178 VSVTGVTGERSALENRVQLLINELRGFSSTPVAVGFGISDTKHVIQVKRWGADGAIIGSALVKRISNATTGQEA-EEAGKFCSELYKA 264
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_SYNPX (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain WH8102) GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.256e-14 Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL---GEAQSPEEGLKELEKFAKSLKSA 535 VS GVTG RA + V+ L+ E+K+S+ PVAVGFGIS + V+QV WGADG IVGSA+VK + GE Q EE +F + L++A Sbjct: 181 VSVTGVTGERAQMETRVEGLVEELKQSSAVPVAVGFGISGADQVRQVRSWGADGAIVGSALVKRMAAAGEGQIAEEA----GQFCRELRNA 267
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_SYNP6 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=trpA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14 Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTG R + V LL+EI++ T KP+ VGFGIS E +QV WGADGVIVGSA V L E+G++ + + L+ A+ Sbjct: 176 VSVTGVTGMRQGMQSRVADLLQEIRQGTDKPIGVGFGISGAEQARQVRDWGADGVIVGSAFVNRL-----QEQGVEGVATLCRELRQAI 259 The following BLAST results are available for this feature:
BLAST of CB304455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304455 ID=CB304455; Name=CB304455; organism=Citrus sinensis; type=EST; length=535bpback to top |